MELO3C010408 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C010408
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionATPase synthesis protein 25, mitochondrial
Locationchr7 : 10080349 .. 10080660 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGATGATGCCAACATTTGGAGCAGGATATTGTGATTTTGAGGTCGGTACAGGATATTGTGATGCAGGGATCGGTCCATTATCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACACGGACGTGGCTATGAGGAACATAACAAATATCTGTATCATGAAGCATCTGCAGATATATCAGATCAACAAGAGTACCAACAAAAACAAGAGAACCAAGAGAACCGAGAACAACATAGAGTTCAGAGTCGACGTCGACAACCAGCCCGAAATCGACGACGTCCGGGTTGTGGAACACATTGA

mRNA sequence

ATGACGATGATGCCAACATTTGGAGCAGGATATTGTGATTTTGAGGTCGGTACAGGATATTGTGATGCAGGGATCGGTCCATTATCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACACGGACGTGGCTATGAGGAACATAACAAATATCTGTATCATGAAGCATCTGCAGATATATCAGATCAACAAGAGTACCAACAAAAACAAGAGAACCAAGAGAACCGAGAACAACATAGAGTTCAGAGTCGACGTCGACAACCAGCCCGAAATCGACGACGTCCGGGTTGTGGAACACATTGA

Coding sequence (CDS)

ATGACGATGATGCCAACATTTGGAGCAGGATATTGTGATTTTGAGGTCGGTACAGGATATTGTGATGCAGGGATCGGTCCATTATCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACACGGACGTGGCTATGAGGAACATAACAAATATCTGTATCATGAAGCATCTGCAGATATATCAGATCAACAAGAGTACCAACAAAAACAAGAGAACCAAGAGAACCGAGAACAACATAGAGTTCAGAGTCGACGTCGACAACCAGCCCGAAATCGACGACGTCCGGGTTGTGGAACACATTGA

Protein sequence

MTMMPTFGAGYCDFEVGTGYCDAGIGPLSSYMDVGPSTSYMHGHGRGYEEHNKYLYHEASADISDQQEYQQKQENQENREQHRVQSRRRQPARNRRRPGCGTH*
Homology
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BLAST of MELO3C010408 vs. NCBI nr
Match: gi|659069376|ref|XP_008449513.1| (PREDICTED: GATA zinc finger domain-containing protein 10-like [Cucumis melo])

HSP 1 Score: 105.1 bits (261), Expect = 7.3e-20
Identity = 63/129 (48.84%), Postives = 77/129 (59.69%), Query Frame = 1 

Query: 3   MMPTFGAGYCDFEVGT------GYCDAGIGPLSS-----YMDVG--PSTSYMHGHGRGYE 62
           MMPTFG  Y D  VG       GY ++  G  S+     Y D+G  PS+SYMHGHGRG  
Sbjct: 136 MMPTFGMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRG 195

Query: 63  EHNKYLYHEASADISDQQEYQQKQEN------------QENRE---QHRVQSRRRQPARN 104
           EHN+YLY++  A + +Q + QQ+QEN            QEN E   Q RVQ RRRQ A+N
Sbjct: 196 EHNEYLYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQQQRVQIRRRQLAKN 255

The following BLAST results are available for this feature:
BLAST of MELO3C010408 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069376|ref|XP_008449513.1|7.3e-2048.84PREDICTED: GATA zinc finger domain-containing protein 10-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010408T1MELO3C010408T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010408Wax gourdmewgoB593
MELO3C010408Cucurbita maxima (Rimu)cmameB246
MELO3C010408Cucurbita moschata (Rifu)cmomeB234
MELO3C010408Wild cucumber (PI 183967)cpimeB292
MELO3C010408Cucumber (Chinese Long) v2cumeB298
MELO3C010408Watermelon (Charleston Gray)mewcgB491
MELO3C010408Watermelon (97103) v1mewmB520
MELO3C010408Cucurbita pepo (Zucchini)cpemeB590
MELO3C010408Cucumber (Gy14) v2cgybmeB253
MELO3C010408Silver-seed gourdcarmeB0333
MELO3C010408Cucumber (Chinese Long) v3cucmeB298