MELO3C011691 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C011691
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative reverse transcriptase
Locationchr3 : 9958997 .. 9961093 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGATGTTTTGAGTCACCAAGCAGGTCTTGCTACGGAGACTTTCTGGACAGCAGTTAGATTGGAGAAAGCCTCGCTTCGGCAGAAATCCAGAATACGATGGTTAAAGCTGGGTGATCAGAATACGACTTTTTTCCATCGATCAGTCTGCTCTCGTATGAGTCGTAACACTCTACGTTCTCTAGTTGATTCTGATGGAACCAGGGTGTCTTCACATGATGGGGTGGCTCAGATGGCGGTTAATTATTTTAGTAACAGTTTGGGATCCCAGGAGATTGGCTATAGAGAATTATCCCCAGTCATTGATGATATTGTCCAGTTCCAGTGGTCTGAGGAGTGTTGTCAGGCGTTACAGTTGCCTATTAGTAGGGAGGAAGTTAGGAGGGTCTTATTCTCTATGGATAGTGGAAAGGCCCCGGGTCCTGACGGATTCTTTACAGGTTTCTTTAAAGGTGCCTGGTCTGTGGTTGGGGAAGATTTTTGTGATGCGGTTCTACATTTCTTTGAGACATGTTACCTTCCAGTGGGAGTTAATGCTACTGCTATCACCCTCATTCCTAAACATAATGGGGCGGAGCGTTTGGAGGATTTTCGTCTTATTTCTTGTTGTAATGTGTTATATAAATGCATTTCTAAAATTCTAGCGGATAGACTTCGTGTGTGGCTTCCTTCTTTTATCAGTAGTAATCAGTCTGCTTTTGTTCCTGGGAGGAGTATTATCGAGAACATTCTGCTTTGTCAGGAACTGGTGGGTGGATATCATCTTAACTCCGGTAAGCCTCGTTGTACTTTGAAAGTTGATCATCAAAAAGCATATGACTCTGTTAATTGGGATTTTCTGTTTGGTTTGCTGATTGCTATTGGTACTCCGTTGAAATTTGTGAGTTGGATTAGGGCCTGTGTTACATCCACTATGTTCTCTATTATGATTAATGGCTCGCTGAAGGGGTTTTTTCATGGCAGGAAGGGTGTAAGACAAGGTGATCCTCTATCTCCCTTTCTCTTTGTGATGGTGATGGAAGTTCTGTCTCGTATGTTGAATAAGATCCCTCAGAGTTTTCAATTTCACCATCGTTGTGAGAAGGTTAAGTTAACCTATCTGACCTTCGCTGATGACCTTATGATTTTTTGTGCTGCTGATGAGCCCTCTATCAGATTTATTAGAGAATGTCTTCAGAAGTTTGGTGAGCTTTCAGGTTTGTTCGCAAATCCTAGGAAAAGCTCTATTTTTGTTGCAGGAGTTAATAATGAGAATGCTTCTCATCTGGCTGCTTGTATGGGTTTTGTCCGTGGAAATCTCCCTATTCGTTATCTTGGCCTTCCTCTTTTGGCTGGTCGTTTACGTTCTAATGATTATGCTCCTCTGATTCAGCGTATAACTAGCAGGATTCGTTCTTGGACCGCTCGAGTTCTTTCGTTTGCAGGTAGACTGCAGCTTGTTCGTTTTGTGCTTCGTAGTCTGCAAGTGTATTGGGCTAGTGTGTTTGTTCTTCCTGCGTATGTGCACCATGAGGTGGACAAGATTCTCATATCTTATCTTTGGAGGGGTAAGGAGGAAGGTAGAGGAGGTATTAAAGTGGCTTGGGTGGATGTGTGTCTTCCCTTTGAGGAGAGCGGCCTTGGTATTCGAGATGGCCCTTCTTGGAATATTGCGAGTACTTTGAAGATTTTGTTGCTTATGTTGACTAATTCGGGGTCTCTTTGGGTGGCTTGGGTGAAAGCTTATATACTGAAAGGGAGGTCTTTGTGGGATGTGGATAGTAGAGTGGGTCGATCTTGGCGTCTTCGGGCGATCTTACGTAAGCGAGAGAAGCTGAAGCATCTTGTTTGGATGAAGGTAGGAAATAGTAATAGTTGTAGAGTTTGGCTTGATTCGTGGTTGTTGGGAGATGCCATTTTGGAGCAGGTTGGGGAGAGAGTAATGTATGATGCAGCTAGTTGGAGGGAGGCTAGACTCTCTGACTTTATTGACCCTGATGGAGAATGGCTTTGGCCACGAGTTTCTTTGGATTTAATTGACTTATGGGAGAGGGTTCAGGAGGTCAGTCTGTGTCTTAGTGTTAGTGATAGTTGGGTATGGGTTCCTGGTCGTTAG

mRNA sequence

ATGTCGGATGTTTTGAGTCACCAAGCAGGTCTTGCTACGGAGACTTTCTGGACAGCAGTTAGATTGGAGAAAGCCTCGCTTCGGCAGAAATCCAGAATACGATGGTTAAAGCTGGGTGATCAGAATACGACTTTTTTCCATCGATCAGTCTGCTCTCGTATGAGTCGTAACACTCTACGTTCTCTAGTTGATTCTGATGGAACCAGGGTGTCTTCACATGATGGGGTGGCTCAGATGGCGGTTAATTATTTTAGTAACAGTTTGGGATCCCAGGAGATTGGCTATAGAGAATTATCCCCAGTCATTGATGATATTGTCCAGTTCCAGTGGTCTGAGGAGTGTTGTCAGGCGTTACAGTTGCCTATTAGTAGGGAGGAAGTTAGGAGGGTCTTATTCTCTATGGATAGTGGAAAGGCCCCGGGTCCTGACGGATTCTTTACAGGTTTCTTTAAAGGTGCCTGGTCTGTGGTTGGGGAAGATTTTTGTGATGCGGTTCTACATTTCTTTGAGACATGTTACCTTCCAGTGGGAGTTAATGCTACTGCTATCACCCTCATTCCTAAACATAATGGGGCGGAGCGTTTGGAGGATTTTCGTCTTATTTCTTGTTGTAATGTGTTATATAAATGCATTTCTAAAATTCTAGCGGATAGACTTCGTGTGTGGCTTCCTTCTTTTATCAGTAGTAATCAGTCTGCTTTTGTTCCTGGGAGGAGTATTATCGAGAACATTCTGCTTTGTCAGGAACTGGTGGGTGGATATCATCTTAACTCCGGTAAGCCTCGTTGTACTTTGAAAGTTGATCATCAAAAAGCATATGACTCTGTTAATTGGGATTTTCTGTTTGGTTTGCTGATTGCTATTGGTACTCCGTTGAAATTTGTGAGTTGGATTAGGGCCTGTGTTACATCCACTATGTTCTCTATTATGATTAATGGCTCGCTGAAGGGGTTTTTTCATGGCAGGAAGGGTGTTAAGTTAACCTATCTGACCTTCGCTGATGACCTTATGATTTTTTGTGCTGCTGATGAGCCCTCTATCAGATTTATTAGAGAATGTCTTCAGAAGTTTGGTGAGCTTTCAGGTTTGTTCGCAAATCCTAGGAAAAGCTCTATTTTTGTTGCAGGAGTTAATAATGAGAATGCTTCTCATCTGGCTGCTTGTATGGGTTTTGTCCGTGGAAATCTCCCTATTCGTTATCTTGGCCTTCCTCTTTTGGCTGGTCGTTTACGTTCTAATGATTATGCTCCTCTGATTCAGCGTATAACTAGCAGGATTCGTTCTTGGACCGCTCGAGTTCTTTCGTTTGCAGGTAGACTGCAGCTTGTTCGTTTTGTGCTTCGTAGTCTGCAAGTGTATTGGGCTAGTGTGTTTGTTCTTCCTGCGTATGTGCACCATGAGGTGGACAAGATTCTCATATCTTATCTTTGGAGGGGTAAGGAGGAAGGTAGAGGAGGTATTAAAGTGGCTTGGGTGGATGTGTGTCTTCCCTTTGAGGAGAGCGGCCTTGGTATTCGAGATGGCCCTTCTTGGAATATTGCGAGTACTTTGAAGATTTTGTTGCTTATGTTGACTAATTCGGGGTCTCTTTGGGTGGCTTGGGTGAAAGCTTATATACTGAAAGGGAGGTCTTTGTGGGATGTGGATAGTAGAGTGGGTCGATCTTGGCGTCTTCGGGCGATCTTACGTAAGCGAGAGAAGCTGAAGCATCTTGTTTGGATGAAGGTAGGAAATAGTAATAGTTGTAGAGTTTGGCTTGATTCGTGGTTGTTGGGAGATGCCATTTTGGAGCAGGTTGGGGAGAGAGTAATGTATGATGCAGCTAGTTGGAGGGAGGCTAGACTCTCTGACTTTATTGACCCTGATGGAGAATGGCTTTGGCCACGAGTTTCTTTGGATTTAATTGACTTATGGGAGAGGGTTCAGGAGGTCAGTCTGTGTCTTAGTGTTAGTGATAGTTGGGTATGGGTTCCTGGTCGTTAG

Coding sequence (CDS)

ATGTCGGATGTTTTGAGTCACCAAGCAGGTCTTGCTACGGAGACTTTCTGGACAGCAGTTAGATTGGAGAAAGCCTCGCTTCGGCAGAAATCCAGAATACGATGGTTAAAGCTGGGTGATCAGAATACGACTTTTTTCCATCGATCAGTCTGCTCTCGTATGAGTCGTAACACTCTACGTTCTCTAGTTGATTCTGATGGAACCAGGGTGTCTTCACATGATGGGGTGGCTCAGATGGCGGTTAATTATTTTAGTAACAGTTTGGGATCCCAGGAGATTGGCTATAGAGAATTATCCCCAGTCATTGATGATATTGTCCAGTTCCAGTGGTCTGAGGAGTGTTGTCAGGCGTTACAGTTGCCTATTAGTAGGGAGGAAGTTAGGAGGGTCTTATTCTCTATGGATAGTGGAAAGGCCCCGGGTCCTGACGGATTCTTTACAGGTTTCTTTAAAGGTGCCTGGTCTGTGGTTGGGGAAGATTTTTGTGATGCGGTTCTACATTTCTTTGAGACATGTTACCTTCCAGTGGGAGTTAATGCTACTGCTATCACCCTCATTCCTAAACATAATGGGGCGGAGCGTTTGGAGGATTTTCGTCTTATTTCTTGTTGTAATGTGTTATATAAATGCATTTCTAAAATTCTAGCGGATAGACTTCGTGTGTGGCTTCCTTCTTTTATCAGTAGTAATCAGTCTGCTTTTGTTCCTGGGAGGAGTATTATCGAGAACATTCTGCTTTGTCAGGAACTGGTGGGTGGATATCATCTTAACTCCGGTAAGCCTCGTTGTACTTTGAAAGTTGATCATCAAAAAGCATATGACTCTGTTAATTGGGATTTTCTGTTTGGTTTGCTGATTGCTATTGGTACTCCGTTGAAATTTGTGAGTTGGATTAGGGCCTGTGTTACATCCACTATGTTCTCTATTATGATTAATGGCTCGCTGAAGGGGTTTTTTCATGGCAGGAAGGGTGTTAAGTTAACCTATCTGACCTTCGCTGATGACCTTATGATTTTTTGTGCTGCTGATGAGCCCTCTATCAGATTTATTAGAGAATGTCTTCAGAAGTTTGGTGAGCTTTCAGGTTTGTTCGCAAATCCTAGGAAAAGCTCTATTTTTGTTGCAGGAGTTAATAATGAGAATGCTTCTCATCTGGCTGCTTGTATGGGTTTTGTCCGTGGAAATCTCCCTATTCGTTATCTTGGCCTTCCTCTTTTGGCTGGTCGTTTACGTTCTAATGATTATGCTCCTCTGATTCAGCGTATAACTAGCAGGATTCGTTCTTGGACCGCTCGAGTTCTTTCGTTTGCAGGTAGACTGCAGCTTGTTCGTTTTGTGCTTCGTAGTCTGCAAGTGTATTGGGCTAGTGTGTTTGTTCTTCCTGCGTATGTGCACCATGAGGTGGACAAGATTCTCATATCTTATCTTTGGAGGGGTAAGGAGGAAGGTAGAGGAGGTATTAAAGTGGCTTGGGTGGATGTGTGTCTTCCCTTTGAGGAGAGCGGCCTTGGTATTCGAGATGGCCCTTCTTGGAATATTGCGAGTACTTTGAAGATTTTGTTGCTTATGTTGACTAATTCGGGGTCTCTTTGGGTGGCTTGGGTGAAAGCTTATATACTGAAAGGGAGGTCTTTGTGGGATGTGGATAGTAGAGTGGGTCGATCTTGGCGTCTTCGGGCGATCTTACGTAAGCGAGAGAAGCTGAAGCATCTTGTTTGGATGAAGGTAGGAAATAGTAATAGTTGTAGAGTTTGGCTTGATTCGTGGTTGTTGGGAGATGCCATTTTGGAGCAGGTTGGGGAGAGAGTAATGTATGATGCAGCTAGTTGGAGGGAGGCTAGACTCTCTGACTTTATTGACCCTGATGGAGAATGGCTTTGGCCACGAGTTTCTTTGGATTTAATTGACTTATGGGAGAGGGTTCAGGAGGTCAGTCTGTGTCTTAGTGTTAGTGATAGTTGGGTATGGGTTCCTGGTCGTTAG

Protein sequence

MSDVLSHQAGLATETFWTAVRLEKASLRQKSRIRWLKLGDQNTTFFHRSVCSRMSRNTLRSLVDSDGTRVSSHDGVAQMAVNYFSNSLGSQEIGYRELSPVIDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDFCDAVLHFFETCYLPVGVNATAITLIPKHNGAERLEDFRLISCCNVLYKCISKILADRLRVWLPSFISSNQSAFVPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACVTSTMFSIMINGSLKGFFHGRKGVKLTYLTFADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLAACMGFVRGNLPIRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVRFVLRSLQVYWASVFVLPAYVHHEVDKILISYLWRGKEEGRGGIKVAWVDVCLPFEESGLGIRDGPSWNIASTLKILLLMLTNSGSLWVAWVKAYILKGRSLWDVDSRVGRSWRLRAILRKREKLKHLVWMKVGNSNSCRVWLDSWLLGDAILEQVGERVMYDAASWREARLSDFIDPDGEWLWPRVSLDLIDLWERVQEVSLCLSVSDSWVWVPGR*
Homology
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BLAST of MELO3C011691 vs. Swiss-Prot
Match: YTX2_XENLA (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.3e-25
Identity = 80/303 (26.40%), Postives = 142/303 (46.86%), Query Frame = 1 

Query: 30  KSRIRWLKLGDQNTTFFHRSVCSRMSRNTLRSLVDSDGTRVSSHDGVAQMAVNYFSNSLG 89
           +SR++ L   D+ + FF+     + +R  +  L   DGT +   + +   A +++ N   
Sbjct: 359 RSRMQLLCDMDRGSRFFYALEKKKGNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFS 418

Query: 90  SQEIGYRELSPVIDDIVQFQW------SEECCQALQLPISREEVRRVLFSMDSGKAPGPD 149
                     P+  D  +  W      SE   + L+ PI+ +E+ + L  M   K+PG D
Sbjct: 419 PD--------PISPDACEELWDGLPVVSERRKERLETPITLDELSQALRLMPHNKSPGLD 478

Query: 150 GFFTGFFKGAWSVVGEDFCDAVLHFFETCYLPVGVNATAITLIPKHNGAERLEDFRLISC 209
           G    FF+  W  +G DF   +   F+   LP+      ++L+PK      ++++R +S 
Sbjct: 479 GLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSL 538

Query: 210 CNVLYKCISKILADRLRVWLPSFISSNQSAFVPGRSIIENILLCQELVGGYHLNSGKPRC 269
            +  YK ++K ++ RL+  L   I  +QS  VPGR+I +N+ L ++L+  +   +G    
Sbjct: 539 LSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVFLIRDLL-HFARRTGLSLA 598

Query: 270 TLKVDHQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACVTSTMFSIMINGSLKGFFHGRK 327
            L +D +KA+D V+  +L G L A     +FV +++    S    + IN SL       +
Sbjct: 599 FLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGR 652

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BLAST of MELO3C011691 vs. Swiss-Prot
Match: LORF2_HUMAN (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 4.3e-25
Identity = 114/518 (22.01%), Postives = 212/518 (40.93%), Query Frame = 1 

Query: 18  TAVRLEKASLRQKSRIRWLKLGDQNTTFFHRS----------VCSRMSRNTLRSLVDSDG 77
           T +R E   +  +  ++  K+ +  + FF R           +  +  +N + ++ +  G
Sbjct: 341 TKIRAELKEIETQKTLQ--KINESRSWFFERINKIDRPLARLIKKKREKNQIDTIKNDKG 400

Query: 78  TRVSSHDGVAQMAVNYFSNSLGSQEIGYRELSPVIDDIVQFQWSEECCQALQLPISREEV 137
              +    +      Y+ +   ++     E+   +D     + ++E  ++L  PI+  E+
Sbjct: 401 DITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQEEVESLNRPITGSEI 460

Query: 138 RRVLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDFCDAVLHFFETC----YLPVGVNATAI 197
             ++ S+ + K+PGPDGF   F++       E+    +L  F++      LP      +I
Sbjct: 461 VAIINSLPTKKSPGPDGFTAEFYQR----YKEELVPFLLKLFQSIEKEGILPNSFYEASI 520

Query: 198 TLIPKHN-GAERLEDFRLISCCNVLYKCISKILADRLRVWLPSFISSNQSAFVPGRSIIE 257
            LIPK      + E+FR IS  N+  K ++KILA+R++  +   I  +Q  F+PG     
Sbjct: 521 ILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWF 580

Query: 258 NILLCQELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACV 317
           NI     ++   +    K    + +D +KA+D +   F+   L  +G    ++  IRA  
Sbjct: 581 NIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIY 640

Query: 318 TSTMFSIMING-SLKGF---FHGRKGVKLTYLTFADDLMIFCAA--DEPSIRFIR----- 377
                +I++NG  L+ F      R+G  L+ L F   L +   A   E  I+ I+     
Sbjct: 641 DKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEE 700

Query: 378 -------------------------ECLQKFGELSGLFANPRKSSIFVAGVNNENASHLA 437
                                    + +  F ++SG   N +KS  F+   N +  S + 
Sbjct: 701 VKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYNNNRQTESQIM 760

Query: 438 ACMGFVRGNLPIRYLGLPLL--AGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVR 481
             + F   +  I+YLG+ L      L   +Y PL++ I      W     S+ GR+ +V+
Sbjct: 761 GELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVK 820

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BLAST of MELO3C011691 vs. Swiss-Prot
Match: LIN1_NYCCO (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.9e-21
Identity = 115/519 (22.16%), Postives = 216/519 (41.62%), Query Frame = 1 

Query: 18  TAVRLEKASLRQKSRIRWLKLGDQNTTFFHR------SVCSRMSRNTLRSLVDS---DGT 77
           T +R E   +  K  I+  ++    + FF +       + +   +  ++SL+ S      
Sbjct: 340 TKIRAELNEIENKRIIQ--QINKSKSWFFEKINKIDKPLANLTRKKRVKSLISSIRNGND 399

Query: 78  RVSSHDGVAQMAVNYFSNSLGSQEI-GYRELSPVIDDIVQFQWSEECCQALQLPISREEV 137
            +++     Q  +N +   L S +    +E+   ++     + S++  + L  PIS  E+
Sbjct: 400 EITTDPSEIQKILNEYYKKLYSHKYENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEI 459

Query: 138 RRVLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDFCDAVLHFFETC----YLPVGVNATAI 197
              + ++   K+PGPDGF + F++       E+    +L+ F+       LP       I
Sbjct: 460 ASTIQNLPKKKSPGPDGFTSEFYQ----TFKEELVPILLNLFQNIEKEGILPNTFYEANI 519

Query: 198 TLIPK-HNGAERLEDFRLISCCNVLYKCISKILADRLRVWLPSFISSNQSAFVPGRSIIE 257
           TLIPK      R E++R IS  N+  K ++KIL +R++  +   I  +Q  F+PG     
Sbjct: 520 TLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWF 579

Query: 258 NILLCQELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACV 317
           NI     ++   +    K    L +D +KA+D++   F+   L  IG    F+  I A  
Sbjct: 580 NIRKSINVIQHINKLKNKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIY 639

Query: 318 TSTMFSIMING-SLKGF---FHGRKGVKLTYLTF--ADDLMIFCAADEPSIRFI------ 377
           +    +I++NG  LK F      R+G  L+ L F    +++     +E +I+ I      
Sbjct: 640 SKPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVLAIAIREEKAIKGIHIGSEE 699

Query: 378 -----------------RECLQK-------FGELSGLFANPRKSSIFVAGVNNENASHLA 437
                            R+   K       +  +SG   N  KS  F+   NN+    + 
Sbjct: 700 IKLSLFADDMIVYLENTRDSTTKLLEVIKEYSNVSGYKINTHKSVAFIYTNNNQAEKTVK 759

Query: 438 ACMGFVRGNLPIRYLGLPLL--AGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVR 482
             + F      ++YLG+ L      L   +Y  L + I   +  W     S+ GR+ +V+
Sbjct: 760 DSIPFTVVPKKMKYLGVYLTKDVKDLYKENYETLRKEIAEDVNKWKNIPCSWLGRINIVK 819

[Close]
BLAST of MELO3C011691 vs. Swiss-Prot
Match: RNHX1_ARATH (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-20
Identity = 66/205 (32.20%), Postives = 100/205 (48.78%), Query Frame = 1 

Query: 403 LPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVRFVLRSLQVYWASVFVLPA 462
           +P+L  R+  + +  +++R++SR+  W  + LSFAGRL L + VL S+ V+  S  +LP 
Sbjct: 1   MPVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQ 60

Query: 463 YVHHEVDKILISYLWRGKEEGRGGIKVAWVDVCLPFEESGLGIRDGPSWNIASTLKILLL 522
            + + +D++  ++LW    E +    V W  VC P +E GLG+R   S N A   K+   
Sbjct: 61  SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWR 120

Query: 523 MLTNSGSLWVAWVKAYILKGR---SLWDVDSRVGRS-WRLRAILRKREKLKHLVWMKVGN 582
           +L    SLW   ++     G    S W +      S WR  AI   R+ + H V    G+
Sbjct: 121 LLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAI-GLRDVVSHGVGWIPGD 180

Query: 583 SNSCRVWLDSWLLGDAILE-QVGER 603
               R W D W+ G  +LE   GER
Sbjct: 181 GQQIRFWTDRWVSGKPLLELDNGER 204

[Close]
BLAST of MELO3C011691 vs. Swiss-Prot
Match: LORF2_MOUSE (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-14
Identity = 58/201 (28.86%), Postives = 96/201 (47.76%), Query Frame = 1 

Query: 118 LQLPISREEVRRVLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDFCDAVLHFFETCY---- 177
           L  PIS +E+  V+ S+ + K+PGPDGF   F++       ED    +   F        
Sbjct: 456 LNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQ----TFKEDLIPILHKLFHKIEVEGT 515

Query: 178 LPVGVNATAITLIPK-HNGAERLEDFRLISCCNVLYKCISKILADRLRVWLPSFISSNQS 237
           LP       ITLIPK      ++E+FR IS  N+  K ++KILA+R++  + + I  +Q 
Sbjct: 516 LPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQV 575

Query: 238 AFVPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFLFGLLIAIGTPL 297
            F+PG     NI     ++   +    K    + +D +KA+D +   F+  +L   G   
Sbjct: 576 GFIPGMQGWFNIRKSINVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQG 635

Query: 298 KFVSWIRACVTSTMFSIMING 314
            +++ I+A  +  + +I +NG
Sbjct: 636 PYLNMIKAIYSKPVANIKVNG 652

[Close]
BLAST of MELO3C011691 vs. TrEMBL
Match: A0A0D3AY02_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.9e-112
Identity = 226/639 (35.37%), Postives = 352/639 (55.09%), Query Frame = 1 

Query: 12  ATETFWTAVRLEKASLRQKSRIRWLKLGDQNTTFFHRSVCSRMSRNTLRSLVDSDGTRVS 71
           A E +     +E+   +QKS++ WL++GD+N  FFH +   +   N +R +V  DG+  +
Sbjct: 340 ALERWQKLADIEEEVFKQKSKMHWLEVGDRNNKFFHNAAKIKEVMNAIREVVCPDGSIAT 399

Query: 72  SHDGVAQMAVNYFSNSLGSQEIGYRELSPV--IDDIVQFQWSEECCQALQLPISREEVRR 131
           + + + + A  +FS  L  + + Y E+  V  + D++QF+ SEE C  L   +S EEV+ 
Sbjct: 400 TEEDIKKEAERFFSELLTHRPLDY-EIPSVESLQDLLQFRCSEEDCGNLIRDVSAEEVKE 459

Query: 132 VLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDFCDAVLHFFETCYLPVGVNATAITLIPKH 191
           V+F M S K+PGPDG+   FFK AW ++G D   AV  FF   +LP G+N+T + LIPK 
Sbjct: 460 VIFKMPSNKSPGPDGYTVEFFKAAWQIIGNDVVVAVQSFFIKGFLPKGINSTILALIPKK 519

Query: 192 NGAERLEDFRLISCCNVLYKCISKILADRLRVWLPSFISSNQSAFVPGRSIIENILLCQE 251
           + A+ ++D+R ISCCNVLYK ISK+LA RL+  +P+FISSNQSAFV  R ++EN+LL  E
Sbjct: 520 DIAKEMKDYRPISCCNVLYKVISKLLATRLKDIMPTFISSNQSAFVKDRLLMENLLLATE 579

Query: 252 LVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACVTSTMFSI 311
           LV  YH +   PRC +K+D  KA+DSV   FL   L A+G P K++ WI  CV++  FS+
Sbjct: 580 LVKDYHKSEISPRCAMKIDISKAFDSVQRHFLLATLEALGFPAKYIHWINLCVSTASFSV 639

Query: 312 MINGSLKGFFHGRKGVKLTYLTFADDLMIFC----------AADEPSIRFIRECLQK--- 371
            +NG L G+F+  +G++      +  L + C          AA +  + +   C      
Sbjct: 640 QVNGELAGYFNSARGLR-QGCALSPSLFVICMNVLSKLLDKAAADRLVGYHPRCRNALLT 699

Query: 372 ---FGELSGLFANPR-------------------------KSSIFVAGVNNENASHLAAC 431
              F +   +F + +                         KS++++AG++ +N   +   
Sbjct: 700 HLCFADDIMVFTDGQKRSVEGVLKVFEKFEKLSGLKISLEKSTLYMAGISEDNRKAILEN 759

Query: 432 MGFVRGNLPIRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVRFVLR 491
             F  G LP+RYLGLPLL  ++   DY PL++++ +++ +W  R LS+AGRLQL++ V+ 
Sbjct: 760 FPFEAGQLPVRYLGLPLLTKKMTVADYLPLMEKVRTKMCNWNGRFLSYAGRLQLIKSVIM 819

Query: 492 SLQVYWASVFVLPAYVHHEVDKILISYLWRGKEEGRGGIKVAWVDVCLPFEESGLGIRDG 551
           SL  +W S F +P      ++K+   +LW G E      KV W +VC   EE GLG+R  
Sbjct: 820 SLTNFWLSAFRIPRQCLSGIEKLCAGFLWSGPELNMKKSKVGWAEVCKKKEEGGLGLRVL 879

Query: 552 PSWNIASTLKILLLMLTNSGSLWVAWVKAYILKGRSLWDV-DSRVGRSWRLRAILRKREK 607
              N  S LK++  +L+   SLWV WV+ Y+++  S W + ++    SW  + IL+ R+ 
Sbjct: 880 TEVNEVSCLKLVWRLLSGQNSLWVKWVQQYLIRRGSFWSIKETTTVGSWMWKKILKTRDS 939

[Close]
BLAST of MELO3C011691 vs. TrEMBL
Match: O82216_ARATH (Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=At2g23880 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.5e-106
Identity = 224/624 (35.90%), Postives = 345/624 (55.29%), Query Frame = 1 

Query: 38  LGDQNTTFFHRSVCSRMSRNTLRSLVDSDGTRVSSHDGVAQMAVNYFSNSLGSQEIGYRE 97
           +GD+N   FHR++ +R + N++R +V  DG  V+S   +   AVNYF + L +    Y  
Sbjct: 89  VGDRNNKTFHRAITTREAVNSIREIVTRDGLVVTSQQDIQTEAVNYFQDFLQTIPADYEG 148

Query: 98  LS-PVIDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFFTGFFKGAWSV 157
           +    +++++ F+ SE+  + L   ++ EE+++V+FSM   K+PGPDG+ + F+K +W +
Sbjct: 149 MCVEELENLLPFRCSEDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEI 208

Query: 158 VGEDFCDAVLHFFETCYLPVGVNATAITLIPKHNGAERLEDFRLISCCNVLYKCISKILA 217
           +G++   A+  FF   +LP GVN+T + LIPK   A  ++D+R ISCCNVLYK ISKILA
Sbjct: 209 IGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILA 268

Query: 218 DRLRVWLPSFISSNQSAFVPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDHQKAYDSV 277
           +RL+  LP FI  NQSAFV  R +IEN+LL  ELV  YH +S   RC +K+D  KA+DS+
Sbjct: 269 NRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSL 328

Query: 278 NWDFLFGLLIAIGTPLKFVSWIRACVTSTMFSIMINGSLKGFFHG----RKGVKLTYLTF 337
            W FL  +L A+  P +F+ WI  C+++  FSI +NG L G+F      R+G  L+   F
Sbjct: 329 QWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLF 388

Query: 338 ADDL-----MIFCAADEPSIRFIRECLQKFGELSGLFANP-------------------- 397
              +     M+  AA      +   C +  G     FA+                     
Sbjct: 389 VISMDVLSRMLDKAAGAREFGYHPRC-KTLGLTHLCFADDLMILTDGKIRSVDGIVKVLN 448

Query: 398 ------------RKSSIFVAGVNNENASHLAACMGFVRGNLPIRYLGLPLLAGRLRSNDY 457
                        K+++++AGV++ +   +++   F  G LP+RYLGLPL+  RL ++DY
Sbjct: 449 QFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDY 508

Query: 458 APLIQRITSRIRSWTARVLSFAGRLQLVRFVLRSLQVYWASVFVLPAYVHHEVDKILISY 517
           +PLI +I  RI  WT+R LSFAGRL L+  VL S+  +W + F LP    +E+++I  + 
Sbjct: 509 SPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSAL 568

Query: 518 LWRGKEEGRGGIKVAWVDVCLPFEESGLGIRDGPSWNIASTLKILLLMLTNSGSLWVAWV 577
           LW G E      KV+W ++C P +E GLG++     N  S+LK++  +L+   SLWV W 
Sbjct: 569 LWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWT 628

Query: 578 KAYILKGRSLWDV--DSRVGRSWRLRAILRKREKLKHLVWMKVGNSNSCRVWLDSWLLGD 618
           +  +LK  S W +   S +G SW  R +L+ RE  K    ++V N  +   W D+W    
Sbjct: 629 RMNLLKKESFWSIGTHSTLG-SWIWRRLLKHREVAKSFCKIEVNNGVNTSFWFDNWSEKG 688

[Close]
BLAST of MELO3C011691 vs. TrEMBL
Match: Q9FZG5_ARATH (T2E6.4 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.4e-101
Identity = 201/529 (38.00%), Postives = 302/529 (57.09%), Query Frame = 1 

Query: 102 IDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDF 161
           + +++ F+ S      L   ++ EE ++VLF+M S K PGPDG+ + FFK  WS+ G+DF
Sbjct: 6   LQNLMSFRCSATDQDMLTREVTSEENQKVLFAMPSNKFPGPDGYTSEFFKATWSITGQDF 65

Query: 162 CDAVLHFFETCYLPVGVNATAITLIPKHNGAERLEDFRLISCCNVLYKCISKILADRLRV 221
             A+  FF   +LP G+NAT + LIPK + A  + D+R ISCCNV+YK ISKI+A+RL+V
Sbjct: 66  IAAIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKV 125

Query: 222 WLPSFISSNQSAFVPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFL 281
            LP+FI  NQSAFV  R +IEN+LL  ELV  YH +S  PRC +K+D  KA+DSV W FL
Sbjct: 126 MLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFL 185

Query: 282 FGLLIAIGTPLKFVSWIRACVTSTMFSIMINGSLKGFFHGRKGVK-------------LT 341
              L A+  P  F  WI+ C+++  FS+ +NG L GFF  ++G++             + 
Sbjct: 186 LNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMN 245

Query: 342 YLTFADD------------------LMIFCAADEPSI------RFIRECLQKFGEL---S 401
            L+   D                  L   C AD+  +      R +   +  F E    S
Sbjct: 246 VLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKS 305

Query: 402 GLFANPRKSSIFVAGVNNENASHLAACMGFVRGNLPIRYLGLPLLAGRLRSNDYAPLIQR 461
           GL  +  KS++++AGV+  N +++ +   F  G LP+RYLGLPLL  ++ + DY+PL+ +
Sbjct: 306 GLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDK 365

Query: 462 ITSRIRSWTARVLSFAGRLQLVRFVLRSLQVYWASVFVLPAYVHHEVDKILISYLWRGKE 521
           + S+I SWTAR LS+AGRL L+  V+ SL  +W S + LPA    E++K+  ++LW G E
Sbjct: 366 VRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPE 425

Query: 522 EGRGGIKVAWVDVCLPFEESGLGIRDGPSWNIASTLKILLLMLTNSGSLWVAWVKAYILK 581
                 K+ W  +C   +E GLGI+     N  S LK++  +++   SLWV WV  YI++
Sbjct: 426 LNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIR 485

Query: 582 GRSLWDVDSRVG-RSWRLRAILRKREKLKHLVWMKVGNSNSCRVWLDSW 590
             S W  + R    SW  + +L+ R+  K +  +++ + +S   W D+W
Sbjct: 486 KGSFWSANDRSSLGSWMWKKLLKYRDVAKSMCKVEIKSGSSTSFWYDNW 534

[Close]
BLAST of MELO3C011691 vs. TrEMBL
Match: O64612_ARATH (Putative reverse transcriptase OS=Arabidopsis thaliana GN=At2g18820 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.7e-100
Identity = 201/526 (38.21%), Postives = 299/526 (56.84%), Query Frame = 1 

Query: 46   FHRSVCSRMSRNTLRSLVDSDGTRVSSHDGVAQMAVNYFSNSLGSQEIGYRELS-PVIDD 105
            F R    R   N +  ++D  GTR  + D +   AV +FS+ L SQ   +  +S   +  
Sbjct: 642  FERWEKERHLLNAIHEVMDPQGTRPPNQDDIKIEAVRFFSDLLSSQPSDFTGISVDELKG 701

Query: 106  IVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDFCDA 165
            I+Q+++S      L   I+  EV +V FS+   K+PGPDG+   FF+  WSV+G++   A
Sbjct: 702  ILQYRYSLHEQNLLVAEITEAEVMKVFFSIPLNKSPGPDGYTVEFFRETWSVIGQEVTMA 761

Query: 166  VLHFFETCYLPVGVNATAITLIPKHNGAERLEDFRLISCCNVLYKCISKILADRLRVWLP 225
            +  FF   +LP G+N+T + LIPK   A+ ++D+R ISCCNVLYK ISK+LA+RL+  LP
Sbjct: 762  IKSFFTYGFLPKGLNSTILALIPKRTYAKEMKDYRPISCCNVLYKAISKLLANRLKCLLP 821

Query: 226  SFISSNQSAFVPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFLFGL 285
             FI+ NQSAF+  R ++EN+LL  ELV  YH +   PRC +K+D  KA+DSV W FL   
Sbjct: 822  EFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKAFDSVQWPFLLNT 881

Query: 286  LIAIGTPLKFVSWIRACVTSTMFSIMINGSLKGF-------------------------- 345
            L A+  P KF+ WI  C+++  FS+ +NG  +G                           
Sbjct: 882  LAALDIPEKFIHWINLCISTASFSVQVNGLRQGCSLSPYLFVICMNVLSAMLDKGAVEKR 941

Query: 346  --FHGR-KGVKLTYLTFADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVA 405
              +H R + + LT+L FADD+M+F A    S+  +    + F   SGL  +  KS++F+A
Sbjct: 942  FGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMA 1001

Query: 406  GVNNENASHLAACMGFVRGNLPIRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLS 465
             +++E  + + A   F  G+LP+RYLGLPL+  R+   D  PL+++I SRI SW  R LS
Sbjct: 1002 SISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLS 1061

Query: 466  FAGRLQLVRFVLRSLQVYWASVFVLPAYVHHEVDKILISYLWRGKEEGRGGIKVAWVDVC 525
            +AGRLQL+  V+ SL  +W S F LP     E+++I  ++LW G +      KVAW DVC
Sbjct: 1062 YAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVC 1121

Query: 526  LPFEESGLGIRDGPSWNIASTLKILLLMLTNSGSLWVAWVKAYILK 542
             P  E GLG+R     N     K++  +++   SLWV W++  +++
Sbjct: 1122 KPKSEGGLGLRSLVDANKICCFKLIWRLVSAKHSLWVNWIQNNLIR 1167

[Close]
BLAST of MELO3C011691 vs. TrEMBL
Match: Q9ZQQ6_ARATH (Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=At2g14430 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.4e-93
Identity = 198/610 (32.46%), Postives = 323/610 (52.95%), Query Frame = 1 

Query: 22   LEKASLRQKSRIRWLKLGDQNTTFFHRSVCSRMSRNTLRSLVDSDGTRVSSHDGVAQMAV 81
            LE+  ++QKS++ W+K+GD+N ++FH++   R  +N++R +   +G  + + + +   A 
Sbjct: 524  LEEGYMKQKSKLHWMKVGDRNNSYFHKAAQVRRMQNSIREIQGPNGVVLQTSEEIKGEAE 583

Query: 82   NYFSNSLGSQEIGYRELS-PVIDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAP 141
             +F   L  Q   ++ ++   + +++ F+ S      L   ++ EE+++VLF+M S K+P
Sbjct: 584  RFFQEFLNHQPSDFQGMTVEELQNLMSFRCSATDQDMLTREVTSEEIQKVLFAMPSNKSP 643

Query: 142  GPDGFFTGFFKGAWSVVGEDFCDAVLHFFETCYLPVGVNATAITLIPKHNGAERLEDFRL 201
            GPDG                            Y  +     A+  IPK + A  + D+R 
Sbjct: 644  GPDG----------------------------YTRLNATILAL--IPKKDEATLMRDYRP 703

Query: 202  ISCCNVLYKCISKILADRLRVWLPSFISSNQSAFVPGRSIIENILLCQELVGGYHLNSGK 261
            ISCCNV+YK ISKI+A+RL+V LP+FI  NQSAFV  R ++EN+LL  ELV  YH +S  
Sbjct: 704  ISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLMENVLLATELVKDYHKDSIS 763

Query: 262  PRCTLKVDHQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACVTSTMFSIMINGSLKGFFH 321
            PRC +K+D  KA+DSV W FL   L A+  P KF  WI+ C+++  FS+ +N    GFF 
Sbjct: 764  PRCAMKIDISKAFDSVQWQFLLNTLEALKFPEKFRHWIKLCISTATFSVQVNSEQAGFFG 823

Query: 322  GRKGVK-------------LTYLTFADD------------------LMIFCAADEPSI-- 381
             ++G++             +  L+   D                  L   C AD+  +  
Sbjct: 824  SKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFI 883

Query: 382  ----RFIRECLQKFGELSGLFA---NPRKSSIFVAGVNNENASHLAACMGFVRGNLPIRY 441
                R +   +  F + +G      +  KS++++A V+  N +++ +   F  G LP+RY
Sbjct: 884  DGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRY 943

Query: 442  LGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVRFVLRSLQVYWASVFVL 501
            LG PLL  ++ + DY+PL+ ++ S+I SWTAR LS+AGRL L+  V+ SL  +W S + L
Sbjct: 944  LGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRL 1003

Query: 502  PAYVHHEVDKILISYLWRGKEEGRGGIKVAWVDVCLPFEESGLGIRDGPSWNIASTLKIL 561
            PA    E++K+  ++LW G E      K+ W  +C   +E GLGI+     N  S LK++
Sbjct: 1004 PAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLI 1063

Query: 562  LLMLTNSGSLWVAWVKAYILKGRSLWDVDSRVG-RSWRLRAILRKREKLKHLVWMKVGNS 590
              +++   SLWV WV  YI++  S W  + R    SW  + +L  R+  K +  +++ + 
Sbjct: 1064 WRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLNYRDVAKSMCKVEIKSG 1103

[Close]
BLAST of MELO3C011691 vs. TAIR10
Match: AT3G24255.1 (AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein)

HSP 1 Score: 143.3 bits (360), Expect = 5.4e-34
Identity = 86/246 (34.96%), Postives = 121/246 (49.19%), Query Frame = 1 

Query: 374 VAGVNNENASHLAACMGFVRGNLPIRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARV 433
           +AGV + + + +     F  G LP+RYLGLPLL  ++ ++DY PL+++I  RI  WTAR 
Sbjct: 1   MAGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARH 60

Query: 434 LSFAGRLQLVRFVLRSLQVYWASVFVLPAYVHHEVDKILISYLWRGKEEGRGGIKVAWVD 493
           LSFAGRLQL+  V+ SL  +W S F LP+    E+D I  S+LW G E      KVAW D
Sbjct: 61  LSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSD 120

Query: 494 VCLPFEESGLGIRDGPSWNIASTLKILLLMLTNSGSLWVAWVKAYILKGRSLWDVDSRVG 553
           VC P +E GLGIR               L   N GS W        + G      ++ +G
Sbjct: 121 VCTPKDEGGLGIRS--------------LKEANKGSFW-------SISG------NTTLG 180

Query: 554 RSWRLRAILRKREKLKHLVWMKVGNSNSCRVWLDSWLLGDAILEQVGERVMYDAASWREA 613
            SW  + IL+ R      V   + N ++   W D+W     +++  G R   D      A
Sbjct: 181 -SWMWKKILKHRALASGFVKHDIHNGSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHA 218

Query: 614 RLSDFI 620
            +++ +
Sbjct: 241 SVAEAV 218

[Close]
BLAST of MELO3C011691 vs. TAIR10
Match: AT1G43760.1 (AT1G43760.1 DNAse I-like superfamily protein)

HSP 1 Score: 132.9 bits (333), Expect = 7.3e-31
Identity = 76/186 (40.86%), Postives = 105/186 (56.45%), Query Frame = 1 

Query: 28  RQKSRIRWLKLGDQNTTFFHRSVCSRMSRNTLRSLVDSDGTRVSSHDGVAQMAVNYFSNS 87
           RQKSRI+WL+ GD NT FFH+ + +  ++N ++ L   D  RV +   V +M V Y+++ 
Sbjct: 436 RQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHL 495

Query: 88  LGSQ-EIGYRELSPVIDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFF 147
           LGS  +I   +    I DI  F+ ++     L    S +E+   +F+M   KAPGPD F 
Sbjct: 496 LGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFT 555

Query: 148 TGFFKGAWSVVGEDFCDAVLHFFETCYLPVGVNATAITLIPKHNGAERLEDFRLISCCNV 207
             FF  +W VV +    AV  FF T +L    NATAITLIPK  G ++L  FR +SCC V
Sbjct: 556 AEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTV 615

Query: 208 LYKCIS 213
           +YK I+
Sbjct: 616 VYKIIT 621

[Close]
BLAST of MELO3C011691 vs. TAIR10
Match: AT3G25720.1 (AT3G25720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein)

HSP 1 Score: 70.9 bits (172), Expect = 3.4e-12
Identity = 36/115 (31.30%), Postives = 52/115 (45.22%), Query Frame = 1 

Query: 492 VDVCLPFEESGLGIRDGPSWNIASTLKILLLMLTNSGSLWVAWVKAYILKG------RSL 551
           + VCLP  E GLG+R    WN    LK++  + +  GSLWV W + + L+G         
Sbjct: 16  IAVCLPKAEGGLGLRWFSEWNTTLNLKLVWRLFSGGGSLWVDWHRYHHLQGLGDASVSKF 75

Query: 552 WDVDSRVGRSWRLRAILRKREKLKHLVWMKVGNSNSCRVWLDSWLLGDAILEQVG 601
           W     V  SW  + +LR R   +  +   +GN  + R W D+W     +L  +G
Sbjct: 76  WTSQELVSDSWNWKCLLRLRPLAERFLRCNIGNGLTARFWTDNWTPFGPLLIHIG 130

[Close]
BLAST of MELO3C011691 vs. TAIR10
Match: AT4G20520.1 (AT4G20520.1 RNA binding;RNA-directed DNA polymerases)

HSP 1 Score: 55.5 bits (132), Expect = 1.5e-07
Identity = 29/78 (37.18%), Postives = 42/78 (53.85%), Query Frame = 1 

Query: 215 LADRLRVWLPSFISSNQSAFVPGRSIIENILLCQELVGGYHLNSG-KPRCTLKVDHQKAY 274
           + +RL+  + + I   Q++F+PGR   +NI+  QE V       G K    LK+D +KAY
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60

Query: 275 DSVNWDFLFGLLIAIGTP 292
           D + WD+L   LI+ G P
Sbjct: 61  DRIRWDYLEDTLISAGFP 78

[Close]
BLAST of MELO3C011691 vs. NCBI nr
Match: gi|659102432|ref|XP_008452126.1| (PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo])

HSP 1 Score: 816.2 bits (2107), Expect = 4.1e-233
Identity = 446/645 (69.15%), Postives = 475/645 (73.64%), Query Frame = 1 

Query: 1   MSDVLSHQAGLATETFWTAVRLEKASLRQKSRIRWLKLGDQNTTFFHRSVCSRMSRNTLR 60
           MSDVLS QA LATETFWTAVRLEK                            R  RN L 
Sbjct: 233 MSDVLSRQASLATETFWTAVRLEKP---------------------------RFGRN-LE 292

Query: 61  SLVDSDGTRVSSHDGVAQMAVNYFSNSLGSQEIGYRELSPVIDDIVQFQWSEECCQALQL 120
            +VDS  +RVSSHDGVAQMAVNYFSNSLGSQEIGYREL+P+IDDIVQFQWSEECCQALQ+
Sbjct: 293 FVVDSVCSRVSSHDGVAQMAVNYFSNSLGSQEIGYRELTPIIDDIVQFQWSEECCQALQV 352

Query: 121 PISREEVRRVLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDFCDAVLHFFETCYLPVGVNA 180
           PISREEVRRVLFSMDSGKAPGPDGF  GFFKGAWSV+GEDFCDAVLHFFET YLPVGVNA
Sbjct: 353 PISREEVRRVLFSMDSGKAPGPDGFSVGFFKGAWSVIGEDFCDAVLHFFETYYLPVGVNA 412

Query: 181 TAITLIPKHNGAERLEDFRLISCCNVLYKCISKILADRLRVWLPSFISSNQSAFVPGRSI 240
           TAITLIPKHNGAERLEDFR ISCCNVLYKCISKILADRLRVWLPSFISSNQSAF+ GRSI
Sbjct: 413 TAITLIPKHNGAERLEDFRPISCCNVLYKCISKILADRLRVWLPSFISSNQSAFILGRSI 472

Query: 241 IENILLCQELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRA 300
           IENILLCQELVGGYHLNSGKPRCTLKVD QKAYDSVNWDFLFGL I+I TPLK       
Sbjct: 473 IENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFLFGLQISISTPLK------- 532

Query: 301 CVTSTMFSIMINGSLKGFFHGRKGVKLTYLTFADDLMIFCAADEPSIRFIRECLQKFGEL 360
                          KG   G       ++   + L         S +F   C ++FGEL
Sbjct: 533 ---------------KGVRQGDPLSLFLFVMVMEVLSRMLNKIPQSFQFHHRCEKRFGEL 592

Query: 361 SGLFANPRKSSIFVAGVNNENASHLAACMGFVRGNLPIRYLGLPLLAGRLRSNDYAPLIQ 420
           SGLFANPRKSSIF+AGVNNENAS LAACMGFVRGNLP+RYLGLPLL GRLRSND  PLIQ
Sbjct: 593 SGLFANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCVPLIQ 652

Query: 421 RITSRIRSWTARVLSFAGRLQLVRFVLRSLQVYWASVFVLPAYVHHEVDKILISYLWRGK 480
           RITSRIRS +ARVLSFAGRLQLV  VL SLQVYWA VFVLPAYVH+              
Sbjct: 653 RITSRIRSRSARVLSFAGRLQLVCSVLCSLQVYWAIVFVLPAYVHN-------------- 712

Query: 481 EEGRGGIK--VAWVDVCLPFEESGLGIRDGPSWNIASTLK-ILLLMLTNSGSLWVAWVKA 540
            EG  GI+   AW                      ASTLK +  LMLTNSGSLWVAWV+A
Sbjct: 713 -EGGLGIRDGTAW--------------------KFASTLKIL-WLMLTNSGSLWVAWVEA 772

Query: 541 YILKGRSLWDVDSRVGRSWRLRAILRKREKLKHLVWMKVGNSNSCRVWLDSWLLGDAILE 600
           Y+LKGRSLWDVDSRVGRSW LRAILRK+EKLK  V MKVGN N CRVWLD WL   AILE
Sbjct: 773 YVLKGRSLWDVDSRVGRSWCLRAILRKQEKLKQHVRMKVGNGNRCRVWLDPWLQRGAILE 791

Query: 601 QVGERVMYDAASWREARLSDFIDPDGEWLWPRVSLDLIDLWERVQ 643
           +VGERV+YDAAS REA LS+FI PDGEWLWPR    +   WE ++
Sbjct: 833 RVGERVLYDAASRREASLSNFIGPDGEWLWPRGGFSIASAWEAIR 791

[Close]
BLAST of MELO3C011691 vs. NCBI nr
Match: gi|659121154|ref|XP_008460525.1| (PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein At1g65750 [Cucumis melo])

HSP 1 Score: 631.7 bits (1628), Expect = 1.4e-177
Identity = 324/393 (82.44%), Postives = 334/393 (84.99%), Query Frame = 1 

Query: 306 MFSIMINGSLKGFFHGRKGVK----LTYLTF----------------------------- 365
           MFSIMINGSL+GFFHGRKGV+    L+   F                             
Sbjct: 1   MFSIMINGSLEGFFHGRKGVRQGDPLSTFLFVMVMEVLSRMLNKIPQSFHFHHRCEKVKL 60

Query: 366 -----ADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLAA 425
                ADDLMIFCAA+EPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLA 
Sbjct: 61  THLTFADDLMIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLAT 120

Query: 426 CMGFVRGNLPIRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVRFVL 485
           CMGFVRGNL +RYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLV  VL
Sbjct: 121 CMGFVRGNLSVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVL 180

Query: 486 RSLQVYWASVFVLPAYVHHEVDKILISYLWRGKEEGRGGIKVAWVDVCLPFEESGLGIRD 545
           RS QVYWASVFVLPAYVH+EVDKIL SYLWRGKEEGRGGIKVAWVDVCLPFEE GLGIRD
Sbjct: 181 RSFQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRD 240

Query: 546 GPSWNIASTLKILLLMLTNSGSLWVAWVKAYILKGRSLWDVDSRVGRSWRLRAILRKREK 605
           GPSWNIASTLKIL LMLTNSGSLWVAWV+AYILKGRSLWDVDSRVG+SW LRAILRKREK
Sbjct: 241 GPSWNIASTLKILWLMLTNSGSLWVAWVEAYILKGRSLWDVDSRVGKSWCLRAILRKREK 300

Query: 606 LKHLVWMKVGNSNSCRVWLDSWLLGDAILEQVGERVMYDAASWREARLSDFIDPDGEWLW 661
           LKHLV MKVGN NS RVWLD WL   AILEQVGERVMYDAAS R+ARLSDFIDPDGEWLW
Sbjct: 301 LKHLVRMKVGNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRRKARLSDFIDPDGEWLW 360

[Close]
BLAST of MELO3C011691 vs. NCBI nr
Match: gi|659126450|ref|XP_008463188.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo])

HSP 1 Score: 531.6 bits (1368), Expect = 2.0e-147
Identity = 279/339 (82.30%), Postives = 292/339 (86.14%), Query Frame = 1 

Query: 268 DHQKAYDSVNWDFLFGLLIAIGTPLKF-------VSWIRACVTSTMFSIMINGSLKGF-F 327
           D QKAYDSVNWDFLFGLLIAIGT LK        +S     +   + S M+N   + F F
Sbjct: 48  DLQKAYDSVNWDFLFGLLIAIGTLLKKGVRQGDPLSPFLFVMVMEVLSRMLNKIPQSFQF 107

Query: 328 HGR-KGVKLTYLTFADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVN 387
           H R + VKLT+LTFADDLMIFCAADE SIRFIR+CLQKFGELSGLFANPRKSSIFVAGVN
Sbjct: 108 HHRCEKVKLTHLTFADDLMIFCAADELSIRFIRDCLQKFGELSGLFANPRKSSIFVAGVN 167

Query: 388 NENASHLAACMGFVRGNLPIRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAG 447
           NENASHLAACMGFVRGNL +RYLGLPLL GRL SND APLIQRITS+IRSWTARVLSFAG
Sbjct: 168 NENASHLAACMGFVRGNLSVRYLGLPLLTGRLCSNDCAPLIQRITSQIRSWTARVLSFAG 227

Query: 448 RLQLVRFVLRSLQVYWASVFVLPAYVHHEVDKILISYLWRGKEEGRGGIKVAWVDVCLPF 507
           R+QLV  VLRSLQVYWASVFVLPAYVH+EVDKIL SYLWRGKEEGRGGIKVAWVDVCLPF
Sbjct: 228 RMQLVCSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDVCLPF 287

Query: 508 EESGLGIRDGPSWNIASTLKILLLMLTNSGSLWVAWVKAYILKGRSLWDVDSRVGRSWRL 567
           EE GLGIRDGPSWNIASTLKIL LMLTNSGSLWVAWV+AYILK RSLWDVDSRVGRSW L
Sbjct: 288 EEGGLGIRDGPSWNIASTLKILWLMLTNSGSLWVAWVEAYILKRRSLWDVDSRVGRSWCL 347

Query: 568 RAILRKREKLKHLVWMKVGNSNSCRVWLDSWLLGDAILE 598
           RAILRKREKLKH V MKVGN N CRVWLD WL G AILE
Sbjct: 348 RAILRKREKLKHHVRMKVGNGNRCRVWLDPWLQGGAILE 386

[Close]
BLAST of MELO3C011691 vs. NCBI nr
Match: gi|659126450|ref|XP_008463188.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo])

HSP 1 Score: 74.3 bits (181), Expect = 8.8e-10
Identity = 42/70 (60.00%), Postives = 42/70 (60.00%), Query Frame = 1 

Query: 134 MDSGKAPGPDGFFTGFFKGAWSVVGEDFCDAVLHFFETCYLPVGVNATAITLIPKHNGAE 193
           MDSGKAPGPDGF  GFFK                        V VNATAITLIPKHNGAE
Sbjct: 1   MDSGKAPGPDGFSLGFFK------------------------VWVNATAITLIPKHNGAE 46

Query: 194 RLEDFRLISC 204
           RLEDFR ISC
Sbjct: 61  RLEDFRPISC 46


HSP 2 Score: 462.2 bits (1188), Expect = 1.5e-126
Identity = 253/714 (35.43%), Postives = 386/714 (54.06%), Query Frame = 1 

Query: 8    QAGLATETFWTAVRLEKASLRQKSRIRWLKLGDQNTTFFHRSVCSRMSRNTLRSLVDSDG 67
            +  +A E +   V LE+  L+Q++++ WL LGD N   FH ++  R ++N++R +  S+G
Sbjct: 637  EEAVAYERWLHVVSLEEDFLKQRAKLHWLDLGDHNNKAFHNAIRVRKAQNSIREIRCSNG 696

Query: 68   TRVSSHDGVAQMAVNYFSNSLGSQEIGY-RELSPVIDDIVQFQWSEECCQALQLPISREE 127
              V+    + + A  +FS  L      Y    S  + ++++F+ SEE C  L+  ++ EE
Sbjct: 697  CSVTQQKDIKKEAARFFSEFLNKIPDNYIGATSKELKEMLKFRCSEENCSLLEAQVTAEE 756

Query: 128  VRRVLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDFCDAVLHFFETCYLPVGVNATAITLI 187
            +R+V+F+M + K+PGPDGF + FFK  W +V +DF  AV   F   +LP GVN+T + L+
Sbjct: 757  IRKVVFAMPANKSPGPDGFPSEFFKTTWPIVAQDFIIAVQSVFRFGFLPKGVNSTILALV 816

Query: 188  PKHNGAERLEDFRLISCCNVLYKCISKILADRLRVWLPSFISSNQSAFVPGRSIIENILL 247
            PK   +  + DFR I+CCNVLYK +SK LA+R +V LP  IS  QSAFV GR ++EN+LL
Sbjct: 817  PKKTDSLEMRDFRPIACCNVLYKVVSKFLANRFKVILPRVISECQSAFVKGRLLMENVLL 876

Query: 248  CQELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACVTSTM 307
              ELV  YH  +  PRC +K+D  KA+D V WDF+   L AIG P +F+ WI+ C+++  
Sbjct: 877  ASELVKDYHKETVLPRCVMKIDISKAFDYVQWDFVLNSLEAIGVPARFIHWIKLCISTPS 936

Query: 308  FSIMINGSLKGFFHGRKGVK---------------------------------------- 367
            FS+ +NG L G+F  ++G++                                        
Sbjct: 937  FSVQVNGELSGYFQSKRGLRQGCSLSTYLFVLCMNVLSQKIDKAVLERKFQFHPKCKNLS 996

Query: 368  LTYLTFADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLA 427
            LT+L FADDLM+F    +  I  +      F + SGL  +  KS++++AG+  E    + 
Sbjct: 997  LTHLCFADDLMVFVEGTKEFIEGVLSVFDGFAKWSGLSISIEKSTVYMAGIQEEKKRRIL 1056

Query: 428  ACMGFVRGNLPIRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVRFV 487
                F  G+LP+RYLGLPL+   +R  DY PLI+RI S+I SWT++ LS+AGRLQL++ +
Sbjct: 1057 VNFPFAEGSLPVRYLGLPLMTQSMRRQDYLPLIERIRSKICSWTSQFLSYAGRLQLLKSM 1116

Query: 488  LRSLQVYWASVFVLPAYVHHEVDKILISYLWRGKEEGRGGIKVAWVDVCLPFEESGLGIR 547
            L S+  +WA  F LP+    EV+++   +LW G      G KVAW ++C P  E GLG+R
Sbjct: 1117 LVSIVNFWACAFRLPSKCIKEVEQLCALFLWTGPALKSSGAKVAWREICKPLNEGGLGVR 1176

Query: 548  DGPSWNIASTLKILLLMLTNSGSLWVAWVKAYILKGRSLWD--VDSRVGRSWRLRAILRK 607
                 N    LK++  ML    SLW  W+K Y+LK RS W+  V+ RVG  W  R +L+ 
Sbjct: 1177 SLKEVNTVYGLKLIWRMLAGD-SLWGKWIKEYLLKKRSFWEVKVNFRVG-IWMWRKMLKL 1236

Query: 608  REKLKHLVWMKVGNSNSCRVWLDSWLLGDAILEQVGERVMYDAASWREARLSDFI----- 660
            RE  K    +++GN      W D W     I + +GER   D    +EA L + +     
Sbjct: 1237 REIAKTFYKIEIGNGRHISFWYDCWSEKGVIFDLMGERGFIDLGIRKEATLEEAVLNLRQ 1296

[Close]
BLAST of MELO3C011691 vs. NCBI nr
Match: gi|922559491|ref|XP_013607918.1| (PREDICTED: uncharacterized protein LOC106314621 [Brassica oleracea var. oleracea])

HSP 1 Score: 448.7 bits (1153), Expect = 1.7e-122
Identity = 246/627 (39.23%), Postives = 357/627 (56.94%), Query Frame = 1 

Query: 22   LEKASLRQKSRIRWLKLGDQNTTFFHRSVCSRMSRNTLRSLVDSDGTRVSSHDGVAQMAV 81
            LE+  L QK++I WL +GD N   FHR+   R  RN++R +   DG+   S D + Q AV
Sbjct: 776  LEEKVLSQKAKIHWLDVGDGNNKSFHRAATVREIRNSIREIKRLDGSVADSQDDIKQEAV 835

Query: 82   NYFSNSLGSQEIGYRELSP-VIDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAP 141
            ++F   L      Y  +S   +  +V ++ SE+   +L   IS EE+R+VLFSM   K+P
Sbjct: 836  SHFHQFLIHTPSEYEGISVNELKSLVNYECSEDDRSSLMREISSEEIRKVLFSMPRDKSP 895

Query: 142  GPDGFFTGFFKGAWSVVGEDFCDAVLHFFETCYLPVGVNATAITLIPKHNGAERLEDFRL 201
            GPDGF + FFK +W+V G DF  A+  FF+  +LP G+N+T + LIPK N A  ++D+RL
Sbjct: 896  GPDGFTSEFFKASWAVTGGDFVIAIKSFFDKGFLPKGINSTILALIPKKNDAVYMKDYRL 955

Query: 202  ISCCNVLYKCISKILADRLRVWLPSFISSNQSAFVPGRSIIENILLCQELVGGYHLNSGK 261
            ISCCNV+YK ISK+LA+R++  LP FIS NQSAFV  R ++EN+LL  ELV  YH +S  
Sbjct: 956  ISCCNVIYKVISKLLANRMKRILPLFISLNQSAFVKDRLLMENVLLASELVKSYHKDSVT 1015

Query: 262  PRCTLKVDHQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACVTSTMFSIMINGSLKGFFH 321
             RC +K+D  KA+DSV W FL  +L A+  P KF+ WI+ C+    FSI ING L G+F+
Sbjct: 1016 ERCAVKIDISKAFDSVQWSFLVSVLEALNFPEKFIVWIKKCIELASFSIQINGELAGYFN 1075

Query: 322  GRKGV-------------------------------------KLTYLTFA---DDLMIFC 381
             ++G+                                     K  +LT     DD+++F 
Sbjct: 1076 SKRGLRQGCALSPYLFVISMQVLSKLLDKAATEKQMGFHPYCKELHLTHICFADDVLVFS 1135

Query: 382  AADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLAACMGFVRGNLPIRY 441
               + S+  I E  Q+F ++SGL  +  KS++++AGV   ++  +     F RG+LP+RY
Sbjct: 1136 DGKKKSVEGILEVFQRFEKISGLSISLEKSTLYLAGVQETDSEAILDQFPFERGSLPVRY 1195

Query: 442  LGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVRFVLRSLQVYWASVFVL 501
            LGLPLL  R+  +DY+PLI RI +RI SWTAR LSFAGRLQL+  VL S+  +W S + L
Sbjct: 1196 LGLPLLTKRMNVHDYSPLISRIRNRISSWTARHLSFAGRLQLIGSVLYSITNFWMSAYRL 1255

Query: 502  PAYVHHEVDKILISYLWRGKEEGRGGIKVAWVDVCLPFEESGLGIRDGPSWNIASTLKIL 561
            P     E++ I  ++LW G        KVAWVDV  P +E GLG+++    N  S LK++
Sbjct: 1256 PNQCIQEINSICAAFLWSGPVLSTHKAKVAWVDVFKPKDEGGLGLKNLADANKVSCLKLI 1315

Query: 562  LLMLTNSGSLWVAWVKAYILKGRSLWDVDSRVGR-SWRLRAILRKREKLKHLVWMKVGNS 607
              +++   SLWV W+  Y+++  S W V+ +    SW  + +L+ R     L   +V + 
Sbjct: 1316 WRIISTRSSLWVKWIWKYLIRKGSFWSVNEKSNSGSWMWKKLLKLRPLAMQLTKKEVNSG 1375

The following BLAST results are available for this feature:
BLAST of MELO3C011691 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YTX2_XENLA3.3e-2526.40Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=3 SV=1[more]
LORF2_HUMAN4.3e-2522.01LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1[more]
LIN1_NYCCO2.9e-2122.16LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1[more]
RNHX1_ARATH1.9e-2032.20Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 P... [more]
LORF2_MOUSE1.2e-1428.86LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2[more]
BLAST of MELO3C011691 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D3AY02_BRAOL1.9e-11235.37Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
O82216_ARATH3.5e-10635.90Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=A... [more]
Q9FZG5_ARATH4.4e-10138.00T2E6.4 OS=Arabidopsis thaliana PE=4 SV=1[more]
O64612_ARATH3.7e-10038.21Putative reverse transcriptase OS=Arabidopsis thaliana GN=At2g18820 PE=4 SV=1[more]
Q9ZQQ6_ARATH3.4e-9332.46Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=A... [more]
BLAST of MELO3C011691 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G24255.15.4e-3434.96 RNA-directed DNA polymerase (reverse transcriptase)-related family p... [more]
AT1G43760.17.3e-3140.86 DNAse I-like superfamily protein[more]
AT3G25720.13.4e-1231.30 RNA-directed DNA polymerase (reverse transcriptase)-related family p... [more]
AT4G20520.11.5e-0737.18 RNA binding;RNA-directed DNA polymerases[more]
BLAST of MELO3C011691 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102432|ref|XP_008452126.1|4.1e-23369.15PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo][more]
gi|659121154|ref|XP_008460525.1|1.4e-17782.44PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein At1g65750 [Cucum... [more]
gi|659126450|ref|XP_008463188.1|2.0e-14782.30PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo][more]
gi|659126450|ref|XP_008463188.1|8.8e-1060.00PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo][more]
gi|922559491|ref|XP_013607918.1|1.7e-12239.23PREDICTED: uncharacterized protein LOC106314621 [Brassica oleracea var. oleracea... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011691T1MELO3C011691T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 186..325
score: 9.4
IPR000477Reverse transcriptase domainPROFILEPS50878RT_POLcoord: 167..405
score: 9
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 22..438
score: 3.8E
NoneNo IPR availablePANTHERPTHR19446:SF368SUBFAMILY NOT NAMEDcoord: 22..438
score: 3.8E
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 120..374
score: 6.97

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C011691Watermelon (97103) v2mewmbB305
MELO3C011691Wax gourdmewgoB350
MELO3C011691Cucurbita maxima (Rimu)cmameB027
MELO3C011691Cucurbita maxima (Rimu)cmameB413
MELO3C011691Cucurbita moschata (Rifu)cmomeB016
MELO3C011691Cucurbita moschata (Rifu)cmomeB404
MELO3C011691Watermelon (97103) v1mewmB305
MELO3C011691Cucurbita pepo (Zucchini)cpemeB514
MELO3C011691Cucurbita pepo (Zucchini)cpemeB720
MELO3C011691Bottle gourd (USVL1VR-Ls)lsimeB472
MELO3C011691Silver-seed gourdcarmeB0608
MELO3C011691Silver-seed gourdcarmeB0626