MELO3C010485 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C010485
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionGeranylgeranylglyceryl phosphate synthase
Locationchr7 : 8266858 .. 8267078 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGATGCAAGCGTAACCAATAATGTGATGGATCCTGAAGTGGCTAAGCGACTAGGCCTCAAGATAACGAGGAGAAGTGACACTGAGATAAAGATCATCAGTGCCAAACCATTGAGGAATATTGGACGGGCTTGGGATATCAAGACAAGGGTAGGAGGATGGCAAGGTGAGCTCGATTTCCTCATAGCACCTCTTAATGATTATAAGATAGTCATAGG

mRNA sequence

ATGTTAGATGCAAGCGTAACCAATAATGTGATGGATCCTGAAGTGGCTAAGCGACTAGGCCTCAAGATAACGAGGAGAAGTGACACTGAGATAAAGATCATCAGTGCCAAACCATTGAGGAATATTGGACGGGCTTGGGATATCAAGACAAGGGTAGGAGGATGGCAAGGTGAGCTCGATTTCCTCATAGCACCTCTTAATGATTATAAGATAGTCATAGG

Coding sequence (CDS)

ATGTTAGATGCAAGCGTAACCAATAATGTGATGGATCCTGAAGTGGCTAAGCGACTAGGCCTCAAGATAACGAGGAGAAGTGACACTGAGATAAAGATCATCAGTGCCAAACCATTGAGGAATATTGGACGGGCTTGGGATATCAAGACAAGGGTAGGAGGATGGCAAGGTGAGCTCGATTTCCTCATAGCACCTCTTAATGATTATAAGATAGTCATAGG

Protein sequence

MLDASVTNNVMDPEVAKRLGLKITRRSDTEIKIISAKPLRNIGRAWDIKTRVGGWQGELDFLIAPLNDYKIVI
Homology
[Close]
BLAST of MELO3C010485 vs. TrEMBL
Match: A0A0J8C6S6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g146600 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.5e-06
Identity = 27/73 (36.99%), Postives = 46/73 (63.01%), Query Frame = 1 

Query: 1   MLDASVTNNVMDPEVAKRLGLKITRRSDTEIKIISAKPLRNIGRAWDIKTRVGGWQGELD 60
           ++D   T+N +    AK LG+K T+  D E+K I++      GRAW++  R+G W+G++D
Sbjct: 207 LVDTGATHNFLALREAKNLGVKFTK-VDGEMKAINSGATPVYGRAWNVPVRLGKWRGKID 266

Query: 61  FLIAPLNDYKIVI 74
           FL+  ++D  IV+
Sbjct: 267 FLVVDMDDESIVL 278

[Close]
BLAST of MELO3C010485 vs. NCBI nr
Match: gi|802760765|ref|XP_012089545.1| (PREDICTED: uncharacterized protein LOC105647934, partial [Jatropha curcas])

HSP 1 Score: 62.8 bits (151), Expect = 2.9e-07
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1 

Query: 1   MLDASVTNNVMDPEVAKRLGLKITRRSDTEIKIISAKPLRNIGRAWDIKTRVGGWQGELD 60
           MLD   T+N MD E AKRLGL I   S T +K ++AK    +G A  +  ++G W G+LD
Sbjct: 240 MLDTGATDNFMDVEEAKRLGLNIVGGSGT-VKTVNAKEKPIMGFAKAVTVKIGSWCGKLD 299

Query: 61  FLIAPLNDYKIVI 74
           F + P++D+ IV+
Sbjct: 300 FTVVPMDDFDIVL 311

[Close]
BLAST of MELO3C010485 vs. NCBI nr
Match: gi|1011994000|ref|XP_015949562.1| (PREDICTED: uncharacterized protein LOC107474456 [Arachis duranensis])

HSP 1 Score: 62.4 bits (150), Expect = 3.8e-07
Identity = 32/75 (42.67%), Postives = 51/75 (68.00%), Query Frame = 1 

Query: 1   MLDASVTNNVMDPEVAKRLGLKITRRSDTEIKIISAK--PLRNIGRAWDIKTRVGGWQGE 60
           M+D   T+N + P+ AKRLGLKIT ++    K ++ K  PL+ + +   ++T +G W+G 
Sbjct: 246 MIDIGATHNFITPDEAKRLGLKITEKNGW-FKPVNTKGEPLKGVAKG--VETTLGSWKGL 305

Query: 61  LDFLIAPLNDYKIVI 74
           LDF +AP++D+KIVI
Sbjct: 306 LDFSVAPMDDFKIVI 317

[Close]
BLAST of MELO3C010485 vs. NCBI nr
Match: gi|848907649|ref|XP_012852904.1| (PREDICTED: uncharacterized protein LOC105972488 [Erythranthe guttata])

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-06
Identity = 30/73 (41.10%), Postives = 49/73 (67.12%), Query Frame = 1 

Query: 1   MLDASVTNNVMDPEVAKRLGLKITRRSDTEIKIISAKPLRNIGRAWDIKTRVGGWQGELD 60
           M+D   T+N +  E AKR+GL+ TRR D  +K ++AK     G A D +  +G W+G++D
Sbjct: 441 MVDTGATHNFITEEEAKRVGLRWTRR-DGWLKAVNAKTQPLNGVARDAELHLGTWKGQVD 500

Query: 61  FLIAPLNDYKIVI 74
           F +AP++D+K+V+
Sbjct: 501 FSVAPMDDFKVVL 512

[Close]
BLAST of MELO3C010485 vs. NCBI nr
Match: gi|848917350|ref|XP_012856097.1| (PREDICTED: uncharacterized protein LOC105975443 [Erythranthe guttata])

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-06
Identity = 29/73 (39.73%), Postives = 49/73 (67.12%), Query Frame = 1 

Query: 1   MLDASVTNNVMDPEVAKRLGLKITRRSDTEIKIISAKPLRNIGRAWDIKTRVGGWQGELD 60
           M+D   T+N +  + AKR+GL+ TRR D  +K ++AK     G A D +  +G W+G++D
Sbjct: 441 MVDTGATHNFITEDEAKRVGLRWTRR-DGWLKAVNAKAQPLNGVARDAELHLGTWKGQVD 500

Query: 61  FLIAPLNDYKIVI 74
           F +AP++D+K+V+
Sbjct: 501 FSVAPMDDFKVVL 512

[Close]
BLAST of MELO3C010485 vs. NCBI nr
Match: gi|848890497|ref|XP_012845381.1| (PREDICTED: uncharacterized protein LOC105965384 [Erythranthe guttata])

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-06
Identity = 29/73 (39.73%), Postives = 49/73 (67.12%), Query Frame = 1 

Query: 1   MLDASVTNNVMDPEVAKRLGLKITRRSDTEIKIISAKPLRNIGRAWDIKTRVGGWQGELD 60
           M+D   T+N +  + AKR+GL+ TRR D  +K ++AK     G A D +  +G W+G++D
Sbjct: 425 MVDTGATHNFITEDEAKRVGLRWTRR-DGWLKAVNAKAQPLNGVARDAELHLGTWKGQVD 484

Query: 61  FLIAPLNDYKIVI 74
           F +AP++D+K+V+
Sbjct: 485 FSVAPMDDFKVVL 496

The following BLAST results are available for this feature:
BLAST of MELO3C010485 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0J8C6S6_BETVU6.5e-0636.99Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g146600 PE=4 S... [more]
BLAST of MELO3C010485 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|802760765|ref|XP_012089545.1|2.9e-0743.84PREDICTED: uncharacterized protein LOC105647934, partial [Jatropha curcas][more]
gi|1011994000|ref|XP_015949562.1|3.8e-0742.67PREDICTED: uncharacterized protein LOC107474456 [Arachis duranensis][more]
gi|848907649|ref|XP_012852904.1|1.1e-0641.10PREDICTED: uncharacterized protein LOC105972488 [Erythranthe guttata][more]
gi|848917350|ref|XP_012856097.1|2.5e-0639.73PREDICTED: uncharacterized protein LOC105975443 [Erythranthe guttata][more]
gi|848890497|ref|XP_012845381.1|2.5e-0639.73PREDICTED: uncharacterized protein LOC105965384 [Erythranthe guttata][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010485T1MELO3C010485T1mRNA