MELO3C010392 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C010392
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUPF0261 protein
Locationchr7 : 10465933 .. 10466476 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGTGACAGTTCCCGCTTTGATGCCATTATAGAGAAGAGGATCCCATTAGTTCTAAGTGTAGGAGCAGTGGATATGGTAAANNNNNNNNNNNNNNNNNNNNAAGGCTACTGCTACTCTTATAGAGGAACTACAGAAAGCTATTCAGTTAAATAATGATAGGCAGGTACTCGTAAAGTTATTATTATCGAGTTCCTCTCTTTGTTGACTGATCCCCATCTTTGTGTTGTAAAGCTTAAACCTCTTTATGATACAGGTGAAGGTATATCCTTATCATATTAATGATCCTGAGTTCGCTGAGGAATTGGTTAACTCATTCTTGGAAATTACTCCAAAAGATACGGACTCGTGTGGCCCAAAACTTGTTTTAGCTGAAACTAGTCAAGACCTTCGAAAGATGGGGCAGTTTTGCATGGCTGGAAGGGGTTCTTTAGCAGGTTTGCTACCTTTTGCCGATGCTAATGCCATAGTGCTTGAAATGGCCAATGAAGTATTGCCTGTAAGTTCTATCTTCTATGTACCTGCTGATTCACAAAGTTAA

mRNA sequence

ATGGCTTGTGACAGTTCCCGCTTTGATGCCATTATAGAGAAGAGGATCCCATTAGTTCTAAGTGTAGGAGCAGTGGATATGGTGAAGGTATATCCTTATCATATTAATGATCCTGAGTTCGCTGAGGAATTGGTTAACTCATTCTTGGAAATTACTCCAAAAGATACGGACTCGTGTGGCCCAAAACTTGTTTTAGCTGAAACTAGTCAAGACCTTCGAAAGATGGGGCAGTTTTGCATGGCTGGAAGGGGTTCTTTAGCAGGTTTGCTACCTTTTGCCGATGCTAATGCCATAGTGCTTGAAATGGCCAATGAAGTATTGCCTGTAAGTTCTATCTTCTATGTACCTGCTGATTCACAAAGTTAA

Coding sequence (CDS)

ATGGCTTGTGACAGTTCCCGCTTTGATGCCATTATAGAGAAGAGGATCCCATTAGTTCTAAGTGTAGGAGCAGTGGATATGGTGAAGGTATATCCTTATCATATTAATGATCCTGAGTTCGCTGAGGAATTGGTTAACTCATTCTTGGAAATTACTCCAAAAGATACGGACTCGTGTGGCCCAAAACTTGTTTTAGCTGAAACTAGTCAAGACCTTCGAAAGATGGGGCAGTTTTGCATGGCTGGAAGGGGTTCTTTAGCAGGTTTGCTACCTTTTGCCGATGCTAATGCCATAGTGCTTGAAATGGCCAATGAAGTATTGCCTGTAAGTTCTATCTTCTATGTACCTGCTGATTCACAAAGTTAA

Protein sequence

MACDSSRFDAIIEKRIPLVLSVGAVDMVKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVSSIFYVPADSQS*
Homology
[Close]
BLAST of MELO3C010392 vs. TrEMBL
Match: A0A0A0KGJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504420 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.0e-16
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 1 

Query: 28  VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK 75
           VKVYPYHINDPEFAE LVNSFLEIT KDTDSCGPKLVLAETS+DLRK
Sbjct: 370 VKVYPYHINDPEFAEVLVNSFLEITSKDTDSCGPKLVLAETSRDLRK 416

[Close]
BLAST of MELO3C010392 vs. TrEMBL
Match: A0A0A0KGJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504420 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-07
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 1 

Query: 76  GQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV 110
           G+F MAGRGSLAGLLPFADANAIVLEMANEVLPV
Sbjct: 493 GRFRMAGRGSLAGLLPFADANAIVLEMANEVLPV 526


HSP 2 Score: 54.7 bits (130), Expect = 9.2e-05
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 1 

Query: 1   MACDSSRFDAIIEKRIPLVLSVGAVDMV 29
           MACDS+RFDAIIEK+IPLVLSVGAVDMV
Sbjct: 282 MACDSTRFDAIIEKKIPLVLSVGAVDMV 309


HSP 3 Score: 67.4 bits (163), Expect = 1.4e-08
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 1 

Query: 72  LRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVSS 112
           L   G+F MAGRGSLAGLLPFADANA+VLEMANEVLPVSS
Sbjct: 519 LYNSGRFRMAGRGSLAGLLPFADANAVVLEMANEVLPVSS 558

[Close]
BLAST of MELO3C010392 vs. TrEMBL
Match: V4RVP9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024970mg PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.5e-04
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 1 

Query: 1   MACDSSRFDAIIEKRIPLVLSVGAVDMV 29
           MACDSSRFDA IEK+IPLVLSVGA+DMV
Sbjct: 280 MACDSSRFDATIEKKIPLVLSVGALDMV 307


HSP 2 Score: 42.4 bits (98), Expect = 4.7e-01
Identity = 19/28 (67.86%), Postives = 25/28 (89.29%), Query Frame = 1 

Query: 28  VKVYPYHINDPEFAEELVNSFLEITPKD 56
           VKVYP++IND EFA+ LV+SFLEI+ K+
Sbjct: 403 VKVYPHNINDSEFADALVDSFLEISGKN 430


HSP 3 Score: 66.2 bits (160), Expect = 3.1e-08
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 1 

Query: 72  LRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVS 111
           L   G+F MAGRGSLAGLLPFADANAIVLEMANEVLPVS
Sbjct: 522 LYNSGRFRMAGRGSLAGLLPFADANAIVLEMANEVLPVS 560

[Close]
BLAST of MELO3C010392 vs. TrEMBL
Match: A0A0D2TIE6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G201200 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.6e-07
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 1 

Query: 28  VKVYPYHINDPEFAEELVNSFLEITPKD-TDSCGPKLVLAETSQDLRKMGQFCMAGRGSL 87
           VK+YPYHINDPEFA+ LV+SF+EI  K+ TDS  P++   E+SQDL+K     ++   S 
Sbjct: 402 VKMYPYHINDPEFAKALVDSFMEICSKNPTDSSLPQVASCESSQDLQKGHDHNVS--SSS 461

Query: 88  AGLLPFADAN 97
           +G L ++ +N
Sbjct: 462 SGTLTYSPSN 469


HSP 2 Score: 53.1 bits (126), Expect = 2.7e-04
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 1 

Query: 1   MACDSSRFDAIIEKRIPLVLSVGAVDMV 29
           MACDSSRFD IIEK+IPLVLSVGA+DMV
Sbjct: 279 MACDSSRFDVIIEKKIPLVLSVGALDMV 306


HSP 3 Score: 64.7 bits (156), Expect = 8.9e-08
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 1 

Query: 72  LRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV 110
           L   G+F MAGRGSLAGLLPFADANAIVLEMANEVLPV
Sbjct: 513 LYNSGRFRMAGRGSLAGLLPFADANAIVLEMANEVLPV 550

[Close]
BLAST of MELO3C010392 vs. TrEMBL
Match: A0A0E0HDX2_ORYNI (Uncharacterized protein OS=Oryza nivara PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-04
Identity = 30/85 (35.29%), Postives = 48/85 (56.47%), Query Frame = 1 

Query: 28  VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRKMGQFCMAGRGSLA 87
           VK+ PYHINDPEFA  LV++FL +  K +++  P+  + +T+QD+    ++C   R S +
Sbjct: 393 VKMLPYHINDPEFANVLVDAFLSMDVKASNTISPENSMVQTNQDVNTK-EYCSTQRTSDS 452

Query: 88  GLL-----PFADANAIVLEMANEVL 108
            ++      F DA    L+    VL
Sbjct: 453 SIIWRSPVDFPDARPETLQKTKSVL 476


HSP 2 Score: 49.7 bits (117), Expect = 3.0e-03
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 1 

Query: 1   MACDSSRFDAIIEKRIPLVLSVGAVDMVKVYPYHINDPEF 41
           MACD +RFDAII+ +IPLVLSVGA+DMV         P+F
Sbjct: 270 MACDDTRFDAIIDNKIPLVLSVGALDMVNFGARDTIPPDF 309


HSP 3 Score: 64.7 bits (156), Expect = 8.9e-08
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 1 

Query: 72  LRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV 110
           L   G+F MAGRGSLAGLLPFADANAIVLEMANEVLPV
Sbjct: 522 LYNSGRFRMAGRGSLAGLLPFADANAIVLEMANEVLPV 559

[Close]
BLAST of MELO3C010392 vs. TAIR10
Match: AT5G66420.2 (AT5G66420.2 LOCATED IN: cellular_component unknown)

HSP 1 Score: 63.9 bits (154), Expect = 7.7e-11
Identity = 31/34 (91.18%), Postives = 31/34 (91.18%), Query Frame = 1 

Query: 76  GQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV 110
           G+F MAGRGSLAGLLPFADANA+VLEMANEVLPV
Sbjct: 527 GRFRMAGRGSLAGLLPFADANAVVLEMANEVLPV 560


HSP 2 Score: 49.3 bits (116), Expect = 2.0e-06
Identity = 24/28 (85.71%), Postives = 23/28 (82.14%), Query Frame = 1 

Query: 1   MACDSSRFDAIIEKRIPLVLSVGAVDMV 29
           MACDSSRFD  IEK IPLVLSVGA+DMV
Sbjct: 283 MACDSSRFDITIEKGIPLVLSVGALDMV 310


HSP 3 Score: 45.8 bits (107), Expect = 2.2e-05
Identity = 25/52 (48.08%), Postives = 29/52 (55.77%), Query Frame = 1 

Query: 3   CDSSRFDAIIEKRIPLVLSVGAVDMVKVYPYHINDPEFAEELVNSFLEITPK 55
           CD     A+I +   L+        V +Y +HINDPEFAE LV SFLEI PK
Sbjct: 382 CDPEATGALINELQGLI-QTNDDRQVNIYSHHINDPEFAEALVASFLEICPK 432

[Close]
BLAST of MELO3C010392 vs. NCBI nr
Match: gi|659081054|ref|XP_008441125.1| (PREDICTED: uncharacterized protein LOC103485354 [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19
Identity = 66/109 (60.55%), Postives = 73/109 (66.97%), Query Frame = 1 

Query: 1   MACDSSRFDAIIEKRIPLVLSVGAVDMVKVYPYHINDPEFAEELVNSFLEITPKDTDSCG 60
           MACDS+RFDAIIEKRIPLVLSVGAVDM      H   P        +  EI+ K  +  G
Sbjct: 281 MACDSTRFDAIIEKRIPLVLSVGAVDMKA--QIHKEVPIIG---AGAGTEISAKFEEDGG 340

Query: 61  PKLVLAETSQDLRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV 110
             L++   S      G+F MAGRGSLAGLLPFADANAIVLEMANEVLPV
Sbjct: 341 VDLIVVYNS------GRFRMAGRGSLAGLLPFADANAIVLEMANEVLPV 378

[Close]
BLAST of MELO3C010392 vs. NCBI nr
Match: gi|449464548|ref|XP_004149991.1| (PREDICTED: uncharacterized protein LOC101205995 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 5.7e-16
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 1 

Query: 28  VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK 75
           VKVYPYHINDPEFAE LVNSFLEIT KDTDSCGPKLVLAETS+DLRK
Sbjct: 405 VKVYPYHINDPEFAEVLVNSFLEITSKDTDSCGPKLVLAETSRDLRK 451

[Close]
BLAST of MELO3C010392 vs. NCBI nr
Match: gi|449464548|ref|XP_004149991.1| (PREDICTED: uncharacterized protein LOC101205995 [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-07
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 1 

Query: 76  GQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV 110
           G+F MAGRGSLAGLLPFADANAIVLEMANEVLPV
Sbjct: 528 GRFRMAGRGSLAGLLPFADANAIVLEMANEVLPV 561


HSP 2 Score: 54.7 bits (130), Expect = 1.3e-04
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 1 

Query: 1   MACDSSRFDAIIEKRIPLVLSVGAVDMV 29
           MACDS+RFDAIIEK+IPLVLSVGAVDMV
Sbjct: 282 MACDSTRFDAIIEKKIPLVLSVGAVDMV 309


HSP 3 Score: 92.4 bits (228), Expect = 5.7e-16
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 1 

Query: 28  VKVYPYHINDPEFAEELVNSFLEITPKDTDSCGPKLVLAETSQDLRK 75
           VKVYPYHINDPEFAE LVNSFLEIT KDTDSCGPKLVLAETS+DLRK
Sbjct: 370 VKVYPYHINDPEFAEVLVNSFLEITSKDTDSCGPKLVLAETSRDLRK 416

[Close]
BLAST of MELO3C010392 vs. NCBI nr
Match: gi|700193656|gb|KGN48860.1| (hypothetical protein Csa_6G504420 [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-07
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 1 

Query: 76  GQFCMAGRGSLAGLLPFADANAIVLEMANEVLPV 110
           G+F MAGRGSLAGLLPFADANAIVLEMANEVLPV
Sbjct: 493 GRFRMAGRGSLAGLLPFADANAIVLEMANEVLPV 526


HSP 2 Score: 54.7 bits (130), Expect = 1.3e-04
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 1 

Query: 1   MACDSSRFDAIIEKRIPLVLSVGAVDMV 29
           MACDS+RFDAIIEK+IPLVLSVGAVDMV
Sbjct: 282 MACDSTRFDAIIEKKIPLVLSVGAVDMV 309


HSP 3 Score: 67.4 bits (163), Expect = 2.0e-08
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 1 

Query: 72  LRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVSS 112
           L   G+F MAGRGSLAGLLPFADANA+VLEMANEVLPVSS
Sbjct: 519 LYNSGRFRMAGRGSLAGLLPFADANAVVLEMANEVLPVSS 558

[Close]
BLAST of MELO3C010392 vs. NCBI nr
Match: gi|567866011|ref|XP_006425628.1| (hypothetical protein CICLE_v10024970mg [Citrus clementina])

HSP 1 Score: 52.8 bits (125), Expect = 5.0e-04
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 1 

Query: 1   MACDSSRFDAIIEKRIPLVLSVGAVDMV 29
           MACDSSRFDA IEK+IPLVLSVGA+DMV
Sbjct: 280 MACDSSRFDATIEKKIPLVLSVGALDMV 307


HSP 2 Score: 42.4 bits (98), Expect = 6.8e-01
Identity = 19/28 (67.86%), Postives = 25/28 (89.29%), Query Frame = 1 

Query: 28  VKVYPYHINDPEFAEELVNSFLEITPKD 56
           VKVYP++IND EFA+ LV+SFLEI+ K+
Sbjct: 403 VKVYPHNINDSEFADALVDSFLEISGKN 430


HSP 3 Score: 66.2 bits (160), Expect = 4.4e-08
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 1 

Query: 72  LRKMGQFCMAGRGSLAGLLPFADANAIVLEMANEVLPVS 111
           L   G+F MAGRGSLAGLLPFADANAIVLEMANEVLPVS
Sbjct: 522 LYNSGRFRMAGRGSLAGLLPFADANAIVLEMANEVLPVS 560

The following BLAST results are available for this feature:
BLAST of MELO3C010392 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGJ3_CUCSA4.0e-1693.62Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504420 PE=4 SV=1[more]
A0A0A0KGJ3_CUCSA1.2e-0794.12Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504420 PE=4 SV=1[more]
V4RVP9_9ROSI3.5e-0489.29Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024970mg PE=4 SV=1[more]
A0A0D2TIE6_GOSRA7.6e-0748.57Uncharacterized protein OS=Gossypium raimondii GN=B456_007G201200 PE=4 SV=1[more]
A0A0E0HDX2_ORYNI2.1e-0435.29Uncharacterized protein OS=Oryza nivara PE=4 SV=1[more]
BLAST of MELO3C010392 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G66420.27.7e-1191.18 LOCATED IN: cellular_component unknown[more]
BLAST of MELO3C010392 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081054|ref|XP_008441125.1|1.1e-1960.55PREDICTED: uncharacterized protein LOC103485354 [Cucumis melo][more]
gi|449464548|ref|XP_004149991.1|5.7e-1693.62PREDICTED: uncharacterized protein LOC101205995 [Cucumis sativus][more]
gi|449464548|ref|XP_004149991.1|1.7e-0794.12PREDICTED: uncharacterized protein LOC101205995 [Cucumis sativus][more]
gi|700193656|gb|KGN48860.1|1.7e-0794.12hypothetical protein Csa_6G504420 [Cucumis sativus][more]
gi|567866011|ref|XP_006425628.1|5.0e-0489.29hypothetical protein CICLE_v10024970mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008322UPF0261
IPR009215TIM-br_IGPS-like
IPR013785Aldolase_TIM
IPR015813Pyrv/PenolPyrv_Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010392T1MELO3C010392T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008322Uncharacterised protein family UPF0261PFAMPF06792UPF0261coord: 1..31
score: 2.
IPR009215TIM-barrel domain, IGPS-likePFAMPF09370PEP_hydrolasecoord: 75..110
score: 1.3
IPR013785Aldolase-type TIM barrelGENE3DG3DSA:3.20.20.70coord: 75..110
score: 7.9
IPR015813Pyruvate/Phosphoenolpyruvate kinase-like domainunknownSSF51621Phosphoenolpyruvate/pyruvate domaincoord: 75..111
score: 3.4
NoneNo IPR availablePANTHERPTHR31862FAMILY NOT NAMEDcoord: 1..28
score: 7.6
NoneNo IPR availablePANTHERPTHR31862:SF0SUBFAMILY NOT NAMEDcoord: 1..28
score: 7.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010392Watermelon (97103) v2mewmbB495
MELO3C010392Wax gourdmewgoB584
MELO3C010392Cucurbita maxima (Rimu)cmameB246
MELO3C010392Cucurbita maxima (Rimu)cmameB435
MELO3C010392Cucurbita moschata (Rifu)cmomeB234
MELO3C010392Cucurbita moschata (Rifu)cmomeB426
MELO3C010392Wild cucumber (PI 183967)cpimeB313
MELO3C010392Cucumber (Chinese Long) v2cumeB316
MELO3C010392Watermelon (Charleston Gray)mewcgB489
MELO3C010392Watermelon (97103) v1mewmB519
MELO3C010392Cucurbita pepo (Zucchini)cpemeB541
MELO3C010392Cucurbita pepo (Zucchini)cpemeB590
MELO3C010392Bottle gourd (USVL1VR-Ls)lsimeB448
MELO3C010392Cucumber (Gy14) v2cgybmeB272
MELO3C010392Silver-seed gourdcarmeB0333
MELO3C010392Silver-seed gourdcarmeB0759