MELO3C011476.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTAAGAAAGAAAAGACAAGTAGAGTGATAATAATTAAGTGAATTTTGAATGGCAGAAAGTAGAAGAGAGAAGCTTAATGAAGCCGCCATTGAAGGAAACGTAACAACCTTGTTAGAGTTGCTCCAACAAGATCCACTTTTATTAACCAGACTCAATTACCTCAACAACTTTAACGAGACTCCATTGCACGTGGCTTCTCTTCTTGGTCACCCCACATTTGTTCACGAGCTTCTCAAGCGAAGCCCTCGGTTGGCCAAGGAGTTGGATTCTCGCGGTTGTTCCGCCCTCCATTTTGCTGCTGCCGAGGGCTTTTTAGACATTGTCAAGATTCTGGTGCGAGTTGATCCTGATATGTGTTCTATGCACAACCAAGATGGCATGAACCCAATTCATCTCGCCGCCATGAGAGGCCGGGTTGATGTCTTGGCTGAGCTCGTTCGAGTCAGACCCCTAGCCGCTCGAACTGCCGTGGACGGCGGTGGAACGGTGTTGCATTTGTGTGTTAAGTATAATCAGCTTGAAGCTCTGAAGATGTTGATTGAAACTATTGGAGTGAAAGACAGAGACAAAGGGTTTATTAATAGTCAAGATGATTATGGGTTCACTATTCTTCATTTAGCAGTCTCCAACAAACAACTTCAGGTAATTATTATTTGA GTAAGAAAGAAAAGACAAGTAGAGTGATAATAATTAAGTGAATTTTGAATGGCAGAAAGTAGAAGAGAGAAGCTTAATGAAGCCGCCATTGAAGGAAACGTAACAACCTTGTTAGAGTTGCTCCAACAAGATCCACTTTTATTAACCAGACTCAATTACCTCAACAACTTTAACGAGACTCCATTGCACGTGGCTTCTCTTCTTGGTCACCCCACATTTGTTCACGAGCTTCTCAAGCGAAGCCCTCGGTTGGCCAAGGAGTTGGATTCTCGCGGTTGTTCCGCCCTCCATTTTGCTGCTGCCGAGGGCTTTTTAGACATTGTCAAGATTCTGGTGCGAGTTGATCCTGATATGTGTTCTATGCACAACCAAGATGGCATGAACCCAATTCATCTCGCCGCCATGAGAGGCCGGGTTGATGTCTTGGCTGAGCTCGTTCGAGTCAGACCCCTAGCCGCTCGAACTGCCGTGGACGGCGGTGGAACGGTGTTGCATTTGTGTGTTAAGTATAATCAGCTTGAAGCTCTGAAGATGTTGATTGAAACTATTGGAGTGAAAGACAGAGACAAAGGGTTTATTAATAGTCAAGATGATTATGGGTTCACTATTCTTCATTTAGCAGTCTCCAACAAACAACTTCAGGTAATTATTATTTGA ATGGCAGAAAGTAGAAGAGAGAAGCTTAATGAAGCCGCCATTGAAGGAAACGTAACAACCTTGTTAGAGTTGCTCCAACAAGATCCACTTTTATTAACCAGACTCAATTACCTCAACAACTTTAACGAGACTCCATTGCACGTGGCTTCTCTTCTTGGTCACCCCACATTTGTTCACGAGCTTCTCAAGCGAAGCCCTCGGTTGGCCAAGGAGTTGGATTCTCGCGGTTGTTCCGCCCTCCATTTTGCTGCTGCCGAGGGCTTTTTAGACATTGTCAAGATTCTGGTGCGAGTTGATCCTGATATGTGTTCTATGCACAACCAAGATGGCATGAACCCAATTCATCTCGCCGCCATGAGAGGCCGGGTTGATGTCTTGGCTGAGCTCGTTCGAGTCAGACCCCTAGCCGCTCGAACTGCCGTGGACGGCGGTGGAACGGTGTTGCATTTGTGTGTTAAGTATAATCAGCTTGAAGCTCTGAAGATGTTGATTGAAACTATTGGAGTGAAAGACAGAGACAAAGGGTTTATTAATAGTCAAGATGATTATGGGTTCACTATTCTTCATTTAGCAGTCTCCAACAAACAACTTCAGGTAATTATTATTTGA MAESRREKLNEAAIEGNVTTLLELLQQDPLLLTRLNYLNNFNETPLHVASLLGHPTFVHELLKRSPRLAKELDSRGCSALHFAAAEGFLDIVKILVRVDPDMCSMHNQDGMNPIHLAAMRGRVDVLAELVRVRPLAARTAVDGGGTVLHLCVKYNQLEALKMLIETIGVKDRDKGFINSQDDYGFTILHLAVSNKQLQVIII
BLAST of MELO3C011476.2 vs. NCBI nr
Match: XP_008445523.1 (PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo]) HSP 1 Score: 194.5 bits (493), Expect = 3.5e-46 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of MELO3C011476.2 vs. NCBI nr
Match: XP_008445597.1 (PREDICTED: E3 ubiquitin-protein ligase mib1-like [Cucumis melo]) HSP 1 Score: 177.6 bits (449), Expect = 4.4e-41 Identity = 190/202 (94.06%), Postives = 191/202 (94.55%), Query Frame = 0
BLAST of MELO3C011476.2 vs. NCBI nr
Match: XP_004144273.1 (PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis sativus] >KGN47595.1 hypothetical protein Csa_6G363020 [Cucumis sativus]) HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30 Identity = 175/183 (95.63%), Postives = 177/183 (96.72%), Query Frame = 0
BLAST of MELO3C011476.2 vs. NCBI nr
Match: XP_022997124.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita maxima]) HSP 1 Score: 104.8 bits (260), Expect = 3.6e-19 Identity = 54/74 (72.97%), Postives = 66/74 (89.19%), Query Frame = 0
BLAST of MELO3C011476.2 vs. NCBI nr
Match: XP_022962092.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita moschata]) HSP 1 Score: 102.4 bits (254), Expect = 1.8e-18 Identity = 53/74 (71.62%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of MELO3C011476.2 vs. TrEMBL
Match: tr|A0A1S3BDM7|A0A1S3BDM7_CUCME (ankyrin repeat-containing protein At3g12360-like OS=Cucumis melo OX=3656 GN=LOC103488513 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.3e-46 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of MELO3C011476.2 vs. TrEMBL
Match: tr|A0A1S3BD39|A0A1S3BD39_CUCME (E3 ubiquitin-protein ligase mib1-like OS=Cucumis melo OX=3656 GN=LOC103488577 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.9e-41 Identity = 190/202 (94.06%), Postives = 191/202 (94.55%), Query Frame = 0
BLAST of MELO3C011476.2 vs. TrEMBL
Match: tr|A0A0A0KD35|A0A0A0KD35_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363020 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 7.9e-31 Identity = 175/183 (95.63%), Postives = 177/183 (96.72%), Query Frame = 0
BLAST of MELO3C011476.2 vs. TrEMBL
Match: tr|A0A2P5FDW4|A0A2P5FDW4_9ROSA (Transmembrane protein OS=Trema orientalis OX=63057 GN=TorRG33x02_082120 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.0e-13 Identity = 44/70 (62.86%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of MELO3C011476.2 vs. TrEMBL
Match: tr|A0A1R3GHY3|A0A1R3GHY3_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_35174 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 9.7e-13 Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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