MELO3C010365.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C010365.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionprotein MNN4-like
Locationchr07 : 11706546 .. 11706836 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCAAGGCAAAGAGAACTCCAAGCGAGGATATTTATGAGAAATTTGAGAAGAAGTTGGAAGAATTAAGTCCACTTGAGGATGAAGTAGTGAAACCTTCAAAGACAAAAAGGAAGGTTACAATCAAGAAGCAAGTTTTGAGGGAGCAATTCACCAAAAAGCGAGAAGAAAATGAAAAGAGAGGTCCTAGGAATGAAGAAGTTCAAGAAGAAAAAAAAAAGGGGACCAAGAAGGTGAAACAGAGGAGCTCTCTGCAAACAACTCTAGATAGAGAATGGGCTCTATTCATTTAA

mRNA sequence

GGCAAGGCAAAGAGAACTCCAAGCGAGGATATTTATGAGAAATTTGAGAAGAAGTTGGAAGAATTAAGTCCACTTGAGGATGAAGTAGTGAAACCTTCAAAGACAAAAAGGAAGGTTACAATCAAGAAGCAAGTTTTGAGGGAGCAATTCACCAAAAAGCGAGAAGAAAATGAAAAGAGAGGTCCTAGGAATGAAGAAGTTCAAGAAGAAAAAAAAAAGGGGACCAAGAAGGTGAAACAGAGGAGCTCTCTGCAAACAACTCTAGATAGAGAATGGGCTCTATTCATTTAA

Coding sequence (CDS)

GGCAAGGCAAAGAGAACTCCAAGCGAGGATATTTATGAGAAATTTGAGAAGAAGTTGGAAGAATTAAGTCCACTTGAGGATGAAGTAGTGAAACCTTCAAAGACAAAAAGGAAGGTTACAATCAAGAAGCAAGTTTTGAGGGAGCAATTCACCAAAAAGCGAGAAGAAAATGAAAAGAGAGGTCCTAGGAATGAAGAAGTTCAAGAAGAAAAAAAAAAGGGGACCAAGAAGGTGAAACAGAGGAGCTCTCTGCAAACAACTCTAGATAGAGAATGGGCTCTATTCATTTAA

Protein sequence

GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTKKREENEKRGPRNEEVQEEKKKGTKKVKQRSSLQTTLDREWALFI
Homology
[Close]
BLAST of MELO3C010365.2 vs. NCBI nr
Match: KGN44432.1 (hypothetical protein Csa_7G290550 [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 2.6e-07
Identity = 34/50 (68.00%), Postives = 43/50 (86.00%), Query Frame = 0 

Query: 1  GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQF 51
          GK ++TPSE+I E+FE+KLE+LSPLEDEVVKP   K+KVT+KK VL+ QF
Sbjct: 37 GKVRKTPSEEICEEFERKLEDLSPLEDEVVKP--LKKKVTVKKSVLKXQF 84

[Close]
BLAST of MELO3C010365.2 vs. NCBI nr
Match: KGN44458.1 (hypothetical protein Csa_7G298750 [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 2.8e-06
Identity = 32/46 (69.57%), Postives = 41/46 (89.13%), Query Frame = 0 

Query: 7  PSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTK 53
          P E+I+E+FE+KLE+LSPLEDEVVKP K K+KVT+ K+VL+EQF K
Sbjct: 4  PIEEIFEEFERKLEDLSPLEDEVVKPLK-KKKVTVNKKVLKEQFVK 48

[Close]
BLAST of MELO3C010365.2 vs. TrEMBL
Match: tr|A0A0A0K7W9|A0A0A0K7W9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-07
Identity = 34/50 (68.00%), Postives = 43/50 (86.00%), Query Frame = 0 

Query: 1  GKAKRTPSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQF 51
          GK ++TPSE+I E+FE+KLE+LSPLEDEVVKP   K+KVT+KK VL+ QF
Sbjct: 37 GKVRKTPSEEICEEFERKLEDLSPLEDEVVKP--LKKKVTVKKSVLKXQF 84

[Close]
BLAST of MELO3C010365.2 vs. TrEMBL
Match: tr|A0A0A0K4R7|A0A0A0K4R7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298750 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-06
Identity = 32/46 (69.57%), Postives = 41/46 (89.13%), Query Frame = 0 

Query: 7  PSEDIYEKFEKKLEELSPLEDEVVKPSKTKRKVTIKKQVLREQFTK 53
          P E+I+E+FE+KLE+LSPLEDEVVKP K K+KVT+ K+VL+EQF K
Sbjct: 4  PIEEIFEEFERKLEDLSPLEDEVVKPLK-KKKVTVNKKVLKEQFVK 48

The following BLAST results are available for this feature:
BLAST of MELO3C010365.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44432.12.6e-0768.00hypothetical protein Csa_7G290550 [Cucumis sativus][more]
KGN44458.12.8e-0669.57hypothetical protein Csa_7G298750 [Cucumis sativus][more]
BLAST of MELO3C010365.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C010365.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C010365.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K7W9|A0A0A0K7W9_CUCSA1.7e-0768.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G290550 PE=4 SV=1[more]
tr|A0A0A0K4R7|A0A0A0K4R7_CUCSA1.9e-0669.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298750 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010365.2.1MELO3C010365.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..76

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010365.2Cucumber (Chinese Long) v3cucmedB080
MELO3C010365.2Cucumber (Chinese Long) v3cucmedB310
MELO3C010365.2Watermelon (97103) v2medwmbB472
MELO3C010365.2Watermelon (97103) v2medwmbB486
MELO3C010365.2Wax gourdmedwgoB598
MELO3C010365.2Cucumber (Gy14) v2cgybmedB067
MELO3C010365.2Cucumber (Gy14) v2cgybmedB269
MELO3C010365.2Cucumber (Gy14) v1cgymedB162
MELO3C010365.2Cucumber (Gy14) v1cgymedB302
MELO3C010365.2Cucurbita maxima (Rimu)cmamedB232
MELO3C010365.2Cucurbita maxima (Rimu)cmamedB280
MELO3C010365.2Cucurbita maxima (Rimu)cmamedB502
MELO3C010365.2Cucurbita moschata (Rifu)cmomedB216
MELO3C010365.2Cucurbita moschata (Rifu)cmomedB266
MELO3C010365.2Cucurbita moschata (Rifu)cmomedB490
MELO3C010365.2Cucurbita pepo (Zucchini)cpemedB570
MELO3C010365.2Cucurbita pepo (Zucchini)cpemedB641
MELO3C010365.2Cucurbita pepo (Zucchini)cpemedB700
MELO3C010365.2Wild cucumber (PI 183967)cpimedB071
MELO3C010365.2Wild cucumber (PI 183967)cpimedB304
MELO3C010365.2Cucumber (Chinese Long) v2cumedB073
MELO3C010365.2Cucumber (Chinese Long) v2cumedB300
MELO3C010365.2Melon (DHL92) v3.6.1medmedB073
MELO3C010365.2Bottle gourd (USVL1VR-Ls)lsimedB236
MELO3C010365.2Bottle gourd (USVL1VR-Ls)lsimedB466
MELO3C010365.2Watermelon (Charleston Gray)medwcgB483
MELO3C010365.2Watermelon (Charleston Gray)medwcgB468
MELO3C010365.2Watermelon (97103) v1medwmB502
MELO3C010365.2Watermelon (97103) v1medwmB521