MELO3C012771 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C012771
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRetrotransposon protein, putative, Ty3-gypsy subclass
Locationchr1 : 23423997 .. 23424542 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCAGTAAATTGTTGAGGAAGGGTTGTACGGCTTACCTAGCAAATGTGATAGATACACAGGTTAGTAAGTTGAAGCTTGAAGATATACCAGTGGTAAGAGAATTCCCAGATGTATTTCCTGAAGAGTTATCAGGACTACCGTCTGATAGAGAGATTGAATTCTCAATTGATTTAGTGCCTGGAACGGAACCCATTTCACAATCTCCTTATAGAATGGCACCGATGGAACTGAGAGAGCTAAAGTCGCAGTTGCAGGAATTAGTGGATACGGGATTTATCCGACCTAGTGCATCTCCGTGGGGTGCACCGGTGTTGTTTGTTAAAAAGAAGGATGGTACATTAAGGTTATGTATTGACTACCGGCAGTTAAATAAGGTAACAATACATAACAAATATCCTTTGCCCCGAATAGATGATTTGTTTGATCAGCTTCATGGTGCCTCTGTATTCTCTAAGATTGACTTGAGATCAGGTTATCATCAGTTGAAAGTTAAAGAGTCAGATATCCTGAAAAACAGCCTTTCGAACGAGATATGGGCATTATGA

mRNA sequence

GCCAGTAAATTGTTGAGGAAGGGTTGTACGGCTTACCTAGCAAATGTGATAGATACACAGGTTAGTAAGTTGAAGCTTGAAGATATACCAGTGGTAAGAGAATTCCCAGATGTATTTCCTGAAGAGTTATCAGGACTACCGTCTGATAGAGAGATTGAATTCTCAATTGATTTAGTGCCTGGAACGGAACCCATTTCACAATCTCCTTATAGAATGGCACCGATGGAACTGAGAGAGCTAAAGTCGCAGTTGCAGGAATTAGTGGATACGGGATTTATCCGACCTAGTGCATCTCCGTGGGGTGCACCGGTGTTGTTTGTTAAAAAGAAGGATGGTACATTAAGGTTATGTATTGACTACCGGCAGTTAAATAAGGTAACAATACATAACAAATATCCTTTGCCCCGAATAGATGATTTGTTTGATCAGCTTCATGGTGCCTCTGTATTCTCTAAGATTGACTTGAGATCAGGTTATCATCAGTTGAAAGTTAAAGAGTCAGATATCCTGAAAAACAGCCTTTCGAACGAGATATGGGCATTATGA

Coding sequence (CDS)

GCCAGTAAATTGTTGAGGAAGGGTTGTACGGCTTACCTAGCAAATGTGATAGATACACAGGTTAGTAAGTTGAAGCTTGAAGATATACCAGTGGTAAGAGAATTCCCAGATGTATTTCCTGAAGAGTTATCAGGACTACCGTCTGATAGAGAGATTGAATTCTCAATTGATTTAGTGCCTGGAACGGAACCCATTTCACAATCTCCTTATAGAATGGCACCGATGGAACTGAGAGAGCTAAAGTCGCAGTTGCAGGAATTAGTGGATACGGGATTTATCCGACCTAGTGCATCTCCGTGGGGTGCACCGGTGTTGTTTGTTAAAAAGAAGGATGGTACATTAAGGTTATGTATTGACTACCGGCAGTTAAATAAGGTAACAATACATAACAAATATCCTTTGCCCCGAATAGATGATTTGTTTGATCAGCTTCATGGTGCCTCTGTATTCTCTAAGATTGACTTGAGATCAGGTTATCATCAGTTGAAAGTTAAAGAGTCAGATATCCTGAAAAACAGCCTTTCGAACGAGATATGGGCATTATGA

Protein sequence

ASKLLRKGCTAYLANVIDTQVSKLKLEDIPVVREFPDVFPEELSGLPSDREIEFSIDLVPGTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESDILKNSLSNEIWAL*
Homology
[Close]
BLAST of MELO3C012771 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-24
Identity = 54/134 (40.30%), Postives = 81/134 (60.45%), Query Frame = 1 

Query: 40  PEELSGLPSDREIEFSIDLVPGTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASP 99
           P +++ +P    ++  I++ PG       PY +     +E+   +Q+L+D  FI PS SP
Sbjct: 576 PADINNIP----VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 635

Query: 100 WGAPVLFVKKKDGTLRLCIDYRQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGY 159
             +PV+ V KKDGT RLC+DYR LNK TI + +PLPRID+L  ++  A +F+ +DL SGY
Sbjct: 636 CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 695

Query: 160 HQLKVKESDILKNS 174
           HQ+ ++  D  K +
Sbjct: 696 HQIPMEPKDRYKTA 705

[Close]
BLAST of MELO3C012771 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-24
Identity = 54/134 (40.30%), Postives = 81/134 (60.45%), Query Frame = 1 

Query: 40  PEELSGLPSDREIEFSIDLVPGTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASP 99
           P +++ +P    ++  I++ PG       PY +     +E+   +Q+L+D  FI PS SP
Sbjct: 602 PADINNIP----VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 661

Query: 100 WGAPVLFVKKKDGTLRLCIDYRQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGY 159
             +PV+ V KKDGT RLC+DYR LNK TI + +PLPRID+L  ++  A +F+ +DL SGY
Sbjct: 662 CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 721

Query: 160 HQLKVKESDILKNS 174
           HQ+ ++  D  K +
Sbjct: 722 HQIPMEPKDRYKTA 731

[Close]
BLAST of MELO3C012771 vs. Swiss-Prot
Match: POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster GN=POL PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.0e-20
Identity = 59/166 (35.54%), Postives = 89/166 (53.61%), Query Frame = 1 

Query: 33  REFPDVFPEELSGLPSDREIEFSIDLVPGT--------------EPISQSPYRMAPMELR 92
           + FP++F  +L  + S+    F+++  P T              EP+    YR    ++ 
Sbjct: 269 KNFPELFKSQLENICSEYIDIFALESEPITVNNLYKQQLRLKDDEPVYTKNYRSPHSQVE 328

Query: 93  ELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGT------LRLCIDYRQLNKVTIHNKY 152
           E+++Q+Q+L+    + PS S + +P+L V KK          RL IDYRQ+NK  + +K+
Sbjct: 329 EIQAQVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKF 388

Query: 153 PLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKES--DILKNSLSN 177
           PLPRIDD+ DQL  A  FS +DL SG+HQ+++ E   DI   S SN
Sbjct: 389 PLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSN 434

[Close]
BLAST of MELO3C012771 vs. Swiss-Prot
Match: TF29_SCHPO (Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-9 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19
Identity = 52/156 (33.33%), Postives = 89/156 (57.05%), Query Frame = 1 

Query: 15  NVIDTQVSKLKLEDIPVVREFPDVFPE-ELSGLPSD-REIEFSIDLVPGTEPISQSPYRM 74
           N +   V + +L DI   +EF D+  E     LP   + +EF ++L      +    Y +
Sbjct: 363 NKVSNIVKEPELPDI--YKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPL 422

Query: 75  APMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIHNKY 134
            P +++ +  ++ + + +G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N Y
Sbjct: 423 PPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIY 482

Query: 135 PLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESD 169
           PLP I+ L  ++ G+++F+K+DL+S YH ++V++ D
Sbjct: 483 PLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGD 516

[Close]
BLAST of MELO3C012771 vs. Swiss-Prot
Match: TF211_SCHPO (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19
Identity = 52/156 (33.33%), Postives = 89/156 (57.05%), Query Frame = 1 

Query: 15  NVIDTQVSKLKLEDIPVVREFPDVFPE-ELSGLPSD-REIEFSIDLVPGTEPISQSPYRM 74
           N +   V + +L DI   +EF D+  E     LP   + +EF ++L      +    Y +
Sbjct: 363 NKVSNIVKEPELPDI--YKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPL 422

Query: 75  APMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIHNKY 134
            P +++ +  ++ + + +G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N Y
Sbjct: 423 PPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIY 482

Query: 135 PLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESD 169
           PLP I+ L  ++ G+++F+K+DL+S YH ++V++ D
Sbjct: 483 PLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGD 516

[Close]
BLAST of MELO3C012771 vs. TrEMBL
Match: M5WLY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021229mg PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.6e-72
Identity = 131/173 (75.72%), Postives = 154/173 (89.02%), Query Frame = 1 

Query: 1   ASKLLRKGCTAYLANVIDTQVSKLKLEDIPVVREFPDVFPEELSGLPSDREIEFSIDLVP 60
           A +LLRKGC+ Y+A+VIDT+ + L+LEDIPV+++FPDVFPE+L GLP  REIEF I+L P
Sbjct: 202 AKRLLRKGCSGYIAHVIDTRDNGLRLEDIPVIQDFPDVFPEDLPGLPPHREIEFVIELAP 261

Query: 61  GTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDY 120
           GT PISQ+PYRMAP ELRELK+QLQELVD GFIRPS SPWGAPVLFVKKKDGT+RLC+DY
Sbjct: 262 GTNPISQAPYRMAPAELRELKTQLQELVDKGFIRPSFSPWGAPVLFVKKKDGTMRLCVDY 321

Query: 121 RQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESDILKNS 174
           RQLNK+T+ N+YPLPRIDDLFDQL GA VFSKIDLRSGYHQL+V+E D+ K +
Sbjct: 322 RQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREEDMPKTA 374

[Close]
BLAST of MELO3C012771 vs. TrEMBL
Match: M5WXB0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa014973mg PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.9e-71
Identity = 128/173 (73.99%), Postives = 153/173 (88.44%), Query Frame = 1 

Query: 1   ASKLLRKGCTAYLANVIDTQVSKLKLEDIPVVREFPDVFPEELSGLPSDREIEFSIDLVP 60
           A +LLRKGC+ Y+A+VIDT+ + L+LEDIP++++FPDVFPE+L G+P  REIEF I+L P
Sbjct: 305 AKRLLRKGCSGYIAHVIDTRDNGLRLEDIPIIQDFPDVFPEDLPGVPPQREIEFVIELAP 364

Query: 61  GTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDY 120
           GT PISQ+PYRMAP ELRELK+QLQELVD GFI PS SPWGAPVLFVKKKDGT+RLC+DY
Sbjct: 365 GTNPISQAPYRMAPAELRELKTQLQELVDKGFICPSFSPWGAPVLFVKKKDGTMRLCVDY 424

Query: 121 RQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESDILKNS 174
           RQLNK+T+ N+YPLPRIDDLFDQL GA VFSKIDLRSGYHQL+V+E D+ K +
Sbjct: 425 RQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREEDVPKTA 477

[Close]
BLAST of MELO3C012771 vs. TrEMBL
Match: M5Y103_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016115mg PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.2e-70
Identity = 131/173 (75.72%), Postives = 151/173 (87.28%), Query Frame = 1 

Query: 1   ASKLLRKGCTAYLANVIDTQVSKLKLEDIPVVREFPDVFPEELSGLPSDREIEFSIDLVP 60
           A +LLRKGC++Y+A VIDT+ + L+LEDI VV++FPDVFPE+L GLP  REIEF I+L P
Sbjct: 312 AKRLLRKGCSSYIAYVIDTRDNGLRLEDIRVVQDFPDVFPEDLPGLPHHREIEFVIELAP 371

Query: 61  GTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDY 120
           GT PISQ+PYRMAP ELRELK QLQELVD GFIR S SPWGAPVLFVKKKDGT+RLCIDY
Sbjct: 372 GTNPISQAPYRMAPAELRELKIQLQELVDKGFIRLSFSPWGAPVLFVKKKDGTMRLCIDY 431

Query: 121 RQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESDILKNS 174
           RQLNK+T+ N+YPLPRIDDLFDQL GA VFSKIDLRSGYHQL+V+E D+ K +
Sbjct: 432 RQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREEDVTKTA 484

[Close]
BLAST of MELO3C012771 vs. TrEMBL
Match: A0A061FQA2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_043787 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.2e-70
Identity = 131/173 (75.72%), Postives = 149/173 (86.13%), Query Frame = 1 

Query: 1   ASKLLRKGCTAYLANVIDTQVSKLKLEDIPVVREFPDVFPEELSGLPSDREIEFSIDLVP 60
           ASKL++KG   YLA VIDT   + KLED+P+V EFPDVFP++L GLP DRE+EF IDL+P
Sbjct: 287 ASKLVQKGYPTYLAYVIDTSKGEPKLEDVPIVSEFPDVFPDDLPGLPPDRELEFPIDLLP 346

Query: 61  GTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDY 120
           GT PIS  PYRMAP EL+ELK QLQELVD GFIRPS SPWGAPVLFVKKKDGTLRLCIDY
Sbjct: 347 GTAPISIPPYRMAPAELKELKVQLQELVDKGFIRPSISPWGAPVLFVKKKDGTLRLCIDY 406

Query: 121 RQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESDILKNS 174
           RQLN++TI NKYPLPRIDDLFDQL GA+VFSK+DLRSGYHQL++KE D+ K +
Sbjct: 407 RQLNRMTIKNKYPLPRIDDLFDQLQGATVFSKVDLRSGYHQLRIKEQDVPKTA 459

[Close]
BLAST of MELO3C012771 vs. TrEMBL
Match: A0A061DW51_THECC (DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_003698 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.5e-70
Identity = 129/171 (75.44%), Postives = 149/171 (87.13%), Query Frame = 1 

Query: 1   ASKLLRKGCTAYLANVIDTQVSKLKLEDIPVVREFPDVFPEELSGLPSDREIEFSIDLVP 60
           ASKL++KG   YLA VIDT   + KLED+P+V EFPDVFP++L GLP DRE+EF IDL+P
Sbjct: 477 ASKLVQKGYPTYLAYVIDTSKGEPKLEDVPIVSEFPDVFPDDLPGLPPDRELEFPIDLLP 536

Query: 61  GTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDY 120
           GT PIS  PYRMAP EL+ELK QLQELVD GFIRPS SPWGAP+LFVKKKDGTLRLCIDY
Sbjct: 537 GTAPISIPPYRMAPAELKELKVQLQELVDKGFIRPSISPWGAPILFVKKKDGTLRLCIDY 596

Query: 121 RQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESDILK 172
           RQLN++TI NKYPLPRIDD+FDQL GA+VFSK++LRSGYHQL++KE D+LK
Sbjct: 597 RQLNRMTIKNKYPLPRIDDIFDQLQGATVFSKVNLRSGYHQLRIKEQDVLK 647

[Close]
BLAST of MELO3C012771 vs. NCBI nr
Match: gi|595885005|ref|XP_007213082.1| (hypothetical protein PRUPE_ppa021229mg [Prunus persica])

HSP 1 Score: 279.6 bits (714), Expect = 3.8e-72
Identity = 131/173 (75.72%), Postives = 154/173 (89.02%), Query Frame = 1 

Query: 1   ASKLLRKGCTAYLANVIDTQVSKLKLEDIPVVREFPDVFPEELSGLPSDREIEFSIDLVP 60
           A +LLRKGC+ Y+A+VIDT+ + L+LEDIPV+++FPDVFPE+L GLP  REIEF I+L P
Sbjct: 202 AKRLLRKGCSGYIAHVIDTRDNGLRLEDIPVIQDFPDVFPEDLPGLPPHREIEFVIELAP 261

Query: 61  GTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDY 120
           GT PISQ+PYRMAP ELRELK+QLQELVD GFIRPS SPWGAPVLFVKKKDGT+RLC+DY
Sbjct: 262 GTNPISQAPYRMAPAELRELKTQLQELVDKGFIRPSFSPWGAPVLFVKKKDGTMRLCVDY 321

Query: 121 RQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESDILKNS 174
           RQLNK+T+ N+YPLPRIDDLFDQL GA VFSKIDLRSGYHQL+V+E D+ K +
Sbjct: 322 RQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREEDMPKTA 374

[Close]
BLAST of MELO3C012771 vs. NCBI nr
Match: gi|764568333|ref|XP_011462316.1| (PREDICTED: uncharacterized protein LOC105350950 [Fragaria vesca subsp. vesca])

HSP 1 Score: 276.9 bits (707), Expect = 2.5e-71
Identity = 129/173 (74.57%), Postives = 154/173 (89.02%), Query Frame = 1 

Query: 1   ASKLLRKGCTAYLANVIDTQVSKLKLEDIPVVREFPDVFPEELSGLPSDREIEFSIDLVP 60
           A KLL +GC AYLA V+DT++  LK+EDIPVV+EFP+VFPEEL GLP  REIEF+I+L+P
Sbjct: 329 AGKLLSRGCQAYLAQVVDTRMGVLKVEDIPVVKEFPNVFPEELPGLPPTREIEFTIELLP 388

Query: 61  GTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDY 120
           GT PISQ+PYRMAP EL+ELK QLQELVD GFIRPS SPWGAP+LFV+KKDG++RLC+DY
Sbjct: 389 GTAPISQAPYRMAPAELKELKVQLQELVDKGFIRPSMSPWGAPILFVRKKDGSMRLCVDY 448

Query: 121 RQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESDILKNS 174
           R+LN+VT+ NKYPLPRIDDLFDQL GA VFSKIDLRSGYHQL++++SDI K +
Sbjct: 449 RKLNQVTVKNKYPLPRIDDLFDQLRGAKVFSKIDLRSGYHQLRIRDSDIAKTA 501

[Close]
BLAST of MELO3C012771 vs. NCBI nr
Match: gi|595852081|ref|XP_007210241.1| (hypothetical protein PRUPE_ppa014973mg, partial [Prunus persica])

HSP 1 Score: 276.2 bits (705), Expect = 4.2e-71
Identity = 128/173 (73.99%), Postives = 153/173 (88.44%), Query Frame = 1 

Query: 1   ASKLLRKGCTAYLANVIDTQVSKLKLEDIPVVREFPDVFPEELSGLPSDREIEFSIDLVP 60
           A +LLRKGC+ Y+A+VIDT+ + L+LEDIP++++FPDVFPE+L G+P  REIEF I+L P
Sbjct: 305 AKRLLRKGCSGYIAHVIDTRDNGLRLEDIPIIQDFPDVFPEDLPGVPPQREIEFVIELAP 364

Query: 61  GTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDY 120
           GT PISQ+PYRMAP ELRELK+QLQELVD GFI PS SPWGAPVLFVKKKDGT+RLC+DY
Sbjct: 365 GTNPISQAPYRMAPAELRELKTQLQELVDKGFICPSFSPWGAPVLFVKKKDGTMRLCVDY 424

Query: 121 RQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESDILKNS 174
           RQLNK+T+ N+YPLPRIDDLFDQL GA VFSKIDLRSGYHQL+V+E D+ K +
Sbjct: 425 RQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREEDVPKTA 477

[Close]
BLAST of MELO3C012771 vs. NCBI nr
Match: gi|1009116226|ref|XP_015874658.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107411564, partial [Ziziphus jujuba])

HSP 1 Score: 275.4 bits (703), Expect = 7.1e-71
Identity = 133/173 (76.88%), Postives = 152/173 (87.86%), Query Frame = 1 

Query: 1   ASKLLRKGCTAYLANVIDTQVSKLKLEDIPVVREFPDVFPEELSGLPSDREIEFSIDLVP 60
           A KLL KGC  YLA+VIDT+VS ++LED+PVVR+FP+VFPEEL GLP +RE++F I+L+P
Sbjct: 267 AKKLLNKGCQGYLAHVIDTRVSGVRLEDMPVVRDFPNVFPEELPGLPPEREVDFPIELIP 326

Query: 61  GTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDY 120
           GT PIS  PYRMAP ELRELK QLQ+LVD GFIRPS SPWGAPVLFVKKKDG+LRLCIDY
Sbjct: 327 GTVPISLPPYRMAPTELRELKVQLQDLVDKGFIRPSISPWGAPVLFVKKKDGSLRLCIDY 386

Query: 121 RQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESDILKNS 174
           RQLNKVTI N+YPLPRID LFDQL GA VFSKIDLRSGYHQL+++ESDI K +
Sbjct: 387 RQLNKVTIPNRYPLPRIDYLFDQLQGAKVFSKIDLRSGYHQLRIRESDIPKTA 439

[Close]
BLAST of MELO3C012771 vs. NCBI nr
Match: gi|672163957|ref|XP_008801842.1| (PREDICTED: uncharacterized protein LOC103715854 [Phoenix dactylifera])

HSP 1 Score: 273.5 bits (698), Expect = 2.7e-70
Identity = 131/173 (75.72%), Postives = 152/173 (87.86%), Query Frame = 1 

Query: 1   ASKLLRKGCTAYLANVIDTQVSKLKLEDIPVVREFPDVFPEELSGLPSDREIEFSIDLVP 60
           A+K L+KGCTAYLA V+DTQ  ++KLEDIPVVRE+PDVFPEEL GLP +RE+EF+IDL P
Sbjct: 353 AAKALKKGCTAYLACVVDTQ-KEIKLEDIPVVREYPDVFPEELPGLPPNREVEFTIDLTP 412

Query: 61  GTEPISQSPYRMAPMELRELKSQLQELVDTGFIRPSASPWGAPVLFVKKKDGTLRLCIDY 120
           G  PIS++PYRMAP ELRELK+QLQEL+D  FI+PS SPWGAPVLFVKKKDG++RLCIDY
Sbjct: 413 GAGPISKAPYRMAPAELRELKTQLQELLDKKFIQPSVSPWGAPVLFVKKKDGSMRLCIDY 472

Query: 121 RQLNKVTIHNKYPLPRIDDLFDQLHGASVFSKIDLRSGYHQLKVKESDILKNS 174
           R+LNK+TI NKYPLPRIDDLFDQL GA VF KIDLRSGYHQLK+K  D+ K +
Sbjct: 473 RELNKITIKNKYPLPRIDDLFDQLQGAQVFFKIDLRSGYHQLKIKPDDVPKTA 524

The following BLAST results are available for this feature:
BLAST of MELO3C012771 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YG31B_YEAST1.0e-2440.30Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
YI31B_YEAST1.0e-2440.30Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
POL4_DROME2.0e-2035.54Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste... [more]
TF29_SCHPO2.2e-1933.33Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF211_SCHPO2.2e-1933.33Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
BLAST of MELO3C012771 vs. TrEMBL
Match NameE-valueIdentityDescription
M5WLY8_PRUPE2.6e-7275.72Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021229mg PE=4 SV=1[more]
M5WXB0_PRUPE2.9e-7173.99Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa014973mg PE=4 S... [more]
M5Y103_PRUPE3.2e-7075.72Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016115mg PE=4 SV=1[more]
A0A061FQA2_THECC3.2e-7075.72Uncharacterized protein OS=Theobroma cacao GN=TCM_043787 PE=4 SV=1[more]
A0A061DW51_THECC5.5e-7075.44DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_003698 PE=4 SV... [more]
BLAST of MELO3C012771 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|595885005|ref|XP_007213082.1|3.8e-7275.72hypothetical protein PRUPE_ppa021229mg [Prunus persica][more]
gi|764568333|ref|XP_011462316.1|2.5e-7174.57PREDICTED: uncharacterized protein LOC105350950 [Fragaria vesca subsp. vesca][more]
gi|595852081|ref|XP_007210241.1|4.2e-7173.99hypothetical protein PRUPE_ppa014973mg, partial [Prunus persica][more]
gi|1009116226|ref|XP_015874658.1|7.1e-7176.88PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107411564, partial [Z... [more]
gi|672163957|ref|XP_008801842.1|2.7e-7075.72PREDICTED: uncharacterized protein LOC103715854 [Phoenix dactylifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012771T1MELO3C012771T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.10.10coord: 58..147
score: 6.9
NoneNo IPR availablePANTHERPTHR10178GAG/POL/ENV POLYPROTEINcoord: 26..171
score: 2.5
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 31..173
score: 6.89

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C012771Watermelon (97103) v2mewmbB219
MELO3C012771Wax gourdmewgoB262
MELO3C012771Cucumber (Gy14) v1cgymeB082
MELO3C012771Cucurbita moschata (Rifu)cmomeB322
MELO3C012771Wild cucumber (PI 183967)cpimeB549
MELO3C012771Cucumber (Chinese Long) v2cumeB543
MELO3C012771Watermelon (Charleston Gray)mewcgB173
MELO3C012771Watermelon (97103) v1mewmB194
MELO3C012771Cucurbita pepo (Zucchini)cpemeB127
MELO3C012771Bottle gourd (USVL1VR-Ls)lsimeB201
MELO3C012771Cucumber (Gy14) v2cgybmeB481
MELO3C012771Silver-seed gourdcarmeB0433
MELO3C012771Cucumber (Chinese Long) v3cucmeB560