MELO3C012582 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C012582
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPhosphonoacetaldehyde hydrolase
Locationchr1 : 19478327 .. 19478760 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGCTCAAACAACTGCTCAAAGGGGTGCTTAATTGTGTTATGATCATGAGGAGCCTTCCAGTAATCTTGCACATTTGATTCCTCAGATGAAGATCACATTGTTATTTCTCGACTTGTACGACATCCTCGAAGAACTTCTGTTGCATCTCCTCGTCGCCCTCTTCCTGGTTCCTCTGATCCCACAGAGAAAGTATTTGCTACCACTGTAGGATTTTCTGCTCCAAATGTTGATGCCTTCATTCCTTATCGGGAATCTAATTATACAAAGAATGTATATGTTCTTTCTATTGATGACTCTACCCCTAGCGTTACTATTGACACCACTGCTCCTGGCATTCTTGACTCTACACTTATGGATAATTCTGCCCCCTTAGTTCATTTGCTCATGCAGAGGGCACTTCTACTTCAACAGAATGGGTATGTCCTCTAG

mRNA sequence

ATGGTTGCTCAAACAACTGCTCAAAGGGATGAAGATCACATTGTTATTTCTCGACTTGTACGACATCCTCGAAGAACTTCTGTTGCATCTCCTCGTCGCCCTCTTCCTGGTTCCTCTGATCCCACAGAGAAAGTATTTGCTACCACTGTAGGATTTTCTGCTCCAAATGTTGATGCCTTCATTCCTTATCGGGAATCTAATTATACAAAGAATGTATATGTTCTTTCTATTGATGACTCTACCCCTAGCGTTACTATTGACACCACTGCTCCTGGCATTCTTGACTCTACACTTATGGATAATTCTGCCCCCTTAGTTCATTTGCTCATGCAGAGGGCACTTCTACTTCAACAGAATGGGTATGTCCTCTAG

Coding sequence (CDS)

ATGGTTGCTCAAACAACTGCTCAAAGGGATGAAGATCACATTGTTATTTCTCGACTTGTACGACATCCTCGAAGAACTTCTGTTGCATCTCCTCGTCGCCCTCTTCCTGGTTCCTCTGATCCCACAGAGAAAGTATTTGCTACCACTGTAGGATTTTCTGCTCCAAATGTTGATGCCTTCATTCCTTATCGGGAATCTAATTATACAAAGAATGTATATGTTCTTTCTATTGATGACTCTACCCCTAGCGTTACTATTGACACCACTGCTCCTGGCATTCTTGACTCTACACTTATGGATAATTCTGCCCCCTTAGTTCATTTGCTCATGCAGAGGGCACTTCTACTTCAACAGAATGGGTATGTCCTCTAG

Protein sequence

MVAQTTAQRDEDHIVISRLVRHPRRTSVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKNVYVLSIDDSTPSVTIDTTAPGILDSTLMDNSAPLVHLLMQRALLLQQNGYVL*
Homology
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BLAST of MELO3C012582 vs. NCBI nr
Match: gi|659069500|ref|XP_008450238.1| (PREDICTED: uncharacterized protein LOC103491899 [Cucumis melo])

HSP 1 Score: 63.2 bits (152), Expect = 3.8e-07
Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 1 

Query: 25  RTSVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKNVYVLSIDDSTPSV 84
           R  +A PRRP  GSSD T+KVFAT+V     NVD F+    S+Y +NV   SIDDSTP  
Sbjct: 2   RAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH- 61

Query: 85  TIDTTAPGILDSTLMDNSAP 105
            ID  A  + + T ++ +AP
Sbjct: 62  -IDDFALNVDNPTSIEITAP 79

The following BLAST results are available for this feature:
BLAST of MELO3C012582 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069500|ref|XP_008450238.1|3.8e-0747.50PREDICTED: uncharacterized protein LOC103491899 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012582T1MELO3C012582T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C012582Cucumber (Chinese Long) v2cumeB533
MELO3C012582Watermelon (Charleston Gray)mewcgB179
MELO3C012582Watermelon (Charleston Gray)mewcgB203
MELO3C012582Watermelon (97103) v1mewmB203
MELO3C012582Cucurbita pepo (Zucchini)cpemeB226
MELO3C012582Bottle gourd (USVL1VR-Ls)lsimeB063
MELO3C012582Bottle gourd (USVL1VR-Ls)lsimeB091
MELO3C012582Cucumber (Gy14) v2cgybmeB471
MELO3C012582Silver-seed gourdcarmeB0537
MELO3C012582Cucumber (Chinese Long) v3cucmeB467
MELO3C012582Cucumber (Chinese Long) v3cucmeB551
MELO3C012582Watermelon (97103) v2mewmbB186
MELO3C012582Watermelon (97103) v2mewmbB227
MELO3C012582Wax gourdmewgoB214
MELO3C012582Cucumber (Gy14) v1cgymeB182
MELO3C012582Cucumber (Gy14) v1cgymeB408
MELO3C012582Cucurbita maxima (Rimu)cmameB464
MELO3C012582Cucurbita moschata (Rifu)cmomeB455
MELO3C012582Wild cucumber (PI 183967)cpimeB456
MELO3C012582Wild cucumber (PI 183967)cpimeB541