MELO3C012772 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012772
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Retrotransposon protein, Ty3-gypsy subclass, putative
Location	chr1 : 23425483 .. 23427025 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGAAGCCGCTATGTCAGTAGGCAAGTTGGGAAGTTTAGTTGCACATTTCCAAGTGCGACCTATTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAGGCTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATATGATAGGTTATGTGTACCCAGTGACCAAACGATAAAAGATCAAATTTCAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTTGTGGCCAGGTATGAAGCGTGAGATTGTAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTTAATCCTCTTGCAGTACTGGAATGGAAATGGGAGCATGTTACCATGGACTTTCTTTTTGGACTACCCCGCACAATGAATGGGAATGATGGCATTTGGGTGATAGTTGACAGACTTACGAAGACAGCAAGATTTCTACCAGTCAAGCTCACTTTCACTTTGGATAAGCTGGCCAAGTTGTATGTTGATAAAATTGTGAGTGCGTATGGAGCCCCAGTATCTATTGTGTCTGATCGAGACTTCAGGTTTACCTCAAAGTTTTGGCCAAGTTTACAACAAGCCTTAGGTACCAAGTTACATTTTAGTACCGCATTTCATCCTCAGACAGATGGCCAGTCAGAACGAACCATTCAAACTTTGGAAGATATGCTTAGAGCTTGTGCTTTGCAGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGATGGAATTTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGGTACCATATGAGGCTTTGTATGGTAGACGTTGTAGAACTCCCGTGTGGTGGGATGAAGTTGGAGAAAGGAAGTTAGTGGGGCCAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTCAAAAACGTTATGCAGATAAGCGCCGACAAGATTTAGAATTTGAAGTTGGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGTGTGCTTTGATTTGGCAGAAAAGGAAAGTTGAGTCCAGGATTTATTGGGCCTTATAAGATACTAGAACGTATTGGGCCTGTAGCATACCGTTTGACGTTACCTATGGAACTTTCCAGGATTCATGAATGTGTTTCATGTGTCAATGCCGCGTAAGTACGTCCCAGATCCATCTCATATTCTTGAAGCACAACCAGTTCATTTGAAAGAAAACTTGTCCTACGAAAAGGAGCAAATACAAATTCTTGACAAAAAAGAACAAGTGCTAAGGAACAAAGTGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACGGAGCAAGCAATGAAGGCGCAATCCCACATCTTTTCACATCATCACCTTGATCGAATTTCGAGGACGAAATTCTTAAAAAGGAGGTAG

mRNA sequence

ATGGGTGAAGCCGCTATGTCAGTAGGCAAGTTGGGAAGTTTAGTTGCACATTTCCAAGTGCGACCTATTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAGGCTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATATGATAGGTTATGTGTACCCAGTGACCAAACGATAAAAGATCAAATTTCAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTTGTGGCCAGGTATGAAGCGTGAGATTGTAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTTAATCCTCTTGCAGTACTGGAATGGAAATGGGAGCATGTTACCATGGACTTTCTTTTTGGACTACCCCGCACAATGAATGGGAATGATGGCATTTGGGTGATAGTTGACAGACTTACGAAGACAGCAAGATTTCTACCAGTCAAGCTCACTTTCACTTTGGATAAGCTGGCCAAGTTGTATGTTGATAAAATTGTGAGTGCGTATGGAGCCCCAGTATCTATTGTGTCTGATCGAGACTTCAGGTTTACCTCAAAGTTTTGGCCAAGTTTACAACAAGCCTTAGGTACCAAGTTACATTTTAGTACCGCATTTCATCCTCAGACAGATGGCCAGTCAGAACGAACCATTCAAACTTTGGAAGATATGCTTAGAGCTTGTGCTTTGCAGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGATGGAATTTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGGTACCATATGAGGCTTTGTATGGTAGACGTTGTAGAACTCCCGTGTGGTGGGATGAAGTTGGAGAAAGGAAGTTAGTGGGGCCAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTCAAAAACGTTATGCAGATAAGCGCCGACAAGATTTAGAATTTGAAGTTGGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGATTCATGAATGTGTTTCATGTGTCAATGCCGCGTAAGTACGTCCCAGATCCATCTCATATTCTTGAAGCACAACCAGTTCATTTGAAAGAAAACTTGTCCTACGAAAAGGAGCAAATACAAATTCTTGACAAAAAAGAACAAGTGCTAAGGAACAAAGTGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACGGAGCAAGCAATGAAGGCGCAATCCCACATCTTTTCACATCATCACCTTGATCGAATTTCGAGGACGAAATTCTTAAAAAGGAGGTAG

Coding sequence (CDS)

ATGGGTGAAGCCGCTATGTCAGTAGGCAAGTTGGGAAGTTTAGTTGCACATTTCCAAGTGCGACCTATTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAGGCTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATATGATAGGTTATGTGTACCCAGTGACCAAACGATAAAAGATCAAATTTCAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTTGTGGCCAGGTATGAAGCGTGAGATTGTAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTTAATCCTCTTGCAGTACTGGAATGGAAATGGGAGCATGTTACCATGGACTTTCTTTTTGGACTACCCCGCACAATGAATGGGAATGATGGCATTTGGGTGATAGTTGACAGACTTACGAAGACAGCAAGATTTCTACCAGTCAAGCTCACTTTCACTTTGGATAAGCTGGCCAAGTTGTATGTTGATAAAATTGTGAGTGCGTATGGAGCCCCAGTATCTATTGTGTCTGATCGAGACTTCAGGTTTACCTCAAAGTTTTGGCCAAGTTTACAACAAGCCTTAGGTACCAAGTTACATTTTAGTACCGCATTTCATCCTCAGACAGATGGCCAGTCAGAACGAACCATTCAAACTTTGGAAGATATGCTTAGAGCTTGTGCTTTGCAGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGATGGAATTTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGGTACCATATGAGGCTTTGTATGGTAGACGTTGTAGAACTCCCGTGTGGTGGGATGAAGTTGGAGAAAGGAAGTTAGTGGGGCCAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTCAAAAACGTTATGCAGATAAGCGCCGACAAGATTTAGAATTTGAAGTTGGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGATTCATGAATGTGTTTCATGTGTCAATGCCGCGTAAGTACGTCCCAGATCCATCTCATATTCTTGAAGCACAACCAGTTCATTTGAAAGAAAACTTGTCCTACGAAAAGGAGCAAATACAAATTCTTGACAAAAAAGAACAAGTGCTAAGGAACAAAGTGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACGGAGCAAGCAATGAAGGCGCAATCCCACATCTTTTCACATCATCACCTTGATCGAATTTCGAGGACGAAATTCTTAAAAAGGAGGTAG

Protein sequence

MGEAAMSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYLWPGMKREIVDYVAKCLICQQVKPERQRPAGLLNPLAVLEWKWEHVTMDFLFGLPRTMNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPVSIVSDRDFRFTSKFWPSLQQALGTKLHFSTAFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSIGMVPYEALYGRRCRTPVWWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKRYADKRRQDLEFEVGDKVFLKLSPWKGFMNVFHVSMPRKYVPDPSHILEAQPVHLKENLSYEKEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAMKAQSHIFSHHHLDRISRTKFLKRR*

Homology

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BLAST of MELO3C012772 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 187.6 bits (475), Expect = 3.2e-46
Identity = 119/326 (36.50%), Postives = 168/326 (51.53%), Query Frame = 1


Query: 44   EVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHS-SAYAMHPGSTKVYRTLK 103
            E+ +  R NYSL  D  +   DRL VP  Q  ++ +    H  + +  H G T     + 
Sbjct: 1067 ELSETFRKNYSLE-DEMIYYQDRLVVPIKQ--QNAVMRLYHDHTLFGGHFGVTVTLAKIS 1126

Query: 104  KHYLWPGMKREIVDYVAKCLICQQVKPERQRPAGLLNPLAVLEWKWEHVTMDFLFGLPRT 163
              Y WP ++  I+ Y+  C+ CQ +K  R R  GLL PL + E +W  ++MDF+ GLP T
Sbjct: 1127 PIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPT 1186

Query: 164  MNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPVSIVSDRDFRFTS 223
             N  + I V+VDR +K A F+  + T    +L  L    I S +G P +I SDRD R T+
Sbjct: 1187 SNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTA 1246

Query: 224  KFWPSLQQALGTKLHFSTAFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFA 283
              +  L + LG K   S+A HPQTDGQSERTIQTL  +LRA A     NW  +L  +EF 
Sbjct: 1247 DKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQNWHVYLPQIEFV 1306

Query: 284  YNNSFHSSIGMVPYEALYGRRCRTPVWW--DEVGERKLVGPELVQITSENVKIIRERLKT 343
            YN++   ++G  P+E   G    TP     DEV  R     EL +         +E+L+ 
Sbjct: 1307 YNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVELAKHLKALTIQTKEQLEH 1366

Query: 344  AQDRQKRYADKRRQDLEFEVGDKVFL 367
            AQ   +   ++RR+ L   +GD V +
Sbjct: 1367 AQIEMETNNNQRRKPLLLNIGDHVLV 1389

[Close]

BLAST of MELO3C012772 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 9.3e-46
Identity = 118/326 (36.20%), Postives = 167/326 (51.23%), Query Frame = 1


Query: 44   EVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHS-SAYAMHPGSTKVYRTLK 103
            E+ +  R NYSL  D  +   DRL VP  Q  ++ +    H  + +  H G T     + 
Sbjct: 1093 ELSETFRKNYSLE-DEMIYYQDRLVVPIKQ--QNAVMRLYHDHTLFGGHFGVTVTLAKIS 1152

Query: 104  KHYLWPGMKREIVDYVAKCLICQQVKPERQRPAGLLNPLAVLEWKWEHVTMDFLFGLPRT 163
              Y WP ++  I+ Y+  C+ CQ +K  R R  GLL PL + E +W  ++MDF+ GLP T
Sbjct: 1153 PIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPT 1212

Query: 164  MNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPVSIVSDRDFRFTS 223
             N  + I V+VDR +K A F+  + T    +L  L    I S +G P +I SDRD R T+
Sbjct: 1213 SNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTA 1272

Query: 224  KFWPSLQQALGTKLHFSTAFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFA 283
              +  L + LG K   S+A HPQTDGQSERTIQTL  +LRA       NW  +L  +EF 
Sbjct: 1273 DKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQNWHVYLPQIEFV 1332

Query: 284  YNNSFHSSIGMVPYEALYGRRCRTPVWW--DEVGERKLVGPELVQITSENVKIIRERLKT 343
            YN++   ++G  P+E   G    TP     DEV  R     EL +         +E+L+ 
Sbjct: 1333 YNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVELAKHLKALTIQTKEQLEH 1392

Query: 344  AQDRQKRYADKRRQDLEFEVGDKVFL 367
            AQ   +   ++RR+ L   +GD V +
Sbjct: 1393 AQIEMETNNNQRRKPLLLNIGDHVLV 1415

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BLAST of MELO3C012772 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.0e-45
Identity = 99/348 (28.45%), Postives = 177/348 (50.86%), Query Frame = 1


Query: 26   DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHS 85
            ++++    +D +L  L     +    N  L+    +   D++ +P+D  +   I ++ H 
Sbjct: 862  NQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHE 921

Query: 86   SAYAMHPGSTKVYRTLKKHYLWPGMKREIVDYVAKCLICQQVKPERQRPAGLLNPLAVLE 145
                +HPG   +   + + + W G++++I +YV  C  CQ  K    +P G L P+   E
Sbjct: 922  EGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSE 981

Query: 146  WKWEHVTMDFLFGLPRTMNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSA 205
              WE ++MDF+  LP + +G + ++V+VDR +K A  +P   + T ++ A+++  ++++ 
Sbjct: 982  RPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAY 1041

Query: 206  YGAPVSIVSDRDFRFTSKFWPSLQQALGTKLHFSTAFHPQTDGQSERTIQTLEDMLRACA 265
            +G P  I++D D  FTS+ W          + FS  + PQTDGQ+ERT QT+E +LR   
Sbjct: 1042 FGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVC 1101

Query: 266  LQFKGNWDAHLSLMEFAYNNSFHSSIGMVPYEALYG-----RRCRTPVWWDEVGERKLVG 325
                  W  H+SL++ +YNN+ HS+  M P+E ++           P + D+  E     
Sbjct: 1102 STHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENS--- 1161

Query: 326  PELVQITSENVKIIRERLKTAQDRQKRYADKRRQDL-EFEVGDKVFLK 368
                Q T +  + ++E L T   + K+Y D + Q++ EF+ GD V +K
Sbjct: 1162 ----QETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK 1201

[Close]

BLAST of MELO3C012772 vs. Swiss-Prot
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.0e-45
Identity = 99/348 (28.45%), Postives = 177/348 (50.86%), Query Frame = 1


Query: 26   DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHS 85
            ++++    +D +L  L     +    N  L+    +   D++ +P+D  +   I ++ H 
Sbjct: 862  NQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHE 921

Query: 86   SAYAMHPGSTKVYRTLKKHYLWPGMKREIVDYVAKCLICQQVKPERQRPAGLLNPLAVLE 145
                +HPG   +   + + + W G++++I +YV  C  CQ  K    +P G L P+   E
Sbjct: 922  EGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSE 981

Query: 146  WKWEHVTMDFLFGLPRTMNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSA 205
              WE ++MDF+  LP + +G + ++V+VDR +K A  +P   + T ++ A+++  ++++ 
Sbjct: 982  RPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAY 1041

Query: 206  YGAPVSIVSDRDFRFTSKFWPSLQQALGTKLHFSTAFHPQTDGQSERTIQTLEDMLRACA 265
            +G P  I++D D  FTS+ W          + FS  + PQTDGQ+ERT QT+E +LR   
Sbjct: 1042 FGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVC 1101

Query: 266  LQFKGNWDAHLSLMEFAYNNSFHSSIGMVPYEALYG-----RRCRTPVWWDEVGERKLVG 325
                  W  H+SL++ +YNN+ HS+  M P+E ++           P + D+  E     
Sbjct: 1102 STHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENS--- 1161

Query: 326  PELVQITSENVKIIRERLKTAQDRQKRYADKRRQDL-EFEVGDKVFLK 368
                Q T +  + ++E L T   + K+Y D + Q++ EF+ GD V +K
Sbjct: 1162 ----QETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK 1201

[Close]

BLAST of MELO3C012772 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.0e-45
Identity = 99/348 (28.45%), Postives = 177/348 (50.86%), Query Frame = 1


Query: 26   DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHS 85
            ++++    +D +L  L     +    N  L+    +   D++ +P+D  +   I ++ H 
Sbjct: 862  NQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHE 921

Query: 86   SAYAMHPGSTKVYRTLKKHYLWPGMKREIVDYVAKCLICQQVKPERQRPAGLLNPLAVLE 145
                +HPG   +   + + + W G++++I +YV  C  CQ  K    +P G L P+   E
Sbjct: 922  EGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSE 981

Query: 146  WKWEHVTMDFLFGLPRTMNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSA 205
              WE ++MDF+  LP + +G + ++V+VDR +K A  +P   + T ++ A+++  ++++ 
Sbjct: 982  RPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAY 1041

Query: 206  YGAPVSIVSDRDFRFTSKFWPSLQQALGTKLHFSTAFHPQTDGQSERTIQTLEDMLRACA 265
            +G P  I++D D  FTS+ W          + FS  + PQTDGQ+ERT QT+E +LR   
Sbjct: 1042 FGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVC 1101

Query: 266  LQFKGNWDAHLSLMEFAYNNSFHSSIGMVPYEALYG-----RRCRTPVWWDEVGERKLVG 325
                  W  H+SL++ +YNN+ HS+  M P+E ++           P + D+  E     
Sbjct: 1102 STHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENS--- 1161

Query: 326  PELVQITSENVKIIRERLKTAQDRQKRYADKRRQDL-EFEVGDKVFLK 368
                Q T +  + ++E L T   + K+Y D + Q++ EF+ GD V +K
Sbjct: 1162 ----QETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK 1201

[Close]

BLAST of MELO3C012772 vs. TrEMBL
Match: A0A061G9E7_THECC (DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_028292 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 1.8e-165
Identity = 280/453 (61.81%), Postives = 354/453 (78.15%), Query Frame = 1


Query: 9    GKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLC 68
            G+ G+L+A F VRP L+++I + Q  D  L++  ++++  +   + L  DG LM  DR+C
Sbjct: 819  GEDGTLLASFVVRPSLLNQIRELQKFDDWLKQEVQKLQDGEASEFRLSDDGTLMLRDRIC 878

Query: 69   VPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYLWPGMKREIVDYVAKCLICQQVK 128
            VP D  ++  I EEAHSSAYA+HPGSTK+Y+T+K+ Y WPGMKR+I ++VAKCLICQQ+K
Sbjct: 879  VPKDDQLRRAILEEAHSSAYALHPGSTKMYQTIKESYWWPGMKRDIAEFVAKCLICQQIK 938

Query: 129  PERQRPAGLLNPLAVLEWKWEHVTMDFLFGLPRTMNGNDGIWVIVDRLTKTARFLPVKLT 188
             E Q+ +G L PL + EWKWEHVTMDF+ GLPRT +G D IWVI+ RLTK+A FL +  T
Sbjct: 939  AEHQKSSGTLQPLPIPEWKWEHVTMDFVLGLPRTQSGKDAIWVIMGRLTKSAHFLAIHST 998

Query: 189  FTLDKLAKLYVDKIVSAYGAPVSIVSDRDFRFTSKFWPSLQQALGTKLHFSTAFHPQTDG 248
            +++++LA+LY+D++V  +G PVSIVSDRD RFTS+FWP  Q+ALGTKL FSTAFHPQ DG
Sbjct: 999  YSIERLARLYIDEVVRLHGVPVSIVSDRDPRFTSRFWPKFQEALGTKLRFSTAFHPQIDG 1058

Query: 249  QSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSIGMVPYEALYGRRCRTPV 308
            QSERTIQTLEDMLRAC + F  +WD HL L+EFAYNNSF SSIGM  YEALYGR+CRTP+
Sbjct: 1059 QSERTIQTLEDMLRACVIDFIRSWDRHLPLVEFAYNNSFQSSIGMATYEALYGRKCRTPL 1118

Query: 309  WWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKRYADKRRQDLEFEVGDKVFLKL 368
             WDEVGERKLV  EL+ +T++ VK+IRERLKTAQDRQK Y+DKRR+DLEFEV DKVFLK+
Sbjct: 1119 CWDEVGERKLVNVELIDLTNDKVKVIRERLKTAQDRQKNYSDKRRKDLEFEVDDKVFLKV 1178

Query: 369  SPWKG---FMNVFHVSMPRKYVPDPSHILEAQPVHLKENLSYEKEQIQILDKKEQVLRNK 428
             PWK      NVFH+SM +KYVPDPSHILE  P+ L E+L +E + ++ILD+K +VL+NK
Sbjct: 1179 PPWKDLDRIHNVFHISMLKKYVPDPSHILETPPIELHEDLKFEVKPVRILDRKNRVLKNK 1238

Query: 429  VIPLVKVLWRNHNTEEATWETEQAMKAQ-SHIF 458
             IP+VKVLW+N   EE TWE E  M+ Q  HIF
Sbjct: 1239 SIPMVKVLWKNARMEEMTWEVESQMRNQYPHIF 1271

[Close]

BLAST of MELO3C012772 vs. TrEMBL
Match: A0A061E5E3_THECC (DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_009998 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 1.3e-155
Identity = 276/486 (56.79%), Postives = 349/486 (71.81%), Query Frame = 1


Query: 9    GKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLC 68
            G+ G+L+A F VRP L+++I + Q  D  L++  ++++  +   + L  DG LM  DR+C
Sbjct: 1030 GEDGTLLASFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGKASEFRLSDDGTLMLRDRIC 1089

Query: 69   VPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYLWPGMKREIVDYVAKCLICQQVK 128
            VP D  ++  I EEAH SAYA+HPGSTK+YRT+K+ Y WPGM+R+I ++VAKCL CQQ+K
Sbjct: 1090 VPKDDQLRRAILEEAHYSAYALHPGSTKMYRTIKESYWWPGMERDIAEFVAKCLTCQQIK 1149

Query: 129  PERQRPAGLLNPLAVLEWKWEHVTMDFLFGLPRTMNGNDGIWVIVDRLTKTARFLPVKLT 188
             E Q+P+G L PL++ EWKWEHVTMDF+ GLPRT +G D IWVIVDRLTK+A FL +  T
Sbjct: 1150 AEHQKPSGTLQPLSIPEWKWEHVTMDFVLGLPRTQSGKDAIWVIVDRLTKSAHFLAIHST 1209

Query: 189  FTLDKLAKLYVDKIVSAYGAPVSIVSDRDFRFTSKFWPSLQQALGTKLHFSTAFHPQTDG 248
            +++++LA+LY+D+IV  +G PVSIVSDRD RFTS+FWP  Q+ALGTKL FSTAFHPQTDG
Sbjct: 1210 YSIERLARLYIDEIVRLHGVPVSIVSDRDLRFTSRFWPKFQEALGTKLRFSTAFHPQTDG 1269

Query: 249  QSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSIGMVPYEALYGRRCRTPV 308
            QSERTIQTLEDMLRAC + F G+WD HL L+EFAYNNSF SSIGM PYEALYGR+CRTP+
Sbjct: 1270 QSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSFQSSIGMAPYEALYGRKCRTPL 1329

Query: 309  WWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKRYADK--RRQDLEFEVGDKVFL 368
             WDEVGERKLV  EL+ +T++ VK+IRERLKTAQDRQK Y+DK  +  + E +  DKVFL
Sbjct: 1330 CWDEVGERKLVNVELIDLTNDKVKVIRERLKTAQDRQKNYSDKRRKDLEFEVD--DKVFL 1389

Query: 369  K---------------LSP------------------------WKGFMNVFHVSMPRKYV 428
            K               L+P                             N FHVSM +KYV
Sbjct: 1390 KVSPWKGVIRFAKRGKLNPRYIGPFHIIERIGPVAYRLELPPELDRIHNAFHVSMLKKYV 1449

Query: 429  PDPSHILEAQPVHLKENLSYEKEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETE 454
            PDPSHILE  P+ L E+L +E + I+ILD+K++VLRNK IP+VKVLW+N   EE TWE E
Sbjct: 1450 PDPSHILETPPIELHEDLKFEVQPIRILDRKDRVLRNKSIPMVKVLWKNARMEEMTWEVE 1509

[Close]

BLAST of MELO3C012772 vs. TrEMBL
Match: M5VT03_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb020037mg PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 2.7e-153
Identity = 266/428 (62.15%), Postives = 333/428 (77.80%), Query Frame = 1


Query: 42   AEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTL 101
            A  V    R + S+R D ALM  +RL VP+D+ +K +I EEAH SA+AMHPGSTK+Y TL
Sbjct: 851  ANVVANGDRTDCSVRNDEALMVGNRLYVPNDEALKREILEEAHESAFAMHPGSTKMYHTL 910

Query: 102  KKHYLWPGMKREIVDYVAKCLICQQVKPERQRPAGLLNPLAVLEWKWEHVTMDFLFGLPR 161
            ++HY WP MK+EI +YV +CLICQQVK ERQ+P+GLL PL + EWKWE +TMDF+F LPR
Sbjct: 911  REHYWWPFMKKEIAEYVRRCLICQQVKAERQKPSGLLQPLPIPEWKWERITMDFVFKLPR 970

Query: 162  TMNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPVSIVSDRDFRFT 221
            T + +DG+WVIVDRLTK+A FLPV+  ++L+KLAK+++D+IV  +G PVSIVSDRD RFT
Sbjct: 971  THSKHDGVWVIVDRLTKSAHFLPVRANYSLNKLAKIFIDEIVRLHGVPVSIVSDRDPRFT 1030

Query: 222  SKFWPSLQQALGTKLHFSTAFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEF 281
            S+FW  L +A GT+L FSTAFHPQTDGQSERTIQTLEDMLRACALQF+G+WD  L LMEF
Sbjct: 1031 SRFWTKLNEAFGTQLQFSTAFHPQTDGQSERTIQTLEDMLRACALQFRGDWDEKLPLMEF 1090

Query: 282  AYNNSFHSSIGMVPYEALYGRRCRTPVWWDEVGERKLVGPELVQITSENVKIIRERLKTA 341
            AYNNS+  SIGM P++ALYGR+CRTP +WD VGE +LV  E V++T + V+IIRERLKTA
Sbjct: 1091 AYNNSYQVSIGMSPFDALYGRQCRTPFYWDAVGEHRLVVSEDVELTKKQVQIIRERLKTA 1150

Query: 342  QDRQKRYADKRRQDLEFEVGDKVFLKLSPWKGFMN-----------VFHVSMPRKYVPDP 401
            QDRQK YAD RR+DL+FEVGD VFLKLSPWKG +            +    + ++Y+ DP
Sbjct: 1151 QDRQKSYADNRRKDLQFEVGDWVFLKLSPWKGVVRFGKRGKLSPRYIGPYEIIKRYIYDP 1210

Query: 402  SHILEAQPVHLKENLSYEKEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAM 458
            SH+LE QPV L+ + +Y ++ +QILD K QVLR++ IPLVKVLWR+H  EEATWE E  M
Sbjct: 1211 SHVLEEQPVELEVDFTYVEQPVQILDWKTQVLRSREIPLVKVLWRSHTVEEATWEPEDQM 1270

[Close]

BLAST of MELO3C012772 vs. TrEMBL
Match: M5XLP5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb019121mg PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 2.5e-146
Identity = 269/492 (54.67%), Postives = 341/492 (69.31%), Query Frame = 1


Query: 6   MSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYD 65
           + V   G+L+A   VRP+L++RI+ AQ  D  +  L  EV    R + S+R DGALM  +
Sbjct: 60  LHVDNQGALLATLHVRPVLVERILAAQSQDPLICTLRVEVANGDRTDCSVRNDGALMVGN 119

Query: 66  RLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYLWPGMKREIVDYVAKCLICQ 125
           RL VP+D+ +K +I EEAH SA+AMHPGSTK+Y TL++HY WP MK+EI +YV +CLICQ
Sbjct: 120 RLYVPNDEALKREILEEAHESAFAMHPGSTKMYHTLREHYWWPFMKKEIAEYVRRCLICQ 179

Query: 126 QVKPERQRPAGLLNPLAVLEWKWEHVTMDFLFGLPRTMNGNDGIWVIVDRLTKTARFLPV 185
           QVK ERQ+P+GLL PL + EWKWE +TMDF+F LPRT + +DG+WVIVDRLTK+A FLPV
Sbjct: 180 QVKAERQKPSGLLQPLPIPEWKWERITMDFVFKLPRTQSKHDGVWVIVDRLTKSAHFLPV 239

Query: 186 KLTFTLDKLAKLYVDKIVSAYGAPVSIVSDRDFRFTSKFWPSLQQALGTKLHFSTAFHPQ 245
           +  ++L+KLAK+++D+IV  +G PVSIVSDRD RFTS+FW  L +A GT+L FSTAFHPQ
Sbjct: 240 RANYSLNKLAKIFIDEIVRLHGVPVSIVSDRDPRFTSRFWTKLNEAFGTQLQFSTAFHPQ 299

Query: 246 TDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSIGMVPYEALYGRRCR 305
           TDGQSERTIQTLEDMLRACALQF+G+WD  L LMEFAYNNS+  SIGM P++ALYGR+CR
Sbjct: 300 TDGQSERTIQTLEDMLRACALQFRGDWDEKLPLMEFAYNNSYQVSIGMSPFDALYGRQCR 359

Query: 306 TPVWWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKRYADKRRQDLEFEVGDKVF 365
           TP +WDEVGE +LV  E V++T + V+IIRERLKTAQDRQK YAD RR+DL+FEVGD VF
Sbjct: 360 TPFYWDEVGEHRLVVSEDVKLTKKQVQIIRERLKTAQDRQKSYADNRRKDLQFEVGDWVF 419

Query: 366 LKLSPWKGFMNV-FHVSMPRKYVPDPSHILEAQPV-----------------HLKENLSY 425
           LKLSPWKG +       +  +Y+     I    PV                 H+     Y
Sbjct: 420 LKLSPWKGVVRFGKRGKLSPRYIGPYEIIERVGPVAYRLTLPSDLARLHDVFHVSMLRKY 479

Query: 426 EKEQIQILDKKEQVLR---------------------NKVIPLVKVLWRNHNTEEATWET 458
             +   +L+++   L                      ++ IPLVKVLWR+H  EEATWE 
Sbjct: 480 ISDPSHVLEEQPVELEADFTYVEQPVRILDWKTQVLRSREIPLVKVLWRSHTVEEATWEP 539

[Close]

BLAST of MELO3C012772 vs. TrEMBL
Match: A5BA10_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009489 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 9.4e-146
Identity = 259/485 (53.40%), Postives = 339/485 (69.90%), Query Frame = 1


Query: 6   MSVGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYD 65
           M V   G+L+A+F+V+P L+ RI   Q +D  L +L EEV++  +L++ L  DG L    
Sbjct: 496 MRVLDSGALIANFRVQPDLVGRIKALQKNDLNLVQLMEEVKKGSKLDFVLSDDGILRFGT 555

Query: 66  RLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYLWPGMKREIVDYVAKCLICQ 125
           RLCVP+D+ ++ ++ EEAH S +A+HP  TK+Y+ L+++Y W GMK +I  +VA+CL+CQ
Sbjct: 556 RLCVPNDEDLRRELLEEAHCSKFAIHPERTKMYKDLRQNYWWSGMKCDIAQFVAQCLVCQ 615

Query: 126 QVKPERQRPAGLLNPLAVLEWKWEHVTMDFLFGLPRTMNGNDGIWVIVDRLTKTARFLPV 185
           Q             PLA+ EWKWEH+TMDF+ GLPRT+ GN+ IWVIVDRLTK+A FLP+
Sbjct: 616 Q-------------PLAIPEWKWEHITMDFVIGLPRTLGGNNAIWVIVDRLTKSAHFLPM 675

Query: 186 KLTFTLDKLAKLYVDKIVSAYGAPVSIVSDRDFRFTSKFWPSLQQALGTKLHFSTAFHPQ 245
           K+ F+LD+LA LYV +IV  +G PVSIVSDRD RFTS+FW SLQ++LGTKL FSTAFHPQ
Sbjct: 676 KVNFSLDRLASLYVKEIVRMHGVPVSIVSDRDPRFTSRFWHSLQKSLGTKLSFSTAFHPQ 735

Query: 246 TDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSIGMVPYEALYGRRCR 305
           TDGQSER IQ LED+ RAC L  +GNWD HL L+EFAYNNSF +SIGM P+EALYGR+CR
Sbjct: 736 TDGQSERVIQVLEDLFRACILDLQGNWDDHLPLVEFAYNNSFQASIGMAPFEALYGRKCR 795

Query: 306 TPVWWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKRYADKRRQDLEFEVGDKVF 365
           +P+ W++VGERKL+GPELVQ+T E V +I+ERLK AQ R K Y D RR+DLEFEVGD VF
Sbjct: 796 SPICWNDVGERKLLGPELVQLTVEKVALIKERLKAAQSRHKSYVDHRRRDLEFEVGDHVF 855

Query: 366 LKLSPWKGF---------------------------------------MNVFHVSMPRKY 425
           LK+SP K                                          NVFHVS  RKY
Sbjct: 856 LKVSPMKSVMRFGRKGKLSPRFVGLFEILERVGTLAYKVALPPSLSKVHNVFHVSTLRKY 915

Query: 426 VPDPSHILEAQPVHLKENLSYEKEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWET 452
           + DPSH+++ +P+ + E+L+YE+  +QI+D  ++VLR+ V+ LVKV W NH+  EATWE 
Sbjct: 916 IYDPSHVVDLEPIQIFEDLTYEEVPVQIVDMMDKVLRHAVVKLVKVQWSNHSIREATWEL 967

[Close]

BLAST of MELO3C012772 vs. NCBI nr
Match: gi|590617810|ref|XP_007023888.1| (DNA/RNA polymerases superfamily protein [Theobroma cacao])

HSP 1 Score: 590.5 bits (1521), Expect = 2.6e-165
Identity = 280/453 (61.81%), Postives = 354/453 (78.15%), Query Frame = 1


Query: 9    GKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLC 68
            G+ G+L+A F VRP L+++I + Q  D  L++  ++++  +   + L  DG LM  DR+C
Sbjct: 819  GEDGTLLASFVVRPSLLNQIRELQKFDDWLKQEVQKLQDGEASEFRLSDDGTLMLRDRIC 878

Query: 69   VPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYLWPGMKREIVDYVAKCLICQQVK 128
            VP D  ++  I EEAHSSAYA+HPGSTK+Y+T+K+ Y WPGMKR+I ++VAKCLICQQ+K
Sbjct: 879  VPKDDQLRRAILEEAHSSAYALHPGSTKMYQTIKESYWWPGMKRDIAEFVAKCLICQQIK 938

Query: 129  PERQRPAGLLNPLAVLEWKWEHVTMDFLFGLPRTMNGNDGIWVIVDRLTKTARFLPVKLT 188
             E Q+ +G L PL + EWKWEHVTMDF+ GLPRT +G D IWVI+ RLTK+A FL +  T
Sbjct: 939  AEHQKSSGTLQPLPIPEWKWEHVTMDFVLGLPRTQSGKDAIWVIMGRLTKSAHFLAIHST 998

Query: 189  FTLDKLAKLYVDKIVSAYGAPVSIVSDRDFRFTSKFWPSLQQALGTKLHFSTAFHPQTDG 248
            +++++LA+LY+D++V  +G PVSIVSDRD RFTS+FWP  Q+ALGTKL FSTAFHPQ DG
Sbjct: 999  YSIERLARLYIDEVVRLHGVPVSIVSDRDPRFTSRFWPKFQEALGTKLRFSTAFHPQIDG 1058

Query: 249  QSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSIGMVPYEALYGRRCRTPV 308
            QSERTIQTLEDMLRAC + F  +WD HL L+EFAYNNSF SSIGM  YEALYGR+CRTP+
Sbjct: 1059 QSERTIQTLEDMLRACVIDFIRSWDRHLPLVEFAYNNSFQSSIGMATYEALYGRKCRTPL 1118

Query: 309  WWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKRYADKRRQDLEFEVGDKVFLKL 368
             WDEVGERKLV  EL+ +T++ VK+IRERLKTAQDRQK Y+DKRR+DLEFEV DKVFLK+
Sbjct: 1119 CWDEVGERKLVNVELIDLTNDKVKVIRERLKTAQDRQKNYSDKRRKDLEFEVDDKVFLKV 1178

Query: 369  SPWKG---FMNVFHVSMPRKYVPDPSHILEAQPVHLKENLSYEKEQIQILDKKEQVLRNK 428
             PWK      NVFH+SM +KYVPDPSHILE  P+ L E+L +E + ++ILD+K +VL+NK
Sbjct: 1179 PPWKDLDRIHNVFHISMLKKYVPDPSHILETPPIELHEDLKFEVKPVRILDRKNRVLKNK 1238

Query: 429  VIPLVKVLWRNHNTEEATWETEQAMKAQ-SHIF 458
             IP+VKVLW+N   EE TWE E  M+ Q  HIF
Sbjct: 1239 SIPMVKVLWKNARMEEMTWEVESQMRNQYPHIF 1271

[Close]

BLAST of MELO3C012772 vs. NCBI nr
Match: gi|590693615|ref|XP_007044383.1| (DNA/RNA polymerases superfamily protein [Theobroma cacao])

HSP 1 Score: 557.8 bits (1436), Expect = 1.9e-155
Identity = 276/486 (56.79%), Postives = 349/486 (71.81%), Query Frame = 1


Query: 9    GKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLC 68
            G+ G+L+A F VRP L+++I + Q  D  L++  ++++  +   + L  DG LM  DR+C
Sbjct: 1030 GEDGTLLASFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGKASEFRLSDDGTLMLRDRIC 1089

Query: 69   VPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYLWPGMKREIVDYVAKCLICQQVK 128
            VP D  ++  I EEAH SAYA+HPGSTK+YRT+K+ Y WPGM+R+I ++VAKCL CQQ+K
Sbjct: 1090 VPKDDQLRRAILEEAHYSAYALHPGSTKMYRTIKESYWWPGMERDIAEFVAKCLTCQQIK 1149

Query: 129  PERQRPAGLLNPLAVLEWKWEHVTMDFLFGLPRTMNGNDGIWVIVDRLTKTARFLPVKLT 188
             E Q+P+G L PL++ EWKWEHVTMDF+ GLPRT +G D IWVIVDRLTK+A FL +  T
Sbjct: 1150 AEHQKPSGTLQPLSIPEWKWEHVTMDFVLGLPRTQSGKDAIWVIVDRLTKSAHFLAIHST 1209

Query: 189  FTLDKLAKLYVDKIVSAYGAPVSIVSDRDFRFTSKFWPSLQQALGTKLHFSTAFHPQTDG 248
            +++++LA+LY+D+IV  +G PVSIVSDRD RFTS+FWP  Q+ALGTKL FSTAFHPQTDG
Sbjct: 1210 YSIERLARLYIDEIVRLHGVPVSIVSDRDLRFTSRFWPKFQEALGTKLRFSTAFHPQTDG 1269

Query: 249  QSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSIGMVPYEALYGRRCRTPV 308
            QSERTIQTLEDMLRAC + F G+WD HL L+EFAYNNSF SSIGM PYEALYGR+CRTP+
Sbjct: 1270 QSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSFQSSIGMAPYEALYGRKCRTPL 1329

Query: 309  WWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKRYADK--RRQDLEFEVGDKVFL 368
             WDEVGERKLV  EL+ +T++ VK+IRERLKTAQDRQK Y+DK  +  + E +  DKVFL
Sbjct: 1330 CWDEVGERKLVNVELIDLTNDKVKVIRERLKTAQDRQKNYSDKRRKDLEFEVD--DKVFL 1389

Query: 369  K---------------LSP------------------------WKGFMNVFHVSMPRKYV 428
            K               L+P                             N FHVSM +KYV
Sbjct: 1390 KVSPWKGVIRFAKRGKLNPRYIGPFHIIERIGPVAYRLELPPELDRIHNAFHVSMLKKYV 1449

Query: 429  PDPSHILEAQPVHLKENLSYEKEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETE 454
            PDPSHILE  P+ L E+L +E + I+ILD+K++VLRNK IP+VKVLW+N   EE TWE E
Sbjct: 1450 PDPSHILETPPIELHEDLKFEVQPIRILDRKDRVLRNKSIPMVKVLWKNARMEEMTWEVE 1509

[Close]

BLAST of MELO3C012772 vs. NCBI nr
Match: gi|595790143|ref|XP_007198824.1| (hypothetical protein PRUPE_ppb020037mg [Prunus persica])

HSP 1 Score: 550.1 bits (1416), Expect = 3.9e-153
Identity = 266/428 (62.15%), Postives = 333/428 (77.80%), Query Frame = 1


Query: 42   AEEVRQNQRLNYSLRGDGALMKYDRLCVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTL 101
            A  V    R + S+R D ALM  +RL VP+D+ +K +I EEAH SA+AMHPGSTK+Y TL
Sbjct: 851  ANVVANGDRTDCSVRNDEALMVGNRLYVPNDEALKREILEEAHESAFAMHPGSTKMYHTL 910

Query: 102  KKHYLWPGMKREIVDYVAKCLICQQVKPERQRPAGLLNPLAVLEWKWEHVTMDFLFGLPR 161
            ++HY WP MK+EI +YV +CLICQQVK ERQ+P+GLL PL + EWKWE +TMDF+F LPR
Sbjct: 911  REHYWWPFMKKEIAEYVRRCLICQQVKAERQKPSGLLQPLPIPEWKWERITMDFVFKLPR 970

Query: 162  TMNGNDGIWVIVDRLTKTARFLPVKLTFTLDKLAKLYVDKIVSAYGAPVSIVSDRDFRFT 221
            T + +DG+WVIVDRLTK+A FLPV+  ++L+KLAK+++D+IV  +G PVSIVSDRD RFT
Sbjct: 971  THSKHDGVWVIVDRLTKSAHFLPVRANYSLNKLAKIFIDEIVRLHGVPVSIVSDRDPRFT 1030

Query: 222  SKFWPSLQQALGTKLHFSTAFHPQTDGQSERTIQTLEDMLRACALQFKGNWDAHLSLMEF 281
            S+FW  L +A GT+L FSTAFHPQTDGQSERTIQTLEDMLRACALQF+G+WD  L LMEF
Sbjct: 1031 SRFWTKLNEAFGTQLQFSTAFHPQTDGQSERTIQTLEDMLRACALQFRGDWDEKLPLMEF 1090

Query: 282  AYNNSFHSSIGMVPYEALYGRRCRTPVWWDEVGERKLVGPELVQITSENVKIIRERLKTA 341
            AYNNS+  SIGM P++ALYGR+CRTP +WD VGE +LV  E V++T + V+IIRERLKTA
Sbjct: 1091 AYNNSYQVSIGMSPFDALYGRQCRTPFYWDAVGEHRLVVSEDVELTKKQVQIIRERLKTA 1150

Query: 342  QDRQKRYADKRRQDLEFEVGDKVFLKLSPWKGFMN-----------VFHVSMPRKYVPDP 401
            QDRQK YAD RR+DL+FEVGD VFLKLSPWKG +            +    + ++Y+ DP
Sbjct: 1151 QDRQKSYADNRRKDLQFEVGDWVFLKLSPWKGVVRFGKRGKLSPRYIGPYEIIKRYIYDP 1210

Query: 402  SHILEAQPVHLKENLSYEKEQIQILDKKEQVLRNKVIPLVKVLWRNHNTEEATWETEQAM 458
            SH+LE QPV L+ + +Y ++ +QILD K QVLR++ IPLVKVLWR+H  EEATWE E  M
Sbjct: 1211 SHVLEEQPVELEVDFTYVEQPVQILDWKTQVLRSREIPLVKVLWRSHTVEEATWEPEDQM 1270

[Close]

BLAST of MELO3C012772 vs. NCBI nr
Match: gi|672184346|ref|XP_008812481.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103723366 [Phoenix dactylifera])

HSP 1 Score: 538.9 bits (1387), Expect = 9.0e-150
Identity = 256/442 (57.92%), Postives = 333/442 (75.34%), Query Frame = 1


Query: 12   GSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRLCVPS 71
            GS++    V+P LI+RI  AQ  DA L +L  +V +  R    +  DG L    RLCVP 
Sbjct: 803  GSMLTSLLVQPTLIERIKTAQQTDAHLCRLRNDVERGLRPELRIHPDGTLRFGCRLCVPK 862

Query: 72   DQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYLWPGMKREIVDYVAKCLICQQVKPER 131
            D  +K +I EEAH S +++HPGSTK+Y  L++H+ W GMKREI  +VA+CL+CQQVK E 
Sbjct: 863  DADLKREILEEAHQSRFSIHPGSTKMYTDLREHFWWNGMKREIAGFVARCLVCQQVKAEH 922

Query: 132  QRPAGLLNPLAVLEWKWEHVTMDFLFGLPRTMNGNDGIWVIVDRLTKTARFLPVKLTFTL 191
            QRPAGLL PL + EWKWEH+TMDF+ GLPRT+  ND +WVIVDRLTK+A FLP ++  +L
Sbjct: 923  QRPAGLLEPLEIPEWKWEHITMDFVIGLPRTVRRNDAVWVIVDRLTKSAHFLPFRVGTSL 982

Query: 192  DKLAKLYVDKIVSAYGAPVSIVSDRDFRFTSKFWPSLQQALGTKLHFSTAFHPQTDGQSE 251
            DKLA+ Y+D IV  +GAPVSIVSDRD RF S FW S Q A+GT L  STA+HPQTDGQSE
Sbjct: 983  DKLAQRYIDDIVRLHGAPVSIVSDRDPRFVSGFWRSFQTAMGTDLRLSTAYHPQTDGQSE 1042

Query: 252  RTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSIGMVPYEALYGRRCRTPVWWD 311
            RTIQTLEDMLR C +   G WD H+SL+EFAYNNS+HSSI M PYEALYGR+CR+P+ WD
Sbjct: 1043 RTIQTLEDMLRTCTVDLGGCWDDHISLVEFAYNNSYHSSIQMAPYEALYGRKCRSPLHWD 1102

Query: 312  EVGERKLVGPELVQITSENVKIIRERLKTAQDRQKRYADKRRQDLEFEVGDKVFLKLSPW 371
            +VGE+KL+GPELVQI  E + +IR+RLK AQDRQK +ADK+R++++F+ GD VFLK+S  
Sbjct: 1103 DVGEKKLLGPELVQIAKEKILLIRKRLKAAQDRQKSWADKKRREVKFQEGDFVFLKVSSS 1162

Query: 372  KGFMNVFHVSMPRKYVPDPSHILEAQPVHLKENLSYEKEQIQILDKKEQVLRNKVIPLVK 431
            KG +        R+Y+PDPSHI++ +P+ +  +L+YE+  ++I+D+KEQVLR ++IP VK
Sbjct: 1163 KGVL--------RRYIPDPSHIVQHEPLQIDRDLTYEEYPLRIIDQKEQVLRRRIIPYVK 1222

Query: 432  VLWRNHNTEEATWETEQAMKAQ 454
            V W +H+  EATWE E+ M+A+
Sbjct: 1223 VQWSSHSEREATWELEEEMRAR 1236

[Close]

BLAST of MELO3C012772 vs. NCBI nr
Match: gi|702455653|ref|XP_010026793.1| (PREDICTED: uncharacterized protein LOC104417177 [Eucalyptus grandis])

HSP 1 Score: 526.9 bits (1356), Expect = 3.6e-146
Identity = 253/444 (56.98%), Postives = 328/444 (73.87%), Query Frame = 1


Query: 8    VGKLGSLVAHFQVRPILIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKYDRL 67
            VG L +LVA  ++ P +  +I   Q  D+ ++K+ +E  + ++ ++ +  DG L    RL
Sbjct: 1004 VGHLSNLVATLRIEPEVQVKIRTLQQMDSDVQKILQEDAEKRKADFQISEDGTLRFQGRL 1063

Query: 68   CVPSDQTIKDQISEEAHSSAYAMHPGSTKVYRTLKKHYLWPGMKREIVDYVAKCLICQQV 127
             VP D  ++++I  EAH S Y++HPGSTK+Y+ L++HY W GMK +I  +VAKCL CQQV
Sbjct: 1064 VVPDDVELREEILSEAHRSNYSIHPGSTKMYQNLRQHYWWCGMKADIAKHVAKCLTCQQV 1123

Query: 128  KPERQRPAGLLNPLAVLEWKWEHVTMDFLFGLPRTMNGNDGIWVIVDRLTKTARFLPVKL 187
            K +  +P GLL PL + EWKWEH+TMDF+ GLPR+  GND IWV+VDRLTK+A F+ V+ 
Sbjct: 1124 KAQHCKPGGLLRPLEIPEWKWEHITMDFVTGLPRSQRGNDSIWVVVDRLTKSAHFIAVRR 1183

Query: 188  TFTLDKLAKLYVDKIVSAYGAPVSIVSDRDFRFTSKFWPSLQQALGTKLHFSTAFHPQTD 247
              +LD+LA LYV ++V  +G PV+I SDRD RFT+ FW SLQ ALGTKL +STA+HPQTD
Sbjct: 1184 DLSLDRLADLYVRQVVRMHGVPVTITSDRDPRFTAAFWKSLQSALGTKLQYSTAYHPQTD 1243

Query: 248  GQSERTIQTLEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSIGMVPYEALYGRRCRTP 307
            GQSERTIQTLEDMLRAC L FKG+W+  L L+EFAYNNS+  SI M P+EALYGR CRTP
Sbjct: 1244 GQSERTIQTLEDMLRACVLDFKGSWEEQLHLVEFAYNNSYQQSIQMAPFEALYGRACRTP 1303

Query: 308  VWWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRQKRYADKRRQDLEFEVGDKVFLK 367
            V WDEVGERK+ GPELVQ + E V +IR RLKTAQ RQK YADKRR+ LEF+VG+ VFLK
Sbjct: 1304 VCWDEVGERKITGPELVQQSVEAVAVIRNRLKTAQSRQKSYADKRRRPLEFQVGEHVFLK 1363

Query: 368  LSPWKGFMNVFHVSMPRKYVPDPSHILEAQPVHLKENLSYEKEQIQILDKKEQVLRNKVI 427
            +SP +G        M RKY PDP+H+L    + + + +SY +  +QI+D+KEQVLR K I
Sbjct: 1364 VSPMRG--------MLRKYEPDPAHVLNFAELDVDDKVSYVESPVQIVDRKEQVLRTKTI 1423

Query: 428  PLVKVLWRNHNTEEATWETEQAMK 452
            PLVKV+W++H TE ATWETE +M+
Sbjct: 1424 PLVKVVWQHHGTEGATWETEDSMR 1439

The following BLAST results are available for this feature:

BLAST of MELO3C012772 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YG31B_YEAST	3.2e-46	36.50	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
YI31B_YEAST	9.3e-46	36.20	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
TF212_SCHPO	6.0e-45	28.45	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
TF22_SCHPO	6.0e-45	28.45	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF21_SCHPO	6.0e-45	28.45	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MELO3C012772 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061G9E7_THECC	1.8e-165	61.81	DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_028292 PE=4 SV...	[more]
A0A061E5E3_THECC	1.3e-155	56.79	DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_009998 PE=4 SV...	[more]
M5VT03_PRUPE	2.7e-153	62.15	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb020037mg PE=4 SV=1	[more]
M5XLP5_PRUPE	2.5e-146	54.67	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb019121mg PE=4 SV=1	[more]
A5BA10_VITVI	9.4e-146	53.40	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009489 PE=4 SV=1	[more]

BLAST of MELO3C012772 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|590617810\|ref\|XP_007023888.1\|	2.6e-165	61.81	DNA/RNA polymerases superfamily protein [Theobroma cacao]	[more]
gi\|590693615\|ref\|XP_007044383.1\|	1.9e-155	56.79	DNA/RNA polymerases superfamily protein [Theobroma cacao]	[more]
gi\|595790143\|ref\|XP_007198824.1\|	3.9e-153	62.15	hypothetical protein PRUPE_ppb020037mg [Prunus persica]	[more]
gi\|672184346\|ref\|XP_008812481.1\|	9.0e-150	57.92	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103723366 [Phoenix da...	[more]
gi\|702455653\|ref\|XP_010026793.1\|	3.6e-146	56.98	PREDICTED: uncharacterized protein LOC104417177 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0015074	DNA integration

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012772T1	MELO3C012772T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 149..260 score: 2.
IPR001584	Integrase, catalytic core	PROFILE	PS50994	INTEGRASE	coord: 136..303 score: 18
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 148..307 score: 3.2
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 139..297 score: 1.39
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 14..458 score: 2.4E
None	No IPR available	PANTHER	PTHR24559:SF207	SUBFAMILY NOT NAMED	coord: 14..458 score: 2.4E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C012772	Cucurbita pepo (Zucchini)	cpemeB127
MELO3C012772	Bottle gourd (USVL1VR-Ls)	lsimeB201
MELO3C012772	Cucumber (Gy14) v2	cgybmeB481
MELO3C012772	Silver-seed gourd	carmeB0433
MELO3C012772	Cucumber (Chinese Long) v3	cucmeB560
MELO3C012772	Watermelon (97103) v2	mewmbB219
MELO3C012772	Wax gourd	mewgoB262
MELO3C012772	Cucumber (Gy14) v1	cgymeB082
MELO3C012772	Cucurbita moschata (Rifu)	cmomeB322
MELO3C012772	Wild cucumber (PI 183967)	cpimeB549
MELO3C012772	Cucumber (Chinese Long) v2	cumeB543
MELO3C012772	Watermelon (Charleston Gray)	mewcgB173
MELO3C012772	Watermelon (97103) v1	mewmB194