MELO3C012806 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C012806
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative movement protein
Locationchr4 : 12182426 .. 12182929 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTCTAAACTACTCTCTAAGCTCTCTCCTCACTCTCCCACAATCATCGACGCTACCGCTTCCTCTTCTTACTCTTCTTCATCGCCTTCGAATCTGAGATCCAAAAATGATCTTTCAACAGCTCTTGCCGAGCATAATTCAGCCGAAGCCCATCTGGCTCAGGTTGAAAACCGACTCAAAAATTGGTCTATTCCAAAACTAGAGGCCAATCAAGTGTACAAAATCAACACCTTCAATTTTTCTCAGCAAGACGTTATAGTCATCACTGAAGAAAACGTAGCAATGAAAGATGAGTTCACTGCTATCAAACTCTTACCTGAAGAGACTCTCTTCAAAGTCAGAGACAGGTTCAAGTACCTTCACATAGGATGCGTTCAAGTTGCCTTGAAACCGCTCTTTAGAGAAGGGTTAAATGTTCCTGTCTACCTTGCTCTAAGAGACAAGAGGCATCTCAGATTCACTCCCTCTCTCTTAGGGATTGTCCAATCAAACTTGGAATAA

mRNA sequence

ATGCTTTCTAAACTACTCTCTAAGCTCTCTCCTCACTCTCCCACAATCATCGACGCTACCGCTTCCTCTTCTTACTCTTCTTCATCGCCTTCGAATCTGAGATCCAAAAATGATCTTTCAACAGCTCTTGCCGAGCATAATTCAGCCGAAGCCCATCTGGCTCAGGTTGAAAACCGACTCAAAAATTGGTCTATTCCAAAACTAGAGGCCAATCAAGTGTACAAAATCAACACCTTCAATTTTTCTCAGCAAGACGTTATAGTCATCACTGAAGAAAACGTAGCAATGAAAGATGAGTTCACTGCTATCAAACTCTTACCTGAAGAGACTCTCTTCAAAGTCAGAGACAGGTTCAAGTACCTTCACATAGGATGCGTTCAAGTTGCCTTGAAACCGCTCTTTAGAGAAGGGTTAAATGTTCCTGTCTACCTTGCTCTAAGAGACAAGAGGCATCTCAGATTCACTCCCTCTCTCTTAGGGATTGTCCAATCAAACTTGGAATAA

Coding sequence (CDS)

ATGCTTTCTAAACTACTCTCTAAGCTCTCTCCTCACTCTCCCACAATCATCGACGCTACCGCTTCCTCTTCTTACTCTTCTTCATCGCCTTCGAATCTGAGATCCAAAAATGATCTTTCAACAGCTCTTGCCGAGCATAATTCAGCCGAAGCCCATCTGGCTCAGGTTGAAAACCGACTCAAAAATTGGTCTATTCCAAAACTAGAGGCCAATCAAGTGTACAAAATCAACACCTTCAATTTTTCTCAGCAAGACGTTATAGTCATCACTGAAGAAAACGTAGCAATGAAAGATGAGTTCACTGCTATCAAACTCTTACCTGAAGAGACTCTCTTCAAAGTCAGAGACAGGTTCAAGTACCTTCACATAGGATGCGTTCAAGTTGCCTTGAAACCGCTCTTTAGAGAAGGGTTAAATGTTCCTGTCTACCTTGCTCTAAGAGACAAGAGGCATCTCAGATTCACTCCCTCTCTCTTAGGGATTGTCCAATCAAACTTGGAATAA

Protein sequence

MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEFTAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE*
Homology
[Close]
BLAST of MELO3C012806 vs. TrEMBL
Match: A0A0A0M024_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G434190 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.0e-62
Identity = 127/167 (76.05%), Postives = 142/167 (85.03%), Query Frame = 1 

Query: 1   MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60
           M+ KLLSKLS H+PTIID T SS        N RSK DLS A+A+   AE+ LAQ+ENRL
Sbjct: 1   MILKLLSKLSLHTPTIIDTTVSS--------NSRSKYDLSKAIAKQTKAESQLAQIENRL 60

Query: 61  KNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEFTAIKLLPEETLFKVRDRFKY 120
           KNWSIPKLEA +VY+INTFNFSQQD+IVITEENVAMKDEFT +KLLPEETLF+ R++FKY
Sbjct: 61  KNWSIPKLEAKEVYRINTFNFSQQDMIVITEENVAMKDEFTTVKLLPEETLFRSREKFKY 120

Query: 121 LHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE 168
           LHI CVQVALKPLFREGL+V VYLALRDKRH RFTPSLLGI+QSNLE
Sbjct: 121 LHIECVQVALKPLFREGLDVSVYLALRDKRHRRFTPSLLGIIQSNLE 159

[Close]
BLAST of MELO3C012806 vs. TrEMBL
Match: A0A151RPG4_CAJCA (Polyprotein OS=Cajanus cajan GN=KK1_034056 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.5e-18
Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 1 

Query: 22  SSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNF 81
           SS+  SSS S  + K   S    E    E H       L +W +PK+ AN++YK++   F
Sbjct: 6   SSNPGSSSLSEKQFKPQSSNVFNEEFCFEDH----NQELDDWQLPKVSANEIYKLDGRWF 65

Query: 82  SQQDVIVITEEN-VAMKDEFTAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNV 141
            Q D I+ T E+ + + +E     LL E++L +   ++ YLHIGC+QVA+KPL  +GL+ 
Sbjct: 66  KQTDYIIKTAESQIPLSNEEEEFHLLDEQSLKEEAKKYNYLHIGCIQVAIKPLGIKGLDN 125

Query: 142 PVYLALRDKRHLRFTPSLLGIVQSNL 167
            +   LRD RHLRF  SL+G V+++L
Sbjct: 126 SILCCLRDLRHLRFNQSLIGTVETSL 147

[Close]
BLAST of MELO3C012806 vs. TrEMBL
Match: A5C143_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023373 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-16
Identity = 49/140 (35.00%), Postives = 81/140 (57.86%), Query Frame = 1 

Query: 28  SSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVI 87
           S+  +LRS +   T +   NS E +  +++N L +W +PK+   ++YK  TF F     I
Sbjct: 546 SNGLSLRSSDSQDTVV---NSEEINYPKIQNDLDDWKLPKVSNQEIYKKGTFKFFTDYTI 605

Query: 88  VITEENVAMKDEFTAIKLLPEETLFK-VRDRFKYLHIGCVQVALKPLFREGLNVPVYLAL 147
             +E  V+++ +   I+LL   ++ K  +D + ++H G +QVA KPL R GLN  + + L
Sbjct: 606 KTSEMTVSLEQDDQVIRLLDNRSVEKHKKDGYNFIHFGMIQVAAKPLTRLGLNTAIVMCL 665

Query: 148 RDKRHLRFTPSLLGIVQSNL 167
           RD RHL +  S++G VQ+ L
Sbjct: 666 RDNRHLEYRDSIIGAVQAGL 682

[Close]
BLAST of MELO3C012806 vs. TrEMBL
Match: I3S3X5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-16
Identity = 47/122 (38.52%), Postives = 79/122 (64.75%), Query Frame = 1 

Query: 47  NSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEFTAIKLL 106
           N++E + + +E +L+NWSIPK+  NQVYK + F F+    I   E++ A++  + +I +L
Sbjct: 11  NNSEENDSNLEQKLQNWSIPKIRTNQVYKTSIFEFNPDYEIKTVEKSFAVQGPYQSISIL 70

Query: 107 PEETLFKVRDRFKYLHIGCVQVALKPLFR-EGLNVPVYLALRDKRHLRFTPSLLGIVQSN 166
                 +   ++ YLHIG VQVA+KPL R    ++P+ + LRDKR LRF  S++ +++SN
Sbjct: 71  DSRIANQHVRKYGYLHIGLVQVAVKPLTRLRYCDLPILICLRDKRMLRFHESVVAVLESN 130

Query: 167 LE 168
           ++
Sbjct: 131 IQ 132

[Close]
BLAST of MELO3C012806 vs. TrEMBL
Match: A5C0V2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001866 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-16
Identity = 45/121 (37.19%), Postives = 73/121 (60.33%), Query Frame = 1 

Query: 47  NSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEFTAIKLL 106
           NS E +  +++N L +W +PK+   ++YK  TF F     I  +E +V+++ +   I+LL
Sbjct: 14  NSEEINYPKIQNDLDDWKLPKVSNQEIYKKGTFKFFTDYTIKTSEMSVSLEQDDQVIRLL 73

Query: 107 PEETLFK-VRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSN 166
              ++ K  RD + ++H G +QVA KPL R GLN  + + LRD RHL +  S++G VQ+ 
Sbjct: 74  DNRSIDKHKRDGYNFIHFGMIQVAAKPLTRLGLNTSIVMCLRDNRHLEYRDSIIGAVQAG 133

[Close]
BLAST of MELO3C012806 vs. NCBI nr
Match: gi|700210425|gb|KGN65521.1| (hypothetical protein Csa_1G434190 [Cucumis sativus])

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-62
Identity = 127/167 (76.05%), Postives = 142/167 (85.03%), Query Frame = 1 

Query: 1   MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRL 60
           M+ KLLSKLS H+PTIID T SS        N RSK DLS A+A+   AE+ LAQ+ENRL
Sbjct: 1   MILKLLSKLSLHTPTIIDTTVSS--------NSRSKYDLSKAIAKQTKAESQLAQIENRL 60

Query: 61  KNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEFTAIKLLPEETLFKVRDRFKY 120
           KNWSIPKLEA +VY+INTFNFSQQD+IVITEENVAMKDEFT +KLLPEETLF+ R++FKY
Sbjct: 61  KNWSIPKLEAKEVYRINTFNFSQQDMIVITEENVAMKDEFTTVKLLPEETLFRSREKFKY 120

Query: 121 LHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE 168
           LHI CVQVALKPLFREGL+V VYLALRDKRH RFTPSLLGI+QSNLE
Sbjct: 121 LHIECVQVALKPLFREGLDVSVYLALRDKRHRRFTPSLLGIIQSNLE 159

[Close]
BLAST of MELO3C012806 vs. NCBI nr
Match: gi|723754433|ref|XP_010314985.1| (PREDICTED: uncharacterized protein LOC104645308 [Solanum lycopersicum])

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-20
Identity = 52/120 (43.33%), Postives = 80/120 (66.67%), Query Frame = 1 

Query: 47  NSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEFTAIKLL 106
           +S    +A++EN L+NWSIP+    ++Y++  F+F  +  I   E  +A+ +    ++LL
Sbjct: 14  SSQSTKIAKIENDLQNWSIPEEPYKKIYQLGNFSFLTRCNIKTCESTIAINNSSEIVRLL 73

Query: 107 PEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNL 166
            ++ L + +  F YLHIG VQVA+KPLFR+GL++PV + LRD R L F  SLLG++QSNL
Sbjct: 74  KDKDLDRYKSSFNYLHIGLVQVAVKPLFRKGLDIPVCVLLRDDRFLNFDDSLLGLLQSNL 133

[Close]
BLAST of MELO3C012806 vs. NCBI nr
Match: gi|723667489|ref|XP_010315574.1| (PREDICTED: uncharacterized protein LOC104645514 [Solanum lycopersicum])

HSP 1 Score: 107.5 bits (267), Expect = 2.4e-20
Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = 1 

Query: 38  DLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMK 97
           D S   A+       +A++EN L+NWSIP+    ++Y++  F+F  +  I   E  +A+ 
Sbjct: 16  DASDEKAKEFGVVFFIAKIENDLQNWSIPEEPFKKIYQLGNFSFLTRCNIKTCESTIAIN 75

Query: 98  DEFTAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPS 157
           +    ++LL ++ L + +  F YLHIG VQVA+KPLFR GL++PV + LRD R L F  S
Sbjct: 76  NSSEIVRLLKDKDLDRYKSSFNYLHIGLVQVAVKPLFRRGLDIPVCVLLRDDRFLNFDDS 135

Query: 158 LLGIVQSNL 167
           LLG++QSNL
Sbjct: 136 LLGLLQSNL 144

[Close]
BLAST of MELO3C012806 vs. NCBI nr
Match: gi|1012333014|gb|KYP44422.1| (polyprotein [Cajanus cajan])

HSP 1 Score: 99.4 bits (246), Expect = 6.5e-18
Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 1 

Query: 22  SSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNF 81
           SS+  SSS S  + K   S    E    E H       L +W +PK+ AN++YK++   F
Sbjct: 6   SSNPGSSSLSEKQFKPQSSNVFNEEFCFEDH----NQELDDWQLPKVSANEIYKLDGRWF 65

Query: 82  SQQDVIVITEEN-VAMKDEFTAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNV 141
            Q D I+ T E+ + + +E     LL E++L +   ++ YLHIGC+QVA+KPL  +GL+ 
Sbjct: 66  KQTDYIIKTAESQIPLSNEEEEFHLLDEQSLKEEAKKYNYLHIGCIQVAIKPLGIKGLDN 125

Query: 142 PVYLALRDKRHLRFTPSLLGIVQSNL 167
            +   LRD RHLRF  SL+G V+++L
Sbjct: 126 SILCCLRDLRHLRFNQSLIGTVETSL 147

[Close]
BLAST of MELO3C012806 vs. NCBI nr
Match: gi|147833383|emb|CAN66235.1| (hypothetical protein VITISV_023373 [Vitis vinifera])

HSP 1 Score: 94.0 bits (232), Expect = 2.7e-16
Identity = 49/140 (35.00%), Postives = 81/140 (57.86%), Query Frame = 1 

Query: 28  SSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVI 87
           S+  +LRS +   T +   NS E +  +++N L +W +PK+   ++YK  TF F     I
Sbjct: 546 SNGLSLRSSDSQDTVV---NSEEINYPKIQNDLDDWKLPKVSNQEIYKKGTFKFFTDYTI 605

Query: 88  VITEENVAMKDEFTAIKLLPEETLFK-VRDRFKYLHIGCVQVALKPLFREGLNVPVYLAL 147
             +E  V+++ +   I+LL   ++ K  +D + ++H G +QVA KPL R GLN  + + L
Sbjct: 606 KTSEMTVSLEQDDQVIRLLDNRSVEKHKKDGYNFIHFGMIQVAAKPLTRLGLNTAIVMCL 665

Query: 148 RDKRHLRFTPSLLGIVQSNL 167
           RD RHL +  S++G VQ+ L
Sbjct: 666 RDNRHLEYRDSIIGAVQAGL 682

The following BLAST results are available for this feature:
BLAST of MELO3C012806 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M024_CUCSA1.0e-6276.05Uncharacterized protein OS=Cucumis sativus GN=Csa_1G434190 PE=4 SV=1[more]
A0A151RPG4_CAJCA4.5e-1839.04Polyprotein OS=Cajanus cajan GN=KK1_034056 PE=4 SV=1[more]
A5C143_VITVI1.9e-1635.00Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023373 PE=4 SV=1[more]
I3S3X5_LOTJA1.9e-1638.52Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
A5C0V2_VITVI2.5e-1637.19Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001866 PE=4 SV=1[more]
BLAST of MELO3C012806 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210425|gb|KGN65521.1|1.5e-6276.05hypothetical protein Csa_1G434190 [Cucumis sativus][more]
gi|723754433|ref|XP_010314985.1|1.4e-2043.33PREDICTED: uncharacterized protein LOC104645308 [Solanum lycopersicum][more]
gi|723667489|ref|XP_010315574.1|2.4e-2041.86PREDICTED: uncharacterized protein LOC104645514 [Solanum lycopersicum][more]
gi|1012333014|gb|KYP44422.1|6.5e-1839.04polyprotein [Cajanus cajan][more]
gi|147833383|emb|CAN66235.1|2.7e-1635.00hypothetical protein VITISV_023373 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012806T1MELO3C012806T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 39..59
scor
NoneNo IPR availablePANTHERPTHR33054FAMILY NOT NAMEDcoord: 1..164
score: 3.5
NoneNo IPR availablePANTHERPTHR33054:SF7SUBFAMILY NOT NAMEDcoord: 1..164
score: 3.5