MELO3C012815 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C012815
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTransposon Ty1-BL Gag-Pol polyprotein
Locationchr4 : 12461452 .. 12461715 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAGGGGAAGGAAGTGGAAGCAAATATTACTACCATAGAAAAAGAGTTTATGAGAGGATCGTCTTCTAAAACTAAAGTTGGGAATTCACAAATGAAGAAGAAGGGAAAGGGGAAGATTCCCAAGAACAATAAGGGAAAAAAGTTGCAAAAGGTAAATGTTACCACTGCAAGCAGAATGGGCGTTGGTTGGGAAATTCCCTGGAGTACCTTGCTGAGAAGAAAACTAAGAAAGAAGCACAAGGTACTTAATGGAATATGA

mRNA sequence

ATGGGTAAGGGGAAGGAAGTGGAAGCAAATATTACTACCATAGAAAAAGAGTTTATGAGAGGATCGTCTTCTAAAACTAAAGTTGGGAATTCACAAATGAAGAAGAAGGGAAAGGGGAAGATTCCCAAGAACAATAAGGGAAAAAAGTTGCAAAAGGTAAATGTTACCACTGCAAGCAGAATGGGCGTTGGTTGGGAAATTCCCTGGAGTACCTTGCTGAGAAGAAAACTAAGAAAGAAGCACAAGGTACTTAATGGAATATGA

Coding sequence (CDS)

ATGGGTAAGGGGAAGGAAGTGGAAGCAAATATTACTACCATAGAAAAAGAGTTTATGAGAGGATCGTCTTCTAAAACTAAAGTTGGGAATTCACAAATGAAGAAGAAGGGAAAGGGGAAGATTCCCAAGAACAATAAGGGAAAAAAGTTGCAAAAGGTAAATGTTACCACTGCAAGCAGAATGGGCGTTGGTTGGGAAATTCCCTGGAGTACCTTGCTGAGAAGAAAACTAAGAAAGAAGCACAAGGTACTTAATGGAATATGA

Protein sequence

MGKGKEVEANITTIEKEFMRGSSSKTKVGNSQMKKKGKGKIPKNNKGKKLQKVNVTTASRMGVGWEIPWSTLLRRKLRKKHKVLNGI*
Homology
[Close]
BLAST of MELO3C012815 vs. TrEMBL
Match: E2GK51_BRYDI (Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-07
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 1 

Query: 1   MGKGKEVEANITTIEKEFMRGSSSKTKVGNS--QMKKKGKGKIPKNNKGKK 50
           + KGKEVEAN+   +++F+RGSSSK KVG S  QMKKKGKGK P  +K KK
Sbjct: 197 LSKGKEVEANVAVTKRKFIRGSSSKNKVGPSKAQMKKKGKGKAPNTSKVKK 247

[Close]
BLAST of MELO3C012815 vs. NCBI nr
Match: gi|299474487|gb|ADJ18449.1| (gag/pol protein [Bryonia dioica])

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-07
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 1 

Query: 1   MGKGKEVEANITTIEKEFMRGSSSKTKVGNS--QMKKKGKGKIPKNNKGKK 50
           + KGKEVEAN+   +++F+RGSSSK KVG S  QMKKKGKGK P  +K KK
Sbjct: 197 LSKGKEVEANVAVTKRKFIRGSSSKNKVGPSKAQMKKKGKGKAPNTSKVKK 247

The following BLAST results are available for this feature:
BLAST of MELO3C012815 vs. TrEMBL
Match NameE-valueIdentityDescription
E2GK51_BRYDI1.4e-0762.75Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1[more]
BLAST of MELO3C012815 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|299474487|gb|ADJ18449.1|2.1e-0762.75gag/pol protein [Bryonia dioica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012815T1MELO3C012815T1mRNA