MELO3C012870 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012870
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Alanine--tRNA ligase
Location	chr4 : 13669708 .. 13670762 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCAGTTCAAGCCCATTTTTTTGGGTACTGTTGATCCTAACACGTCTTTGAGCAAGCTCACCCGAGCTTGTAATACTCAGAAATGTATTCATGCTGGTGGGAGACACAATGATCTTGATGACGTTGGAAAAGACACGTATCACCATACTTTCTTTGAGATGCTTGGAAATTGGTCATTTGGGGATTACTTTAAAAAGGAAGCCATCACATGGGCCTGGGAACTTCTTACTCAGGTTAGTCGACTTTTACACTCAGAAATAATTGTTTTTCTGAAATTGTGTAATGTTGAGAGTTATTATTTTAGCTTTATAGTTTACGAGTCATAATTTACAATTCTACTTCTTGTATCGCCTTCTCACAAACAGTGTGGTTTGATGCAGTCCATTAGTCCTTTTGTTTTGCTACTTTTCAGCTTGCGAACAACCCTTCTACTTATTACACGTGCTAGCTACTGTAATGTAGAAATCATTTTATCTGTCTTGTACAATACAGTCCATCAGTCTTTTTGTTTGTAGCAAATGTTTCTGGGGTAGGGAATGCGTGTAATGAAGCTTAAGGGCATAGATAAGAGAGAAAGGATCACCAGCTTTGCAATTGAACTTGTGTAATGTCAAATTATAAAAAGCTCCTAGATCATCCTCAATACAATGATTGTGGAAATTGCATTGCTCTGTAATTGTGGTATGGCTGAATTTATATCAGTTGATTGTGTTTTCTCATAATCGTTGCGCTTGTGAACCGATAGGTTTATAAGCTTCCCACAGATCGAATTTATGCTACCTACTTCGGTGGAGATGAGAAAGCTGGTCTTGCACCTGATAATGAGGCTAGGGACATATGGCTGAAGTTTTTGCCTGCTGAACGTGTCTTACCTTTTGGCTGCAAAGTAAGATTACCTAACAATTTCTCTTTCTTTTTTGGTCTTGCAAGCTACAACTACAAATGTCTTGTTATCTATCTGAAATCTGAAGCTGGTATAAAAAATATGTTAAACTTCTCGTTTCTTTATGCTGCAGAAGCTTCAATTATCAAAGAAAACAAAAATCAGTGA

mRNA sequence

ATGAATCAGTTCAAGCCCATTTTTTTGGGTACTGTTGATCCTAACACGTCTTTGAGCAAGCTCACCCGAGCTTGTAATACTCAGAAATGTATTCATGCTGGTGGGAGACACAATGATCTTGATGACGTTGGAAAAGACACGTATCACCATACTTTCTTTGAGATGCTTGGAAATTGGTCATTTGGGGATTACTTTAAAAAGGAAGCCATCACATGGGCCTGGGAACTTCTTACTCAGGTTTATAAGCTTCCCACAGATCGAATTTATGCTACCTACTTCGGTGGAGATGAGAAAGCTGGTCTTGCACCTGATAATGAGGCTAGGGACATATGGCTGAAGTTTTTGCCTGCTGAACGTGTCTTACCTTTTGGCTGCAAAGTAAGATTACCTAACAATTTCTCTTTCTTTTTTGGTCTTGCAAGCTACAACTACAAATGTCTTGTTATCTATCTGAAATCTGAAGCTGAAGCTTCAATTATCAAAGAAAACAAAAATCAGTGA

Coding sequence (CDS)

ATGAATCAGTTCAAGCCCATTTTTTTGGGTACTGTTGATCCTAACACGTCTTTGAGCAAGCTCACCCGAGCTTGTAATACTCAGAAATGTATTCATGCTGGTGGGAGACACAATGATCTTGATGACGTTGGAAAAGACACGTATCACCATACTTTCTTTGAGATGCTTGGAAATTGGTCATTTGGGGATTACTTTAAAAAGGAAGCCATCACATGGGCCTGGGAACTTCTTACTCAGGTTTATAAGCTTCCCACAGATCGAATTTATGCTACCTACTTCGGTGGAGATGAGAAAGCTGGTCTTGCACCTGATAATGAGGCTAGGGACATATGGCTGAAGTTTTTGCCTGCTGAACGTGTCTTACCTTTTGGCTGCAAAGTAAGATTACCTAACAATTTCTCTTTCTTTTTTGGTCTTGCAAGCTACAACTACAAATGTCTTGTTATCTATCTGAAATCTGAAGCTGAAGCTTCAATTATCAAAGAAAACAAAAATCAGTGA

Protein sequence

MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERVLPFGCKVRLPNNFSFFFGLASYNYKCLVIYLKSEAEASIIKENKNQ*

Homology

[Close]

BLAST of MELO3C012870 vs. Swiss-Prot
Match: SYA_ARATH (Alanine--tRNA ligase OS=Arabidopsis thaliana GN=ALATS PE=1 SV=3)

HSP 1 Score: 250.0 bits (637), Expect = 1.8e-65
Identity = 113/126 (89.68%), Postives = 116/126 (92.06%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQ+KPIFLGT DPNT LSKL+RACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 100 MNQYKPIFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 159

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAI WAWELLT+VY LPTDRIYATYFGGDEKAGL PDNEARDIWLK LP+ RV
Sbjct: 160 FGDYFKKEAIEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKVLPSGRV 219

Query: 121 LPFGCK 127
           LPFGCK
Sbjct: 220 LPFGCK 225

[Close]

BLAST of MELO3C012870 vs. Swiss-Prot
Match: SYAC_DICDI (Alanine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum GN=alaS PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 8.0e-53
Identity = 93/126 (73.81%), Postives = 106/126 (84.13%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLG V+P +  +KL RA N+QKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 43  MNQFKPIFLGQVNPKSEQAKLKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 102

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FG+YFKKEAITWAWELLT+VYKL  +R+Y TYF GD + GL  D EA+++WL++LP ERV
Sbjct: 103 FGNYFKKEAITWAWELLTEVYKLDKERLYVTYFRGDPEKGLEADLEAKNLWLQYLPEERV 162

Query: 121 LPFGCK 127
           LPFG K
Sbjct: 163 LPFGMK 168

[Close]

BLAST of MELO3C012870 vs. Swiss-Prot
Match: SYAC_CAEEL (Alanine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=aars-2 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.7e-50
Identity = 90/127 (70.87%), Postives = 101/127 (79.53%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKP+FLG  DPN+ L+KL RA NTQKCI AGG+HNDLDDVGKD YHHT+FEMLGNWS
Sbjct: 46  MNQFKPLFLGIADPNSDLAKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWS 105

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKF-LPAER 120
           FGDYFKKE ITWAWELLT VY +P +R+Y + FGGDE  G+  D+EARDIW    +P ER
Sbjct: 106 FGDYFKKEIITWAWELLTTVYGIPAERLYVSVFGGDEANGVPADSEARDIWRSVGVPDER 165

Query: 121 VLPFGCK 127
           +L FG K
Sbjct: 166 ILNFGMK 172

[Close]

BLAST of MELO3C012870 vs. Swiss-Prot
Match: SYA_CANAL (Alanine--tRNA ligase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALA1 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.5e-48
Identity = 86/123 (69.92%), Postives = 101/123 (82.11%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQ+KPIFLGTVDP +  + L RA N+QKCI AGG+HNDL+DVG+D+YHHTFFEMLGNWS
Sbjct: 65  MNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWS 124

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKF-LPAER 120
           FGDYFKKEAI ++WELLT+VY L  DR+Y TYFGGDEK GL PD EA++ WLK  +P + 
Sbjct: 125 FGDYFKKEAIDYSWELLTKVYGLQEDRLYVTYFGGDEKQGLEPDLEAKNFWLKVGVPEDH 184

Query: 121 VLP 123
           +LP
Sbjct: 185 ILP 187

[Close]

BLAST of MELO3C012870 vs. Swiss-Prot
Match: SYAC_DROME (Alanine--tRNA ligase, cytoplasmic OS=Drosophila melanogaster GN=Aats-ala PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.0e-47
Identity = 87/127 (68.50%), Postives = 94/127 (74.02%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGT DPN+ +SK  R  NTQKCI AGG+HNDLDDVGKD YHHTFFEMLGNWS
Sbjct: 45  MNQFKPIFLGTADPNSEMSKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWS 104

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKF-LPAER 120
           FGDYFKKE  +WAWE LTQ   LP DR+Y TYFGGD  +GL PD E + +WL   L  E 
Sbjct: 105 FGDYFKKEICSWAWEFLTQRLALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEH 164

Query: 121 VLPFGCK 127
           +LP   K
Sbjct: 165 ILPGSMK 171

[Close]

BLAST of MELO3C012870 vs. TrEMBL
Match: A0A0A0LEP6_CUCSA (Alanine--tRNA ligase OS=Cucumis sativus GN=Csa_3G656490 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.3e-67
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGTVDPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 126 MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 185

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAITWAWELLTQVYKLP DRIYATYFGGDEKAGLAPD EARD+WL FLPAERV
Sbjct: 186 FGDYFKKEAITWAWELLTQVYKLPKDRIYATYFGGDEKAGLAPDTEARDMWLNFLPAERV 245

Query: 121 LPFGCK 127
           LPFGCK
Sbjct: 246 LPFGCK 251

[Close]

BLAST of MELO3C012870 vs. TrEMBL
Match: A0A067LGK7_JATCU (Alanine--tRNA ligase OS=Jatropha curcas GN=JCGZ_24210 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.7e-65
Identity = 115/126 (91.27%), Postives = 121/126 (96.03%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGT DPNT+LSKL RACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 116 MNQFKPIFLGTADPNTALSKLIRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 175

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAI WAWELLT+VYKLPTDRIYATYFGGD+KAGLAPDNEARDIWL+FLP ER+
Sbjct: 176 FGDYFKKEAIEWAWELLTKVYKLPTDRIYATYFGGDDKAGLAPDNEARDIWLQFLPPERI 235

Query: 121 LPFGCK 127
           LPFGCK
Sbjct: 236 LPFGCK 241

[Close]

BLAST of MELO3C012870 vs. TrEMBL
Match: A0A067EGD8_CITSI (Alanine--tRNA ligase OS=Citrus sinensis GN=CISIN_1g001826mg PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.4e-65
Identity = 114/126 (90.48%), Postives = 119/126 (94.44%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQ+KPIFLGT DPNT LSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 99  MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 158

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFK EAI WAWELLT+VY+LP DR+YATYFGGDEKAGLAPDNEARDIWLKFLPA RV
Sbjct: 159 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 218

Query: 121 LPFGCK 127
           LPFGCK
Sbjct: 219 LPFGCK 224

[Close]

BLAST of MELO3C012870 vs. TrEMBL
Match: A0A067EPY0_CITSI (Alanine--tRNA ligase OS=Citrus sinensis GN=CISIN_1g001826mg PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.4e-65
Identity = 114/126 (90.48%), Postives = 119/126 (94.44%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQ+KPIFLGT DPNT LSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 99  MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 158

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFK EAI WAWELLT+VY+LP DR+YATYFGGDEKAGLAPDNEARDIWLKFLPA RV
Sbjct: 159 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 218

Query: 121 LPFGCK 127
           LPFGCK
Sbjct: 219 LPFGCK 224

[Close]

BLAST of MELO3C012870 vs. TrEMBL
Match: A0A067EGE2_CITSI (Alanine--tRNA ligase OS=Citrus sinensis GN=CISIN_1g001826mg PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.4e-65
Identity = 114/126 (90.48%), Postives = 119/126 (94.44%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQ+KPIFLGT DPNT LSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 99  MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 158

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFK EAI WAWELLT+VY+LP DR+YATYFGGDEKAGLAPDNEARDIWLKFLPA RV
Sbjct: 159 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 218

Query: 121 LPFGCK 127
           LPFGCK
Sbjct: 219 LPFGCK 224

[Close]

BLAST of MELO3C012870 vs. TAIR10
Match: AT1G50200.1 (AT1G50200.1 Alanyl-tRNA synthetase)

HSP 1 Score: 250.0 bits (637), Expect = 1.0e-66
Identity = 113/126 (89.68%), Postives = 116/126 (92.06%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQ+KPIFLGT DPNT LSKL+RACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 100 MNQYKPIFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 159

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAI WAWELLT+VY LPTDRIYATYFGGDEKAGL PDNEARDIWLK LP+ RV
Sbjct: 160 FGDYFKKEAIEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKVLPSGRV 219

Query: 121 LPFGCK 127
           LPFGCK
Sbjct: 220 LPFGCK 225

[Close]

BLAST of MELO3C012870 vs. TAIR10
Match: AT5G22800.1 (AT5G22800.1 Alanyl-tRNA synthetase, class IIc)

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-22
Identity = 53/99 (53.54%), Postives = 65/99 (65.66%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           M QFKPIFLG V       ++  A   Q+CI    R NDL++VGK   HHTFFEMLGN+S
Sbjct: 118 MLQFKPIFLGKVP-----REVPCATTAQRCI----RTNDLENVGKTARHHTFFEMLGNFS 177

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKA 100
           FGDYFKKEAI WAWEL T  + LP +R++ + +  D++A
Sbjct: 178 FGDYFKKEAIKWAWELSTIEFGLPANRVWVSIYEDDDEA 207

[Close]

BLAST of MELO3C012870 vs. NCBI nr
Match: gi|659093682|ref|XP_008447660.1| (PREDICTED: alanine--tRNA ligase-like [Cucumis melo])

HSP 1 Score: 275.0 bits (702), Expect = 8.6e-71
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 4   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 63

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV
Sbjct: 64  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 123

Query: 121 LPFGCK 127
           LPFGCK
Sbjct: 124 LPFGCK 129

[Close]

BLAST of MELO3C012870 vs. NCBI nr
Match: gi|659123840|ref|XP_008461868.1| (PREDICTED: alanine--tRNA ligase-like [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 1.6e-69
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGTVDPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 126 MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 185

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV
Sbjct: 186 FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 245

Query: 121 LPFGCK 127
           LPFGCK
Sbjct: 246 LPFGCK 251

[Close]

BLAST of MELO3C012870 vs. NCBI nr
Match: gi|778682646|ref|XP_004148575.2| (PREDICTED: alanine--tRNA ligase [Cucumis sativus])

HSP 1 Score: 263.1 bits (671), Expect = 3.4e-67
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGTVDPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 126 MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 185

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAITWAWELLTQVYKLP DRIYATYFGGDEKAGLAPD EARD+WL FLPAERV
Sbjct: 186 FGDYFKKEAITWAWELLTQVYKLPKDRIYATYFGGDEKAGLAPDTEARDMWLNFLPAERV 245

Query: 121 LPFGCK 127
           LPFGCK
Sbjct: 246 LPFGCK 251

[Close]

BLAST of MELO3C012870 vs. NCBI nr
Match: gi|802558739|ref|XP_012065800.1| (PREDICTED: alanine--tRNA ligase [Jatropha curcas])

HSP 1 Score: 256.9 bits (655), Expect = 2.4e-65
Identity = 115/126 (91.27%), Postives = 121/126 (96.03%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGT DPNT+LSKL RACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 116 MNQFKPIFLGTADPNTALSKLIRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 175

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFKKEAI WAWELLT+VYKLPTDRIYATYFGGD+KAGLAPDNEARDIWL+FLP ER+
Sbjct: 176 FGDYFKKEAIEWAWELLTKVYKLPTDRIYATYFGGDDKAGLAPDNEARDIWLQFLPPERI 235

Query: 121 LPFGCK 127
           LPFGCK
Sbjct: 236 LPFGCK 241

[Close]

BLAST of MELO3C012870 vs. NCBI nr
Match: gi|1012033696|ref|XP_015952640.1| (PREDICTED: alanine--tRNA ligase [Arachis duranensis])

HSP 1 Score: 256.1 bits (653), Expect = 4.1e-65
Identity = 117/126 (92.86%), Postives = 122/126 (96.83%), Query Frame = 1


Query: 1   MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWS 60
           MNQFKPIFLGTVDPNT+LSKLTRA NTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 104 MNQFKPIFLGTVDPNTALSKLTRAYNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 163

Query: 61  FGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERV 120
           FGDYFK+EAITWAWELLT+VYKLP+DRIYATYFGGDEKAGLAPDNEARDIWLKFLP  RV
Sbjct: 164 FGDYFKEEAITWAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDNEARDIWLKFLPPGRV 223

Query: 121 LPFGCK 127
           LPFGCK
Sbjct: 224 LPFGCK 229

The following BLAST results are available for this feature:

BLAST of MELO3C012870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SYA_ARATH	1.8e-65	89.68	Alanine--tRNA ligase OS=Arabidopsis thaliana GN=ALATS PE=1 SV=3	[more]
SYAC_DICDI	8.0e-53	73.81	Alanine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum GN=alaS PE=2 SV=1	[more]
SYAC_CAEEL	3.7e-50	70.87	Alanine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=aars-2 PE=2 SV=1	[more]
SYA_CANAL	3.5e-48	69.92	Alanine--tRNA ligase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALA1...	[more]
SYAC_DROME	1.0e-47	68.50	Alanine--tRNA ligase, cytoplasmic OS=Drosophila melanogaster GN=Aats-ala PE=2 SV...	[more]

BLAST of MELO3C012870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEP6_CUCSA	2.3e-67	95.24	Alanine--tRNA ligase OS=Cucumis sativus GN=Csa_3G656490 PE=3 SV=1	[more]
A0A067LGK7_JATCU	1.7e-65	91.27	Alanine--tRNA ligase OS=Jatropha curcas GN=JCGZ_24210 PE=3 SV=1	[more]
A0A067EGD8_CITSI	6.4e-65	90.48	Alanine--tRNA ligase OS=Citrus sinensis GN=CISIN_1g001826mg PE=3 SV=1	[more]
A0A067EPY0_CITSI	6.4e-65	90.48	Alanine--tRNA ligase OS=Citrus sinensis GN=CISIN_1g001826mg PE=3 SV=1	[more]
A0A067EGE2_CITSI	6.4e-65	90.48	Alanine--tRNA ligase OS=Citrus sinensis GN=CISIN_1g001826mg PE=3 SV=1	[more]

BLAST of MELO3C012870 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50200.1	1.0e-66	89.68	Alanyl-tRNA synthetase	[more]
AT5G22800.1	1.6e-22	53.54	Alanyl-tRNA synthetase, class IIc	[more]

BLAST of MELO3C012870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659093682\|ref\|XP_008447660.1\|	8.6e-71	100.00	PREDICTED: alanine--tRNA ligase-like [Cucumis melo]	[more]
gi\|659123840\|ref\|XP_008461868.1\|	1.6e-69	98.41	PREDICTED: alanine--tRNA ligase-like [Cucumis melo]	[more]
gi\|778682646\|ref\|XP_004148575.2\|	3.4e-67	95.24	PREDICTED: alanine--tRNA ligase [Cucumis sativus]	[more]
gi\|802558739\|ref\|XP_012065800.1\|	2.4e-65	91.27	PREDICTED: alanine--tRNA ligase [Jatropha curcas]	[more]
gi\|1012033696\|ref\|XP_015952640.1\|	4.1e-65	92.86	PREDICTED: alanine--tRNA ligase [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018164	Ala-tRNA-synth_IIc_N
IPR018165	Ala-tRNA-synth_IIc_core

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0004813	alanine-tRNA ligase activity
GO:0005524	ATP binding
GO:0003676	nucleic acid binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006419	alanyl-tRNA aminoacylation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0070143	mitochondrial alanyl-tRNA aminoacylation
biological_process	GO:0006419	alanyl-tRNA aminoacylation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004813	alanine-tRNA ligase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012870T1	MELO3C012870T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018164	Alanyl-tRNA synthetase, class IIc, N-terminal	PFAM	PF01411	tRNA-synt_2c	coord: 1..134 score: 2.6
IPR018165	Alanyl-tRNA synthetase, class IIc, core domain	PROFILE	PS50860	AA_TRNA_LIGASE_II_ALA	coord: 1..166 score: 2
None	No IPR available	GENE3D	G3DSA:3.30.930.10		coord: 1..125 score: 1.0
None	No IPR available	PANTHER	PTHR11777	ALANYL-TRNA SYNTHETASE	coord: 1..126 score: 1.5E
None	No IPR available	PANTHER	PTHR11777:SF18	ALANINE--TRNA LIGASE, CYTOPLASMIC	coord: 1..126 score: 1.5E
None	No IPR available	unknown	SSF55681	Class II aaRS and biotin synthetases	coord: 1..126 score: 1.59

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C012870	Wax gourd	mewgoB396
MELO3C012870	Wax gourd	mewgoB401
MELO3C012870	Melon (DHL92) v3.5.1	memeB140
MELO3C012870	Cucurbita maxima (Rimu)	cmameB471
MELO3C012870	Cucurbita maxima (Rimu)	cmameB568
MELO3C012870	Cucurbita moschata (Rifu)	cmomeB461
MELO3C012870	Cucurbita moschata (Rifu)	cmomeB557
MELO3C012870	Wild cucumber (PI 183967)	cpimeB203
MELO3C012870	Wild cucumber (PI 183967)	cpimeB210
MELO3C012870	Cucumber (Chinese Long) v2	cumeB213
MELO3C012870	Cucumber (Chinese Long) v2	cumeB219
MELO3C012870	Watermelon (Charleston Gray)	mewcgB346
MELO3C012870	Watermelon (97103) v1	mewmB357
MELO3C012870	Watermelon (97103) v1	mewmB371
MELO3C012870	Cucurbita pepo (Zucchini)	cpemeB231
MELO3C012870	Cucurbita pepo (Zucchini)	cpemeB690
MELO3C012870	Bottle gourd (USVL1VR-Ls)	lsimeB356
MELO3C012870	Bottle gourd (USVL1VR-Ls)	lsimeB358
MELO3C012870	Cucumber (Gy14) v2	cgybmeB176
MELO3C012870	Silver-seed gourd	carmeB0744
MELO3C012870	Silver-seed gourd	carmeB0772
MELO3C012870	Cucumber (Chinese Long) v3	cucmeB209
MELO3C012870	Cucumber (Chinese Long) v3	cucmeB215
MELO3C012870	Watermelon (97103) v2	mewmbB335
MELO3C012870	Watermelon (97103) v2	mewmbB349