MELO3C011310 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C011310
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description30S ribosomal protein S19
Locationchr3 : 24764571 .. 24766325 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCAATCTTGGAAAGTCCAACAATAGTAAAGCCCAATGATTTAACTTAAAAAAAAAAAAAAAGGAAACCCTAGATTCCACAATTCTTTCATCTTCTTCTTCAACTCTCACGTCTCTGCCTTTCACAAATCTCTAATCTTCATTCTTCACAGTATCATCTTTCTCTTCGTTCATGTCGCCACGATCTATATGGAAGGGCGGTTTTGTTGATGCATTCCTGATGAAAATGAAGAAGAATGTAGAACCTCTTATGAACAGGAAAATTTGGTCACGTGGATCTATGATTCTGCCGGAATTCGTTGGTAGCACCGTACGAGTTTACAATGGGAAAAATTTTGTTCGTTGTAAGATCACTGAAGGAAGAGTTGGTCATAAGTTTGGAGAGTTTGCTATGACACGGAAACGAAGAATTGCGAGATCAAATAGTGCACCGGCAAAAAGAGGGGGGAAAAAGTGAAGTTCAAGCGCATATGCAATTTGGTATTCACTTTTTCTTTCTTATTCTCAATTCAAGGTTAGTAAAATCAGTCTGGTGCTGTCAATGTAGTTTGTGTTTTCCTATTTTGCGCCACAGACCGTCACTGTTTTCGTTTGATATCGCCAAAGCTGTTATTGGTTTCTGTATGATTTTGATATACAACTGTATTTCAAATTCTATATGAGTTCTGTTCTACCATGCTTTGACAGAACTATCTCGAGATATTGGGGTAATAACAATTTTTTGATCTTGAAATTCTGAAATTATAAGGACGTCCATGTTACAAGATAGCCTTTTTACTTTTGAAAACTTGTGTTAAATGTTGATACAATAAATTTTCCTCGTTAATTCATTCATATACTTGAACTTTTCATCATTTTTCGTTTCTTCAAGCAAGTTCTTTAAAAACTACATTTTTTGGTATTCACAAACTGGACATAGTTTTTACAAACGCATACCAAAACAAAGGTAAAAATCAGAAACAAAAAATTAAATGGTTATTGAAGGAACCATAATTTAAAATCAGAATTTCTTTTTTTAAGTTCAACAAAGTAAAAGGGTGATGCTCCTCATTCTAACTATAAGTAATCATATGCTAATTGAAAGACCCTTTTTCAAAAGTGCACAAACAAATTTATAGTCATTTGAACAAGAAGAATGGGTCATTCAAGACTGCCTATTAGTAAAATAAACACTATTATTTACTATTTCTTATAGTTTTTACTATTTTACCTTTACAGTGTTTATCATTTTTCATCTGATGCATAGTATTATAATCCAAATTAAAATAATCAATACCCCTTATATTATATGTATTTATCTTGGATGCAATCTATCCAAGCATTCAATGTTTCATCTAAAATTATTGTAATCTATATATATATTTTAAAAAAAGTTTCTATTTTTGATATTTCTAGAGATAGGGTACTTGGCTTGAAATTTGTTCTCAGAACACCGATTTCTTTCTCGGAGGCAATGTCCGCCTCTTTCTTGCTCATCTTGGCATAGCTCTGCTCGCATTAGTATCAACGAATTTTGTGTATGAGCTATGGTGGGTCGATGCCATTGTAGGCCATCAGTTGCCGAGGTGTAAGCTCCATTGGCTCCAGGGGGAACTGAGAAGAACGGTAGCTTCAGTTGAAATGGTGAATTCAACCATTTTTCATATTCATTCTCATTCGAATGGGGAGAAAAGGCAAAGAATTTTGAATATGTCCCATTTGGAATAATTTGACTTGATAACCCTTGCACTAATGAAAAATACTTATTGATCCATC

mRNA sequence

AATCAATCTTGGAAAGTCCAACAATAGTAAAGCCCAATGATTTAACTTAAAAAAAAAAAAAAAGGAAACCCTAGATTCCACAATTCTTTCATCTTCTTCTTCAACTCTCACGTCTCTGCCTTTCACAAATCTCTAATCTTCATTCTTCACAGTATCATCTTTCTCTTCGTTCATGTCGCCACGATCTATATGGAAGGGCGGTTTTGTTGATGCATTCCTGATGAAAATGAAGAAGAATGTAGAACCTCTTATGAACAGGAAAATTTGGTCACGTGGATCTATGATTCTGCCGGAATTCGTTGGTAGCACCGTACGAGTTTACAATGGGAAAAATTTTGTTCGTTGTAAGATCACTGAAGGAAGAGTTGGTCATAAGTTTGGAGAGTTTGCTATGACACGGAAACGAAGAATTGCGAGATCAAATAGTGCACCGGCAAAAAGAGGGGGGAAAAAGTGAAGTTCAAGCGCATATGCAATTTGGTATTCACTTTTTCTTTCTTATTCTCAATTCAAGAGATAGGGTACTTGGCTTGAAATTTGTTCTCAGAACACCGATTTCTTTCTCGGAGGCAATGTCCGCCTCTTTCTTGCTCATCTTGGCATAGCTCTGCTCGCATTAGTATCAACGAATTTTGTGTATGAGCTATGGTGGGTCGATGCCATTGTAGGCCATCAGTTGCCGAGGTGTAAGCTCCATTGGCTCCAGGGGGAACTGAGAAGAACGGTAGCTTCAGTTGAAATGGTGAATTCAACCATTTTTCATATTCATTCTCATTCGAATGGGGAGAAAAGGCAAAGAATTTTGAATATGTCCCATTTGGAATAATTTGACTTGATAACCCTTGCACTAATGAAAAATACTTATTGATCCATC

Coding sequence (CDS)

ATGTCGCCACGATCTATATGGAAGGGCGGTTTTGTTGATGCATTCCTGATGAAAATGAAGAAGAATGTAGAACCTCTTATGAACAGGAAAATTTGGTCACGTGGATCTATGATTCTGCCGGAATTCGTTGGTAGCACCGTACGAGTTTACAATGGGAAAAATTTTGTTCGTTGTAAGATCACTGAAGGAAGAGTTGGTCATAAGTTTGGAGAGTTTGCTATGACACGGAAACGAAGAATTGCGAGATCAAATAGTGCACCGGCAAAAAGAGGGGGGAAAAAGTGA

Protein sequence

MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK*
Homology
[Close]
BLAST of MELO3C011310 vs. Swiss-Prot
Match: RT19_PETHY (Ribosomal protein S19, mitochondrial OS=Petunia hybrida GN=RPS19 PE=2 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 3.4e-32
Identity = 66/94 (70.21%), Postives = 73/94 (77.66%), Query Frame = 1 

Query: 1  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
          M  RSIWKG FVDAFL++MKK  + L NRKIWSR S ILPEFV   VR+YNGK FVRCKI
Sbjct: 1  MPRRSIWKGSFVDAFLLRMKKKRDLLFNRKIWSRRSSILPEFVDCFVRIYNGKTFVRCKI 60

Query: 61 TEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK 95
          TEG+VGHKFGEFA TRKRR +R+N  P ++ GKK
Sbjct: 61 TEGKVGHKFGEFAFTRKRRPSRTNIGPGRKRGKK 94

[Close]
BLAST of MELO3C011310 vs. Swiss-Prot
Match: RT19_ARATH (40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana GN=RPS19 PE=1 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 7.6e-24
Identity = 56/77 (72.73%), Postives = 59/77 (76.62%), Query Frame = 1 

Query: 1   MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
           M  RS+WK  FVDAFLMK KKN    +NRKIWSR S ILPE+V S VR+YNGK  VRCKI
Sbjct: 131 MMSRSVWKDPFVDAFLMK-KKNAA--LNRKIWSRRSTILPEYVDSAVRIYNGKTHVRCKI 190

Query: 61  TEGRVGHKFGEFAMTRK 78
           TEG+VGHKFGEFA TRK
Sbjct: 191 TEGKVGHKFGEFAFTRK 204

[Close]
BLAST of MELO3C011310 vs. Swiss-Prot
Match: RT19_MARPO (Ribosomal protein S19, mitochondrial OS=Marchantia polymorpha GN=RPS19 PE=3 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 4.8e-18
Identity = 48/86 (55.81%), Postives = 53/86 (61.63%), Query Frame = 1 

Query: 4  RSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEG 63
          RSIWKG FVD  L K KK     +  +IWSR S ILP+FVG   ++YNGK FV  KITE 
Sbjct: 3  RSIWKGPFVDTCLFKQKK-----IRWRIWSRRSCILPQFVGCYAQIYNGKGFVGLKITEE 62

Query: 64 RVGHKFGEFAMTRKRRIARSNSAPAK 90
           VGHKFGEFA TRK       + P+K
Sbjct: 63 MVGHKFGEFASTRKTSSLGKRALPSK 83

[Close]
BLAST of MELO3C011310 vs. Swiss-Prot
Match: RT19_TETSU (Ribosomal protein S19, mitochondrial OS=Tetraselmis subcordiformis GN=RPS19 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 8.4e-15
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 1 

Query: 4  RSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEG 63
          R+IWKG F+D F  +  KN     N KI+SR S++ P+F+G  V +YNG  ++  KI E 
Sbjct: 3  RAIWKGPFIDPFFFR--KNGSSNSNNKIYSRRSVVSPKFIGREVEIYNGHKWITIKIKED 62

Query: 64 RVGHKFGEFAMTRKRRIARSNS 86
           +GHKFGEFA TRK  I +  +
Sbjct: 63 MIGHKFGEFAFTRKATIHKKKT 82

[Close]
BLAST of MELO3C011310 vs. Swiss-Prot
Match: RS19_RHOCS (30S ribosomal protein S19 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rpsS PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-14
Identity = 39/76 (51.32%), Postives = 47/76 (61.84%), Query Frame = 1 

Query: 4  RSIWKGGFVDAFLMKMKKNVEPLMNR---KIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 63
          RS+WKG FVD +L+K  +           KIWSR S ILP+FVG T  VYNG+ F+   +
Sbjct: 3  RSVWKGPFVDGYLLKKAEKARASGRNEIIKIWSRRSTILPQFVGLTFGVYNGQKFLPVLV 62

Query: 64 TEGRVGHKFGEFAMTR 77
          TE  +GHKFGEF+ TR
Sbjct: 63 TENMIGHKFGEFSPTR 78

[Close]
BLAST of MELO3C011310 vs. TrEMBL
Match: A0A0A0LPU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382770 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 3.5e-44
Identity = 88/94 (93.62%), Postives = 91/94 (96.81%), Query Frame = 1 

Query: 1  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
          MSPRSIWKGGFVDAFL KMKKNVEPLMN+KIWSRGSMILPEFVGSTVRVYNGKNF+RCKI
Sbjct: 1  MSPRSIWKGGFVDAFLSKMKKNVEPLMNKKIWSRGSMILPEFVGSTVRVYNGKNFIRCKI 60

Query: 61 TEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK 95
          TE RVGHKFGEFAMTRKR+IARSNSAP KRGGKK
Sbjct: 61 TEERVGHKFGEFAMTRKRKIARSNSAPVKRGGKK 94

[Close]
BLAST of MELO3C011310 vs. TrEMBL
Match: D5I3D4_CITLA (Ribosomal protein S19 OS=Citrullus lanatus GN=rps19-2 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 9.6e-34
Identity = 69/92 (75.00%), Postives = 80/92 (86.96%), Query Frame = 1 

Query: 1  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
          M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK FVRCKI
Sbjct: 1  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTFVRCKI 60

Query: 61 TEGRVGHKFGEFAMTRKRRIARSNSAPAKRGG 93
          TEGRVGHKFGEFA+TRKRR++R+N  P K+GG
Sbjct: 61 TEGRVGHKFGEFALTRKRRLSRTNIGPGKKGG 92

[Close]
BLAST of MELO3C011310 vs. TrEMBL
Match: D5I3G6_CUCPE (Ribosomal protein S19 OS=Cucurbita pepo GN=rps19-2 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 6.3e-33
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 1 

Query: 1  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
          M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK FVRCKI
Sbjct: 1  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTFVRCKI 60

Query: 61 TEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGK 94
          TEGRVGHKFGEFA+TRKRR++R+N  P K+ G+
Sbjct: 61 TEGRVGHKFGEFALTRKRRLSRTNIGPGKKRGE 93

[Close]
BLAST of MELO3C011310 vs. TrEMBL
Match: D5I3F0_CUCPE (Ribosomal protein S19 OS=Cucurbita pepo GN=rps19-1 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 6.3e-33
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 1 

Query: 1  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
          M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK FVRCKI
Sbjct: 1  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTFVRCKI 60

Query: 61 TEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGK 94
          TEGRVGHKFGEFA+TRKRR++R+N  P K+ G+
Sbjct: 61 TEGRVGHKFGEFALTRKRRLSRTNIGPGKKRGE 93

[Close]
BLAST of MELO3C011310 vs. TrEMBL
Match: D5I3A0_CITLA (Ribosomal protein S19 OS=Citrullus lanatus GN=rps19-1 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.4e-32
Identity = 67/92 (72.83%), Postives = 78/92 (84.78%), Query Frame = 1 

Query: 1  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
          M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK  VRCKI
Sbjct: 1  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKI 60

Query: 61 TEGRVGHKFGEFAMTRKRRIARSNSAPAKRGG 93
          TEGR+GHKFGEFA TRKRR++R+N  P K+GG
Sbjct: 61 TEGRIGHKFGEFASTRKRRLSRTNIGPGKKGG 92

[Close]
BLAST of MELO3C011310 vs. TAIR10
Match: AT5G47320.1 (AT5G47320.1 ribosomal protein S19)

HSP 1 Score: 110.9 bits (276), Expect = 4.3e-25
Identity = 56/77 (72.73%), Postives = 59/77 (76.62%), Query Frame = 1 

Query: 1   MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
           M  RS+WK  FVDAFLMK KKN    +NRKIWSR S ILPE+V S VR+YNGK  VRCKI
Sbjct: 131 MMSRSVWKDPFVDAFLMK-KKNAA--LNRKIWSRRSTILPEYVDSAVRIYNGKTHVRCKI 190

Query: 61  TEGRVGHKFGEFAMTRK 78
           TEG+VGHKFGEFA TRK
Sbjct: 191 TEGKVGHKFGEFAFTRK 204

[Close]
BLAST of MELO3C011310 vs. TAIR10
Match: ATCG00820.1 (ATCG00820.1 ribosomal protein S19)

HSP 1 Score: 51.6 bits (122), Expect = 3.1e-07
Identity = 29/90 (32.22%), Postives = 45/90 (50.00%), Query Frame = 1 

Query: 4  RSIWKGGFVDAFLMKMKKNVEPLMNRKI---WSRGSMILPEFVGSTVRVYNGKNFVRCKI 63
          RS+ K  FV   L++  + +     ++I   WSR S I+P  +G T+ ++NG+  +   I
Sbjct: 3  RSLKKNPFVAKHLLRKIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYI 62

Query: 64 TEGRVGHKFGEFAMTRKRRIARSNSAPAKR 91
           +  VGHK GEF+ T   R    N   ++R
Sbjct: 63 IDLMVGHKLGEFSPTINFRGHAKNDNRSRR 92

[Close]
BLAST of MELO3C011310 vs. NCBI nr
Match: gi|700207885|gb|KGN63004.1| (hypothetical protein Csa_2G382770 [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 5.1e-44
Identity = 88/94 (93.62%), Postives = 91/94 (96.81%), Query Frame = 1 

Query: 1  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
          MSPRSIWKGGFVDAFL KMKKNVEPLMN+KIWSRGSMILPEFVGSTVRVYNGKNF+RCKI
Sbjct: 1  MSPRSIWKGGFVDAFLSKMKKNVEPLMNKKIWSRGSMILPEFVGSTVRVYNGKNFIRCKI 60

Query: 61 TEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK 95
          TE RVGHKFGEFAMTRKR+IARSNSAP KRGGKK
Sbjct: 61 TEERVGHKFGEFAMTRKRKIARSNSAPVKRGGKK 94

[Close]
BLAST of MELO3C011310 vs. NCBI nr
Match: gi|295311661|ref|YP_003587264.1| (ribosomal protein S19 [Citrullus lanatus])

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-33
Identity = 69/92 (75.00%), Postives = 80/92 (86.96%), Query Frame = 1 

Query: 1  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
          M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK FVRCKI
Sbjct: 1  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTFVRCKI 60

Query: 61 TEGRVGHKFGEFAMTRKRRIARSNSAPAKRGG 93
          TEGRVGHKFGEFA+TRKRR++R+N  P K+GG
Sbjct: 61 TEGRVGHKFGEFALTRKRRLSRTNIGPGKKGG 92

[Close]
BLAST of MELO3C011310 vs. NCBI nr
Match: gi|295311704|ref|YP_003587364.1| (ribosomal protein S19 [Cucurbita pepo])

HSP 1 Score: 147.9 bits (372), Expect = 9.0e-33
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 1 

Query: 1  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
          M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK FVRCKI
Sbjct: 1  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTFVRCKI 60

Query: 61 TEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGK 94
          TEGRVGHKFGEFA+TRKRR++R+N  P K+ G+
Sbjct: 61 TEGRVGHKFGEFALTRKRRLSRTNIGPGKKRGE 93

[Close]
BLAST of MELO3C011310 vs. NCBI nr
Match: gi|295311705|ref|YP_003587380.1| (ribosomal protein S19 [Cucurbita pepo])

HSP 1 Score: 147.9 bits (372), Expect = 9.0e-33
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 1 

Query: 1  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
          M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK FVRCKI
Sbjct: 1  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTFVRCKI 60

Query: 61 TEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGK 94
          TEGRVGHKFGEFA+TRKRR++R+N  P K+ G+
Sbjct: 61 TEGRVGHKFGEFALTRKRRLSRTNIGPGKKRGE 93

[Close]
BLAST of MELO3C011310 vs. NCBI nr
Match: gi|295311660|ref|YP_003587230.1| (ribosomal protein S19 [Citrullus lanatus])

HSP 1 Score: 146.0 bits (367), Expect = 3.4e-32
Identity = 67/92 (72.83%), Postives = 78/92 (84.78%), Query Frame = 1 

Query: 1  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKI 60
          M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK  VRCKI
Sbjct: 1  MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTSVRCKI 60

Query: 61 TEGRVGHKFGEFAMTRKRRIARSNSAPAKRGG 93
          TEGR+GHKFGEFA TRKRR++R+N  P K+GG
Sbjct: 61 TEGRIGHKFGEFASTRKRRLSRTNIGPGKKGG 92

The following BLAST results are available for this feature:
BLAST of MELO3C011310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RT19_PETHY3.4e-3270.21Ribosomal protein S19, mitochondrial OS=Petunia hybrida GN=RPS19 PE=2 SV=2[more]
RT19_ARATH7.6e-2472.7340S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana GN=RPS19 PE=1 S... [more]
RT19_MARPO4.8e-1855.81Ribosomal protein S19, mitochondrial OS=Marchantia polymorpha GN=RPS19 PE=3 SV=2[more]
RT19_TETSU8.4e-1546.34Ribosomal protein S19, mitochondrial OS=Tetraselmis subcordiformis GN=RPS19 PE=3... [more]
RS19_RHOCS1.4e-1451.3230S ribosomal protein S19 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN... [more]
BLAST of MELO3C011310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPU9_CUCSA3.5e-4493.62Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382770 PE=3 SV=1[more]
D5I3D4_CITLA9.6e-3475.00Ribosomal protein S19 OS=Citrullus lanatus GN=rps19-2 PE=3 SV=1[more]
D5I3G6_CUCPE6.3e-3373.12Ribosomal protein S19 OS=Cucurbita pepo GN=rps19-2 PE=3 SV=1[more]
D5I3F0_CUCPE6.3e-3373.12Ribosomal protein S19 OS=Cucurbita pepo GN=rps19-1 PE=3 SV=1[more]
D5I3A0_CITLA2.4e-3272.83Ribosomal protein S19 OS=Citrullus lanatus GN=rps19-1 PE=3 SV=1[more]
BLAST of MELO3C011310 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G47320.14.3e-2572.73 ribosomal protein S19[more]
ATCG00820.13.1e-0732.22ATCG00820.1 ribosomal protein S19[more]
BLAST of MELO3C011310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700207885|gb|KGN63004.1|5.1e-4493.62hypothetical protein Csa_2G382770 [Cucumis sativus][more]
gi|295311661|ref|YP_003587264.1|1.4e-3375.00ribosomal protein S19 [Citrullus lanatus][more]
gi|295311704|ref|YP_003587364.1|9.0e-3373.12ribosomal protein S19 [Cucurbita pepo][more]
gi|295311705|ref|YP_003587380.1|9.0e-3373.12ribosomal protein S19 [Cucurbita pepo][more]
gi|295311660|ref|YP_003587230.1|3.4e-3272.83ribosomal protein S19 [Citrullus lanatus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002222Ribosomal_S19
IPR005732Ribosomal_S19_bac-type
IPR020934Ribosomal_S19_CS
IPR023575Ribosomal_S19_SF
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005763 mitochondrial small ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU48658melon EST collection version 4.0transcribed_cluster
MU49655melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011310T1MELO3C011310T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU48658MU48658transcribed_cluster
MU49655MU49655transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002222Ribosomal protein S19/S15PRINTSPR00975RIBOSOMALS19coord: 31..50
score: 5.1E-16coord: 51..63
score: 5.1E-16coord: 63..78
score: 5.1
IPR002222Ribosomal protein S19/S15HAMAPMF_00531Ribosomal_S19coord: 2..90
score: 19
IPR002222Ribosomal protein S19/S15PIRPIRSF002144RPS19p_RPS19a_RPS15e_RPS19ocoord: 1..94
score: 8.9
IPR002222Ribosomal protein S19/S15PANTHERPTHR11880RIBOSOMAL PROTEIN S19P FAMILY MEMBERcoord: 1..79
score: 1.7
IPR002222Ribosomal protein S19/S15PFAMPF00203Ribosomal_S19coord: 4..78
score: 1.4
IPR005732Ribosomal protein S19, bacterial-typeTIGRFAMsTIGR01050TIGR01050coord: 3..86
score: 9.5
IPR020934Ribosomal protein S19 conserved sitePROSITEPS00323RIBOSOMAL_S19coord: 51..75
scor
IPR023575Ribosomal protein S19, superfamilyGENE3DG3DSA:3.30.860.10coord: 3..86
score: 6.8
IPR023575Ribosomal protein S19, superfamilyunknownSSF54570Ribosomal protein S19coord: 4..80
score: 5.23
NoneNo IPR availablePANTHERPTHR11880:SF837S RIBOSOMAL PROTEIN S19, MITOCHONDRIALcoord: 1..79
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C011310Csa2G382770Cucumber (Chinese Long) v2cumeB117
MELO3C011310CSPI02G24020Wild cucumber (PI 183967)cpimeB118
MELO3C011310Cucsa.162920Cucumber (Gy14) v1cgymeB276
MELO3C011310CsaV3_2G032570Cucumber (Chinese Long) v3cucmeB124
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C011310Wax gourdmewgoB343
MELO3C011310Wax gourdmewgoB370
MELO3C011310Melon (DHL92) v3.5.1memeB129
MELO3C011310Cucumber (Gy14) v1cgymeB453
MELO3C011310Cucurbita maxima (Rimu)cmameB025
MELO3C011310Cucurbita maxima (Rimu)cmameB162
MELO3C011310Cucurbita maxima (Rimu)cmameB725
MELO3C011310Cucurbita moschata (Rifu)cmomeB014
MELO3C011310Cucurbita moschata (Rifu)cmomeB151
MELO3C011310Cucurbita moschata (Rifu)cmomeB716
MELO3C011310Wild cucumber (PI 183967)cpimeB281
MELO3C011310Cucumber (Chinese Long) v2cumeB291
MELO3C011310Watermelon (Charleston Gray)mewcgB288
MELO3C011310Watermelon (Charleston Gray)mewcgB299
MELO3C011310Watermelon (97103) v1mewmB307
MELO3C011310Watermelon (97103) v1mewmB318
MELO3C011310Cucurbita pepo (Zucchini)cpemeB089
MELO3C011310Cucurbita pepo (Zucchini)cpemeB718
MELO3C011310Cucurbita pepo (Zucchini)cpemeB761
MELO3C011310Bottle gourd (USVL1VR-Ls)lsimeB474
MELO3C011310Cucumber (Gy14) v2cgybmeB102
MELO3C011310Cucumber (Gy14) v2cgybmeB243
MELO3C011310Silver-seed gourdcarmeB0143
MELO3C011310Silver-seed gourdcarmeB0629
MELO3C011310Silver-seed gourdcarmeB0955
MELO3C011310Cucumber (Chinese Long) v3cucmeB288
MELO3C011310Watermelon (97103) v2mewmbB306