MELO3C010872.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C010872.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr03 : 30295585 .. 30296345 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCACAAAACAAAACCCCATTCTTCCGTGAAAATTAGCAAATCAGGAACCTCCCTCTCCAAAGAAAAAAAAAAAAATGGCTTTCCGTTCAGTGAACAACCTCCAATTCTGCAAGGATGACATGAGGAGAGCTTACAGAGAGAAAGTTGGGAGTTCAAGAAGAAGGCGTATCAAAATCCGCGACATCATCGACATCTTAGACATCGTCGTACCCATCATCCCCAATTTCTTCGGGAGTAACACTCTCAGTGCCGGTCCCGACAACTACAATAGTTATGGTAATAACCACATGAATGGTGGTTATGGTCGTCGTGACGATGACATGCATTCTTTCCACTGTAGCGGCGGTAGTGGCGGCCGGTTCGGCCTTGACATGGGTTCTGGTGATTATGGGAATGAAAGCATCCACTGCGGTGGACGTGGAAATGGTAATAATCATAATGGTCAGTACGGAATGAGGATGGCTCGTGCTGATGACTATTATGATCGTGAAATAACAGAGGAAGAGTTTGAGAGGCTTCTTGAATTTGCTGAGCAGTGCAATAATAATAATAATTCCAGAATGTACTGATCAAAAAATAATATAAAAATTATAGGTGTGAGACAAAATATAATAACATCAACCCCTCCTCCTTGTAATCCACTACTTCTACTATAATAAAATAAAATAAAATAAAAAATAATGGACTGCCTTGCTACTCCTTTTTGTTTCTTTCTCATACTAAAAAATAAGTTACTTGACGTCCCCCTTTTTTTTTTTTGA

mRNA sequence

TCACAAAACAAAACCCCATTCTTCCGTGAAAATTAGCAAATCAGGAACCTCCCTCTCCAAAGAAAAAAAAAAAAATGGCTTTCCGTTCAGTGAACAACCTCCAATTCTGCAAGGATGACATGAGGAGAGCTTACAGAGAGAAAGTTGGGAGTTCAAGAAGAAGGCGTATCAAAATCCGCGACATCATCGACATCTTAGACATCGTCGTACCCATCATCCCCAATTTCTTCGGGAGTAACACTCTCAGTGCCGGTCCCGACAACTACAATAGTTATGGTAATAACCACATGAATGGTGGTTATGGTCGTCGTGACGATGACATGCATTCTTTCCACTGTAGCGGCGGTAGTGGCGGCCGGTTCGGCCTTGACATGGGTTCTGGTGATTATGGGAATGAAAGCATCCACTGCGGTGGACGTGGAAATGGTAATAATCATAATGGTCAGTACGGAATGAGGATGGCTCGTGCTGATGACTATTATGATCGTGAAATAACAGAGGAAGAGTTTGAGAGGCTTCTTGAATTTGCTGAGCAGTGCAATAATAATAATAATTCCAGAATGTACTGATCAAAAAATAATATAAAAATTATAGGTGTGAGACAAAATATAATAACATCAACCCCTCCTCCTTGTAATCCACTACTTCTACTATAATAAAATAAAATAAAATAAAAAATAATGGACTGCCTTGCTACTCCTTTTTGTTTCTTTCTCATACTAAAAAATAAGTTACTTGACGTCCCCCTTTTTTTTTTTTGA

Coding sequence (CDS)

ATGGCTTTCCGTTCAGTGAACAACCTCCAATTCTGCAAGGATGACATGAGGAGAGCTTACAGAGAGAAAGTTGGGAGTTCAAGAAGAAGGCGTATCAAAATCCGCGACATCATCGACATCTTAGACATCGTCGTACCCATCATCCCCAATTTCTTCGGGAGTAACACTCTCAGTGCCGGTCCCGACAACTACAATAGTTATGGTAATAACCACATGAATGGTGGTTATGGTCGTCGTGACGATGACATGCATTCTTTCCACTGTAGCGGCGGTAGTGGCGGCCGGTTCGGCCTTGACATGGGTTCTGGTGATTATGGGAATGAAAGCATCCACTGCGGTGGACGTGGAAATGGTAATAATCATAATGGTCAGTACGGAATGAGGATGGCTCGTGCTGATGACTATTATGATCGTGAAATAACAGAGGAAGAGTTTGAGAGGCTTCTTGAATTTGCTGAGCAGTGCAATAATAATAATAATTCCAGAATGTACTGA

Protein sequence

MAFRSVNNLQFCKDDMRRAYREKVGSSRRRRIKIRDIIDILDIVVPIIPNFFGSNTLSAGPDNYNSYGNNHMNGGYGRRDDDMHSFHCSGGSGGRFGLDMGSGDYGNESIHCGGRGNGNNHNGQYGMRMARADDYYDREITEEEFERLLEFAEQCNNNNNSRMY
BLAST of MELO3C010872.2 vs. NCBI nr
Match: KGN62520.1 (hypothetical protein Csa_2G359890 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 141/164 (85.98%), Postives = 152/164 (92.68%), Query Frame = 0

Query: 1   MAFRSVNNLQFCKDDMRRAYREKVGSSRRRRIKIRDIIDILDIVVPIIPNFFGSNTLSAG 60
           MAFRSVNNLQF KDDMRRAYREKVGSSRRRRIKIRDIID+L+IV PIIP+FFGSN+LSAG
Sbjct: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60

Query: 61  PDNYNSYGNNHMNGGYGRRDDDMHSFHCSGGSGGRFGLDMGSGDYGNESIHCGGRGNGNN 120
           PDNY++YGNNHMNG YGRRDDDMHSFHC GG GGRFGLDMGSGDYGNES H GGRGNGN+
Sbjct: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHYGGRGNGNS 120

Query: 121 HNGQYGMRMARADDYYDREITEEEFERLLEFAEQCNNNNNSRMY 165
              QYGMRMA A+DYYDREITEEEFERLL+FAEQ ++NNNSRMY
Sbjct: 121 ---QYGMRMALAEDYYDREITEEEFERLLDFAEQ-SHNNNSRMY 160

BLAST of MELO3C010872.2 vs. NCBI nr
Match: XP_023545419.1 (zinc transporter 7-A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545420.1 zinc transporter 7-A-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.9 bits (237), Expect = 1.4e-16
Identity = 70/164 (42.68%), Postives = 88/164 (53.66%), Query Frame = 0

Query: 1   MAFRSVNNLQFCKDDMRRAYREKVGSSRRRRIKIRDIIDILDIVVPIIPNFFGSNTLSAG 60
           MA RSV+NL+ C+DD+   YR     SRR R+KIRDII+I++I+ PIIP FF  +    G
Sbjct: 1   MACRSVDNLR-CRDDLMNVYRANARRSRRGRVKIRDIIEIIEILGPIIPPFFQKH---GG 60

Query: 61  PDNYNSYGNNHMNGGYGRRDDDMHSFHCSGGSGGRFGLDMGSGDYG--------NESIHC 120
            +N++S G+     GY R  DDM         G R G  M SGDYG              
Sbjct: 61  ANNFSSCGSM----GYARDQDDM---------GSRCGFGMSSGDYGXXXXXXXXXXXXXX 120

Query: 121 GGRGNGNNHNGQYGMRMARADDYYDREITEEEFERLLEFAEQCN 157
                        GM M   DDY D EI+EEEFE+LL++AEQCN
Sbjct: 121 XXXXXXXXXXXXXGMSMGHVDDYADHEISEEEFEKLLDYAEQCN 147

BLAST of MELO3C010872.2 vs. NCBI nr
Match: XP_022962401.1 (zinc transporter 7-like [Cucurbita moschata])

HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13
Identity = 65/160 (40.62%), Postives = 84/160 (52.50%), Query Frame = 0

Query: 1   MAFRSVNNLQFCKDDMRRAYREKVGSSRRRRIKIRDIIDILDIVVPIIPNFFGSNTLSAG 60
           MA RSV+NL+ C+DD+   YR     SRR R+KIRDII+I++I+ PIIP+FF  +    G
Sbjct: 1   MACRSVDNLR-CRDDLMNVYRANASRSRRGRVKIRDIIEIIEILGPIIPHFFKKH---GG 60

Query: 61  PDNYNSYGNNHMNGGYGRRDDDMHSFHCSGGSGGRFG----LDMGSGDYGNESIHCGGRG 120
            +N++S G+     GY R  DDM         G RFG                       
Sbjct: 61  ANNFSSCGSM----GYARDQDDM---------GSRFGXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 NGNNHNGQYGMRMARADDYYDREITEEEFERLLEFAEQCN 157
                    GM M   DDY D EI+EEEFE+LL++AEQCN
Sbjct: 121 XXXXXXXXXGMSMGHVDDYADHEISEEEFEKLLDYAEQCN 143

BLAST of MELO3C010872.2 vs. TrEMBL
Match: tr|A0A0A0LKW7|A0A0A0LKW7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359890 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 7.0e-70
Identity = 141/164 (85.98%), Postives = 152/164 (92.68%), Query Frame = 0

Query: 1   MAFRSVNNLQFCKDDMRRAYREKVGSSRRRRIKIRDIIDILDIVVPIIPNFFGSNTLSAG 60
           MAFRSVNNLQF KDDMRRAYREKVGSSRRRRIKIRDIID+L+IV PIIP+FFGSN+LSAG
Sbjct: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60

Query: 61  PDNYNSYGNNHMNGGYGRRDDDMHSFHCSGGSGGRFGLDMGSGDYGNESIHCGGRGNGNN 120
           PDNY++YGNNHMNG YGRRDDDMHSFHC GG GGRFGLDMGSGDYGNES H GGRGNGN+
Sbjct: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHYGGRGNGNS 120

Query: 121 HNGQYGMRMARADDYYDREITEEEFERLLEFAEQCNNNNNSRMY 165
              QYGMRMA A+DYYDREITEEEFERLL+FAEQ ++NNNSRMY
Sbjct: 121 ---QYGMRMALAEDYYDREITEEEFERLLDFAEQ-SHNNNSRMY 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN62520.11.1e-6985.98hypothetical protein Csa_2G359890 [Cucumis sativus][more]
XP_023545419.11.4e-1642.68zinc transporter 7-A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545420.... [more]
XP_022962401.11.1e-1340.63zinc transporter 7-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LKW7|A0A0A0LKW7_CUCSA7.0e-7085.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359890 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010872.2.1MELO3C010872.2.1mRNA


The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010872.2Cucumber (Gy14) v2cgybmedB101
MELO3C010872.2Cucumber (Gy14) v2cgybmedB242
MELO3C010872.2Cucumber (Gy14) v2cgybmedB482
MELO3C010872.2Cucumber (Gy14) v1cgymedB378
MELO3C010872.2Cucumber (Gy14) v1cgymedB387
MELO3C010872.2Cucurbita maxima (Rimu)cmamedB024
MELO3C010872.2Cucurbita maxima (Rimu)cmamedB135
MELO3C010872.2Cucurbita maxima (Rimu)cmamedB170
MELO3C010872.2Cucurbita maxima (Rimu)cmamedB475
MELO3C010872.2Cucurbita maxima (Rimu)cmamedB540
MELO3C010872.2Cucurbita maxima (Rimu)cmamedB821
MELO3C010872.2Cucurbita moschata (Rifu)cmomedB012
MELO3C010872.2Cucurbita moschata (Rifu)cmomedB123
MELO3C010872.2Cucurbita moschata (Rifu)cmomedB161
MELO3C010872.2Cucurbita moschata (Rifu)cmomedB461
MELO3C010872.2Cucurbita moschata (Rifu)cmomedB526
MELO3C010872.2Cucurbita moschata (Rifu)cmomedB815
MELO3C010872.2Cucurbita pepo (Zucchini)cpemedB115
MELO3C010872.2Cucurbita pepo (Zucchini)cpemedB266
MELO3C010872.2Cucurbita pepo (Zucchini)cpemedB605
MELO3C010872.2Cucurbita pepo (Zucchini)cpemedB746
MELO3C010872.2Cucurbita pepo (Zucchini)cpemedB852
MELO3C010872.2Cucurbita pepo (Zucchini)cpemedB890
MELO3C010872.2Wild cucumber (PI 183967)cpimedB276
MELO3C010872.2Wild cucumber (PI 183967)cpimedB542
MELO3C010872.2Cucumber (Chinese Long) v2cumedB275
MELO3C010872.2Cucumber (Chinese Long) v2cumedB526
MELO3C010872.2Melon (DHL92) v3.6.1medmedB080
MELO3C010872.2Melon (DHL92) v3.6.1medmedB124
MELO3C010872.2Bottle gourd (USVL1VR-Ls)lsimedB271
MELO3C010872.2Bottle gourd (USVL1VR-Ls)lsimedB315
MELO3C010872.2Watermelon (Charleston Gray)medwcgB278
MELO3C010872.2Watermelon (Charleston Gray)medwcgB272
MELO3C010872.2Watermelon (Charleston Gray)medwcgB288
MELO3C010872.2Watermelon (97103) v1medwmB295
MELO3C010872.2Watermelon (97103) v1medwmB311
MELO3C010872.2Watermelon (97103) v1medwmB323
MELO3C010872.2Silver-seed gourdcarmedB0190
MELO3C010872.2Silver-seed gourdcarmedB0779
MELO3C010872.2Cucumber (Chinese Long) v3cucmedB280
MELO3C010872.2Watermelon (97103) v2medwmbB277
MELO3C010872.2Wax gourdmedwgoB370