MELO3C010867.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C010867.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Description40S ribosomal protein S13-like
Locationchr03 : 30318306 .. 30318719 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCGTATGCACAGTAGTGGTAAGGGTATTTCCGCCTCTGCATTGCCCTACAAGAGGATGCCACCAAGTTGGCTCAAGATCTCTTCTACGGATGTTGAAGATAATATCTGCAAATTTGCGAAGAAGGGCTTAACCCCTTCTCAAATTGGTGTGATTCTCACGGGATTGCCCAGGTCAAAAGTGTTACCGGAAACAAAATATTGCGTATTCAAGGTCCATGGACTTGCACCTGAGATTCCAGAGGATCTCTATCACTTAATCAAGAAAGCAGTTTCCATCCGTAAGCATTTGGAGAGGAACAGGAAGGACAAAGACTCCAAGTTCAGATTGATTCTCGTGGAGAGCAGAATTCACAGACTTGCTCGTTACTATAAGAACTCTCCTACCCTAAACCATAAAATAATTAATTGA

mRNA sequence

ATGGGTCGTATGCACAGTAGTGGTAAGGGTATTTCCGCCTCTGCATTGCCCTACAAGAGGATGCCACCAAGTTGGCTCAAGATCTCTTCTACGGATGTTGAAGATAATATCTGCAAATTTGCGAAGAAGGGCTTAACCCCTTCTCAAATTGGTGTGATTCTCACGGGATTGCCCAGGTCAAAAGTGTTACCGGAAACAAAATATTGCGTATTCAAGGTCCATGGACTTGCACCTGAGATTCCAGAGGATCTCTATCACTTAATCAAGAAAGCAGTTTCCATCCGTAAGCATTTGGAGAGGAACAGGAAGGACAAAGACTCCAAGTTCAGATTGATTCTCGTGGAGAGCAGAATTCACAGACTTGCTCGTTACTATAAGAACTCTCCTACCCTAAACCATAAAATAATTAATTGA

Coding sequence (CDS)

ATGGGTCGTATGCACAGTAGTGGTAAGGGTATTTCCGCCTCTGCATTGCCCTACAAGAGGATGCCACCAAGTTGGCTCAAGATCTCTTCTACGGATGTTGAAGATAATATCTGCAAATTTGCGAAGAAGGGCTTAACCCCTTCTCAAATTGGTGTGATTCTCACGGGATTGCCCAGGTCAAAAGTGTTACCGGAAACAAAATATTGCGTATTCAAGGTCCATGGACTTGCACCTGAGATTCCAGAGGATCTCTATCACTTAATCAAGAAAGCAGTTTCCATCCGTAAGCATTTGGAGAGGAACAGGAAGGACAAAGACTCCAAGTTCAGATTGATTCTCGTGGAGAGCAGAATTCACAGACTTGCTCGTTACTATAAGAACTCTCCTACCCTAAACCATAAAATAATTAATTGA

Protein sequence

MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILTGLPRSKVLPETKYCVFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKNSPTLNHKIIN
Homology
[Close]
BLAST of MELO3C010867.2 vs. NCBI nr
Match: XP_004147576.1 (PREDICTED: 40S ribosomal protein S13 [Cucumis sativus] >XP_008437146.1 PREDICTED: 40S ribosomal protein S13-like [Cucumis melo] >KGN50199.1 hypothetical protein Csa_5G158550 [Cucumis sativus])

HSP 1 Score: 211.1 bits (536), Expect = 2.4e-51
Identity = 110/135 (81.48%), Postives = 115/135 (85.19%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR PPSWLKISSTDVEDNICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            + K +   K   + K HGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. NCBI nr
Match: XP_022157239.1 (40S ribosomal protein S13-like [Momordica charantia])

HSP 1 Score: 210.3 bits (534), Expect = 4.1e-51
Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR PPSWLKISSTDV+DNICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSTDVDDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            + K +  +K   + K HGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. NCBI nr
Match: XP_022958210.1 (40S ribosomal protein S13-like [Cucurbita moschata] >XP_022922396.1 40S ribosomal protein S13-like [Cucurbita moschata] >XP_022996440.1 40S ribosomal protein S13-like [Cucurbita maxima] >XP_022970202.1 40S ribosomal protein S13-like [Cucurbita maxima] >XP_023534749.1 40S ribosomal protein S13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.3 bits (534), Expect = 4.1e-51
Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR PPSWLKISSTDVEDNICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            + + +  +K   + K HGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVRSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. NCBI nr
Match: XP_006421743.1 (40S ribosomal protein S13 [Citrus clementina] >XP_006445274.1 40S ribosomal protein S13 [Citrus clementina] >XP_006490240.1 40S ribosomal protein S13 [Citrus sinensis] >XP_006490912.1 40S ribosomal protein S13 [Citrus sinensis] >XP_012489762.1 PREDICTED: 40S ribosomal protein S13 isoform X1 [Gossypium raimondii] >XP_017616110.1 PREDICTED: 40S ribosomal protein S13-like [Gossypium arboreum] >XP_021668549.1 40S ribosomal protein S13 [Hevea brasiliensis] >XP_022765760.1 40S ribosomal protein S13-like [Durio zibethinus] >ESR34983.1 hypothetical protein CICLE_v10006145mg [Citrus clementina] >ESR58514.1 hypothetical protein CICLE_v10022677mg [Citrus clementina] >KDO65399.1 hypothetical protein CISIN_1g031857mg [Citrus sinensis] >KJB41102.1 hypothetical protein B456_007G090600 [Gossypium raimondii] >PIN07142.1 40S ribosomal protein S13 [Handroanthus impetiginosus] >GAY41352.1 hypothetical protein CUMW_058810 [Citrus unshiu])

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-50
Identity = 108/135 (80.00%), Postives = 115/135 (85.19%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR PPSWLKISS DVEDNICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            + K +  +K   + K HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. NCBI nr
Match: XP_012489763.1 (PREDICTED: 40S ribosomal protein S13 isoform X2 [Gossypium raimondii] >ESR34982.1 hypothetical protein CICLE_v10006145mg [Citrus clementina] >KDO65400.1 hypothetical protein CISIN_1g031857mg [Citrus sinensis] >KHG30159.1 40S ribosomal S13 [Gossypium arboreum] >KJB41103.1 hypothetical protein B456_007G090600 [Gossypium raimondii] >KJB41104.1 hypothetical protein B456_007G090600 [Gossypium raimondii] >KJB41105.1 hypothetical protein B456_007G090600 [Gossypium raimondii] >GAY41353.1 hypothetical protein CUMW_058810 [Citrus unshiu])

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-50
Identity = 108/135 (80.00%), Postives = 115/135 (85.19%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR PPSWLKISS DVEDNICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            + K +  +K   + K HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. TAIR10
Match: AT4G00100.1 (ribosomal protein S13A)

HSP 1 Score: 200.3 bits (508), Expect = 7.7e-52
Identity = 103/135 (76.30%), Postives = 114/135 (84.44%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR  PSWLK +S DV+++ICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           P+ K +  +K   + K HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. TAIR10
Match: AT3G60770.1 (Ribosomal protein S13/S15)

HSP 1 Score: 198.4 bits (503), Expect = 2.9e-51
Identity = 102/135 (75.56%), Postives = 113/135 (83.70%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR  PSWLK +  DV+++ICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           P+ K +  +K   + K HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. Swiss-Prot
Match: sp|P62302|RS13_SOYBN (40S ribosomal protein S13 OS=Glycine max OX=3847 GN=RPS13 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 7.4e-52
Identity = 106/135 (78.52%), Postives = 114/135 (84.44%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGIS+SALPYKR PPSWLKISS DVE+NICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            +   +  +K   + K HGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. Swiss-Prot
Match: sp|P59224|RS132_ARATH (40S ribosomal protein S13-2 OS=Arabidopsis thaliana OX=3702 GN=RPS13B PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-50
Identity = 103/135 (76.30%), Postives = 114/135 (84.44%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR  PSWLK +S DV+++ICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           P+ K +  +K   + K HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. Swiss-Prot
Match: sp|P59223|RS131_ARATH (40S ribosomal protein S13-1 OS=Arabidopsis thaliana OX=3702 GN=RPS13A PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 5.3e-50
Identity = 102/135 (75.56%), Postives = 113/135 (83.70%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR  PSWLK +  DV+++ICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           P+ K +  +K   + K HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. Swiss-Prot
Match: sp|P46298|RS13_PEA (40S ribosomal protein S13 OS=Pisum sativum OX=3888 GN=RPS13 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 7.7e-49
Identity = 101/135 (74.81%), Postives = 112/135 (82.96%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGR+HS GKGIS+SALPY+R  PSWLKISS DV++ ICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRLHSKGKGISSSALPYRRTAPSWLKISSQDVDETICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            + K +  +K   + K HGLAPEIPEDLYHLIKKAVSIRKHLER RKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERFRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. Swiss-Prot
Match: sp|Q69UI1|RS132_ORYSJ (40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0117300 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 4.7e-46
Identity = 97/135 (71.85%), Postives = 109/135 (80.74%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGIS+SALPYKR PPSWLK +++DVE+ I K AKKG  PSQIGV+L    G+
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKTAASDVEEMIMKAAKKGQMPSQIGVVLRDQHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
           P  K +  +K   + K HGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKRTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. TrEMBL
Match: tr|A0A1S3ATA6|A0A1S3ATA6_CUCME (40S ribosomal protein S13-like OS=Cucumis melo OX=3656 GN=LOC103482656 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 110/135 (81.48%), Postives = 115/135 (85.19%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR PPSWLKISSTDVEDNICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            + K +   K   + K HGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. TrEMBL
Match: tr|A0A0A0KMS8|A0A0A0KMS8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G158550 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 110/135 (81.48%), Postives = 115/135 (85.19%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR PPSWLKISSTDVEDNICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            + K +   K   + K HGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. TrEMBL
Match: tr|V4RLB2|V4RLB2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10006145mg PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-50
Identity = 108/135 (80.00%), Postives = 115/135 (85.19%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR PPSWLKISS DVEDNICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            + K +  +K   + K HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. TrEMBL
Match: tr|A0A0D2S9Y5|A0A0D2S9Y5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G090600 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-50
Identity = 108/135 (80.00%), Postives = 115/135 (85.19%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR PPSWLKISS DVEDNICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            + K +  +K   + K HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

[Close]
BLAST of MELO3C010867.2 vs. TrEMBL
Match: tr|V4S3U3|V4S3U3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10006145mg PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-50
Identity = 108/135 (80.00%), Postives = 115/135 (85.19%), Query Frame = 0 

Query: 1   MGRMHSSGKGISASALPYKRMPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILT---GL 60
           MGRMHS GKGISASALPYKR PPSWLKISS DVEDNICKFAKKGLTPSQIGVIL    G+
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 61  PRSKVLPETKYC-VFKVHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120
            + K +  +K   + K HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 121 RIHRLARYYKNSPTL 132
           RIHRLARYYK +  L
Sbjct: 121 RIHRLARYYKKTKKL 135

The following BLAST results are available for this feature:
BLAST of MELO3C010867.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147576.12.4e-5181.48PREDICTED: 40S ribosomal protein S13 [Cucumis sativus] >XP_008437146.1 PREDICTED... [more]
XP_022157239.14.1e-5180.7440S ribosomal protein S13-like [Momordica charantia][more]
XP_022958210.14.1e-5180.7440S ribosomal protein S13-like [Cucurbita moschata] >XP_022922396.1 40S ribosoma... [more]
XP_006421743.12.0e-5080.0040S ribosomal protein S13 [Citrus clementina] >XP_006445274.1 40S ribosomal prot... [more]
XP_012489763.12.0e-5080.00PREDICTED: 40S ribosomal protein S13 isoform X2 [Gossypium raimondii] >ESR34982.... [more]
BLAST of MELO3C010867.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00100.17.7e-5276.30ribosomal protein S13A[more]
AT3G60770.12.9e-5175.56Ribosomal protein S13/S15[more]
BLAST of MELO3C010867.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P62302|RS13_SOYBN7.4e-5278.5240S ribosomal protein S13 OS=Glycine max OX=3847 GN=RPS13 PE=2 SV=1[more]
sp|P59224|RS132_ARATH1.4e-5076.3040S ribosomal protein S13-2 OS=Arabidopsis thaliana OX=3702 GN=RPS13B PE=2 SV=1[more]
sp|P59223|RS131_ARATH5.3e-5075.5640S ribosomal protein S13-1 OS=Arabidopsis thaliana OX=3702 GN=RPS13A PE=2 SV=1[more]
sp|P46298|RS13_PEA7.7e-4974.8140S ribosomal protein S13 OS=Pisum sativum OX=3888 GN=RPS13 PE=2 SV=1[more]
sp|Q69UI1|RS132_ORYSJ4.7e-4671.8540S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g011... [more]
BLAST of MELO3C010867.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3ATA6|A0A1S3ATA6_CUCME1.6e-5181.4840S ribosomal protein S13-like OS=Cucumis melo OX=3656 GN=LOC103482656 PE=3 SV=1[more]
tr|A0A0A0KMS8|A0A0A0KMS8_CUCSA1.6e-5181.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G158550 PE=3 SV=1[more]
tr|V4RLB2|V4RLB2_9ROSI1.4e-5080.00Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10006145mg PE=3 ... [more]
tr|A0A0D2S9Y5|A0A0D2S9Y5_GOSRA1.4e-5080.00Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G090600 PE=3 ... [more]
tr|V4S3U3|V4S3U3_9ROSI1.4e-5080.00Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10006145mg PE=3 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR009068S15_NS1_RNA-bd
IPR023029Ribosomal_S15P
IPR012606Ribosomal_S13/S15_N
IPR000589Ribosomal_S15
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010867.2.1MELO3C010867.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 67..134
e-value: 1.3E-6
score: 32.5
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 75..128
e-value: 1.3E-13
score: 50.9
IPR000589Ribosomal protein S15PROSITEPS00362RIBOSOMAL_S15coord: 94..124
IPR000589Ribosomal protein S15CDDcd00353Ribosomal_S15p_S13ecoord: 70..127
e-value: 1.52833E-19
score: 77.1582
IPR012606Ribosomal protein S13/S15, N-terminalSMARTSM01386Ribosomal_S13_N_2coord: 1..57
e-value: 3.0E-27
score: 106.5
IPR012606Ribosomal protein S13/S15, N-terminalPFAMPF08069Ribosomal_S13_Ncoord: 1..54
e-value: 3.6E-26
score: 90.9
NoneNo IPR availableGENE3DG3DSA:1.10.287.10coord: 79..135
e-value: 2.3E-28
score: 100.0
NoneNo IPR availableGENE3DG3DSA:1.10.8.1030coord: 35..78
e-value: 2.1E-8
score: 35.8
NoneNo IPR availablePANTHERPTHR11885:SF13SUBFAMILY NOT NAMEDcoord: 1..132
IPR023029Ribosomal protein S15PPANTHERPTHR11885RIBOSOMAL PROTEIN S15P/S13Ecoord: 1..132
IPR009068S15/NS1, RNA-bindingSUPERFAMILYSSF47060S15/NS1 RNA-binding domaincoord: 63..130

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010867.2Cucumber (Gy14) v2cgybmedB101
MELO3C010867.2Cucumber (Gy14) v2cgybmedB242
MELO3C010867.2Cucumber (Gy14) v2cgybmedB482
MELO3C010867.2Cucumber (Gy14) v1cgymedB378
MELO3C010867.2Cucumber (Gy14) v1cgymedB387
MELO3C010867.2Cucurbita maxima (Rimu)cmamedB024
MELO3C010867.2Cucurbita maxima (Rimu)cmamedB135
MELO3C010867.2Cucurbita maxima (Rimu)cmamedB170
MELO3C010867.2Cucurbita maxima (Rimu)cmamedB475
MELO3C010867.2Cucurbita maxima (Rimu)cmamedB540
MELO3C010867.2Cucurbita maxima (Rimu)cmamedB821
MELO3C010867.2Cucurbita moschata (Rifu)cmomedB012
MELO3C010867.2Cucurbita moschata (Rifu)cmomedB123
MELO3C010867.2Cucurbita moschata (Rifu)cmomedB161
MELO3C010867.2Cucurbita moschata (Rifu)cmomedB461
MELO3C010867.2Cucurbita moschata (Rifu)cmomedB526
MELO3C010867.2Cucurbita moschata (Rifu)cmomedB815
MELO3C010867.2Cucurbita pepo (Zucchini)cpemedB115
MELO3C010867.2Cucurbita pepo (Zucchini)cpemedB266
MELO3C010867.2Cucurbita pepo (Zucchini)cpemedB605
MELO3C010867.2Cucurbita pepo (Zucchini)cpemedB746
MELO3C010867.2Cucurbita pepo (Zucchini)cpemedB852
MELO3C010867.2Cucurbita pepo (Zucchini)cpemedB890
MELO3C010867.2Wild cucumber (PI 183967)cpimedB114
MELO3C010867.2Wild cucumber (PI 183967)cpimedB276
MELO3C010867.2Wild cucumber (PI 183967)cpimedB542
MELO3C010867.2Cucumber (Chinese Long) v2cumedB114
MELO3C010867.2Cucumber (Chinese Long) v2cumedB275
MELO3C010867.2Cucumber (Chinese Long) v2cumedB526
MELO3C010867.2Melon (DHL92) v3.6.1medmedB080
MELO3C010867.2Melon (DHL92) v3.6.1medmedB124
MELO3C010867.2Bottle gourd (USVL1VR-Ls)lsimedB271
MELO3C010867.2Bottle gourd (USVL1VR-Ls)lsimedB315
MELO3C010867.2Watermelon (Charleston Gray)medwcgB278
MELO3C010867.2Bottle gourd (USVL1VR-Ls)lsimedB489
MELO3C010867.2Watermelon (Charleston Gray)medwcgB272
MELO3C010867.2Watermelon (Charleston Gray)medwcgB288
MELO3C010867.2Watermelon (97103) v1medwmB295
MELO3C010867.2Watermelon (97103) v1medwmB311
MELO3C010867.2Watermelon (97103) v1medwmB323
MELO3C010867.2Silver-seed gourdcarmedB0190
MELO3C010867.2Silver-seed gourdcarmedB0779
MELO3C010867.2Cucumber (Chinese Long) v3cucmedB118
MELO3C010867.2Cucumber (Chinese Long) v3cucmedB280
MELO3C010867.2Watermelon (97103) v2medwmbB277
MELO3C010867.2Watermelon (97103) v2medwmbB289
MELO3C010867.2Wax gourdmedwgoB321
MELO3C010867.2Wax gourdmedwgoB370