MELO3C010306.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C010306.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Universal stress protein A-like protein
Location	chr02 : 16747776 .. 16748027 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGATCGTGGCCGTCGACGGCAACGAGAGAGCACAGACACTTTACGGTGGGCATTTCAAAATCTCAAGCTCCACTCATCGGGATCGGATTCCACCGACAGAACTTTTGTTGTGCTTCATGTTCAGCCTCCTCCTTTGATCGTCACTGGTCTCAGTCCTGCTCCAATCCCCTTTGGTGGTCCTAGCGATCTAGAGGTTCTTGCTTTCCTTGAGTCGCATCAGAGAGGCGGATTACAACTGCGATACTGA

mRNA sequence

ATGCTTGATCGTGGCCGTCGACGGCAACGAGAGAGCACAGACACTTTACGGTGGGCATTTCAAAATCTCAAGCTCCACTCATCGGGATCGGATTCCACCGACAGAACTTTTGTTGTGCTTCATGTTCAGCCTCCTCCTTTGATCGTCACTGGTCTCAGTCCTGCTCCAATCCCCTTTGGTGGTCCTAGCGATCTAGAGGTTCTTGCTTTCCTTGAGTCGCATCAGAGAGGCGGATTACAACTGCGATACTGA

Coding sequence (CDS)

ATGCTTGATCGTGGCCGTCGACGGCAACGAGAGAGCACAGACACTTTACGGTGGGCATTTCAAAATCTCAAGCTCCACTCATCGGGATCGGATTCCACCGACAGAACTTTTGTTGTGCTTCATGTTCAGCCTCCTCCTTTGATCGTCACTGGTCTCAGTCCTGCTCCAATCCCCTTTGGTGGTCCTAGCGATCTAGAGGTTCTTGCTTTCCTTGAGTCGCATCAGAGAGGCGGATTACAACTGCGATACTGA

Protein sequence

MLDRGRRRQRESTDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAFLESHQRGGLQLRY

Homology

[Close]

BLAST of MELO3C010306.2 vs. NCBI nr
Match: XP_008444941.1 (PREDICTED: universal stress protein Sll1388 [Cucumis melo] >XP_008444943.1 PREDICTED: universal stress protein Sll1388 [Cucumis melo] >XP_008444944.1 PREDICTED: universal stress protein Sll1388 [Cucumis melo] >XP_008444945.1 PREDICTED: universal stress protein Sll1388 [Cucumis melo])

HSP 1 Score: 109.8 bits (273), Expect = 4.6e-21
Identity = 56/69 (81.16%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAF 70
          ES D LRWAFQNLKL SSG DSTD TFVVLHVQPPP I  GLSPAPIPFGGPSDLEV AF
Sbjct: 17 ESMDALRWAFQNLKLCSSGPDSTDGTFVVLHVQPPPSIAAGLSPAPIPFGGPSDLEVPAF 76

Query: 71 ---LESHQR 77
             +ESHQR
Sbjct: 77 TAAIESHQR 85

[Close]

BLAST of MELO3C010306.2 vs. NCBI nr
Match: XP_004148419.1 (PREDICTED: uncharacterized protein LOC101203754 [Cucumis sativus] >XP_011649699.1 PREDICTED: uncharacterized protein LOC101203754 [Cucumis sativus] >KGN62760.1 hypothetical protein Csa_2G371090 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 5.6e-19
Identity = 52/69 (75.36%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAF 70
          ES   LRWA QNLKLHSS  DSTD TFV LHVQPPP I  GLSP PIPFGGPSDLEV AF
Sbjct: 17 ESMGALRWALQNLKLHSSSPDSTDGTFVALHVQPPPSIAAGLSPDPIPFGGPSDLEVPAF 76

Query: 71 ---LESHQR 77
             +ESHQR
Sbjct: 77 TAAIESHQR 85

[Close]

BLAST of MELO3C010306.2 vs. NCBI nr
Match: XP_023547229.1 (universal stress protein PHOS34 [Cucurbita pepo subsp. pepo] >XP_023547230.1 universal stress protein PHOS34 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 102.8 bits (255), Expect = 5.6e-19
Identity = 52/69 (75.36%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAF 70
          ES   LRWAF+NLKL SS  DSTD TFVVLHVQPPP I  GLSP PIPFGGPSDLEV AF
Sbjct: 17 ESMGALRWAFENLKLRSSTPDSTDGTFVVLHVQPPPTIAAGLSPGPIPFGGPSDLEVPAF 76

Query: 71 ---LESHQR 77
             +ESHQR
Sbjct: 77 TAAIESHQR 85

[Close]

BLAST of MELO3C010306.2 vs. NCBI nr
Match: XP_022961627.1 (universal stress protein PHOS34-like [Cucurbita moschata] >XP_022961628.1 universal stress protein PHOS34-like [Cucurbita moschata])

HSP 1 Score: 101.3 bits (251), Expect = 1.6e-18
Identity = 50/69 (72.46%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAF 70
          ES   LRWAF+NLKL SS  DS D TF+VLHVQPPP I  GLSP PIPFGGPSDLEV AF
Sbjct: 17 ESMGALRWAFENLKLRSSAPDSNDGTFIVLHVQPPPTIAAGLSPGPIPFGGPSDLEVPAF 76

Query: 71 ---LESHQR 77
             +ESHQR
Sbjct: 77 TAAIESHQR 85

[Close]

BLAST of MELO3C010306.2 vs. NCBI nr
Match: XP_022997274.1 (universal stress protein PHOS34 [Cucurbita maxima] >XP_022997275.1 universal stress protein PHOS34 [Cucurbita maxima])

HSP 1 Score: 100.9 bits (250), Expect = 2.1e-18
Identity = 51/69 (73.91%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAF 70
          ES   LRWAF+NLKL SS   STD TFVVLHVQPPP I  GLSP PIPFGGPSDLEV AF
Sbjct: 17 ESMGALRWAFENLKLRSSAPGSTDGTFVVLHVQPPPTIAAGLSPGPIPFGGPSDLEVPAF 76

Query: 71 ---LESHQR 77
             +ESHQR
Sbjct: 77 TAAIESHQR 85

[Close]

BLAST of MELO3C010306.2 vs. TAIR10
Match: AT1G09740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 77.4 bits (189), Expect = 4.6e-15
Identity = 41/68 (60.29%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 12 STDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAF- 71
          S + LRWA  NLKL SS SDS   +FVVLHVQP P +  G+SP  IPFGGPS LEV AF 
Sbjct: 20 SMEALRWALDNLKLSSSSSDS---SFVVLHVQPSPSVAAGVSPGTIPFGGPSGLEVPAFT 79

Query: 72 --LESHQR 77
            +E HQ+
Sbjct: 80 AAIEQHQK 84

[Close]

BLAST of MELO3C010306.2 vs. TrEMBL
Match: tr|A0A1S3BBJ3|A0A1S3BBJ3_CUCME (universal stress protein Sll1388 OS=Cucumis melo OX=3656 GN=LOC103488134 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.0e-21
Identity = 56/69 (81.16%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAF 70
          ES D LRWAFQNLKL SSG DSTD TFVVLHVQPPP I  GLSPAPIPFGGPSDLEV AF
Sbjct: 17 ESMDALRWAFQNLKLCSSGPDSTDGTFVVLHVQPPPSIAAGLSPAPIPFGGPSDLEVPAF 76

Query: 71 ---LESHQR 77
             +ESHQR
Sbjct: 77 TAAIESHQR 85

[Close]

BLAST of MELO3C010306.2 vs. TrEMBL
Match: tr|A0A0A0LLD9|A0A0A0LLD9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G371090 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.7e-19
Identity = 52/69 (75.36%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAF 70
          ES   LRWA QNLKLHSS  DSTD TFV LHVQPPP I  GLSP PIPFGGPSDLEV AF
Sbjct: 17 ESMGALRWALQNLKLHSSSPDSTDGTFVALHVQPPPSIAAGLSPDPIPFGGPSDLEVPAF 76

Query: 71 ---LESHQR 77
             +ESHQR
Sbjct: 77 TAAIESHQR 85

[Close]

BLAST of MELO3C010306.2 vs. TrEMBL
Match: tr|G7KBJ5|G7KBJ5_MEDTR (Adenine nucleotide alpha hydrolase superfamily protein OS=Medicago truncatula OX=3880 GN=11427412 PE=4 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-14
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDR-TFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLA 70
          ES + LRWA +NLKL S   DSTD  +F++LHVQ PP I TGL+P  IPFGGPSDLEV A
Sbjct: 19 ESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGGPSDLEVPA 78

Query: 71 F---LESHQR 77
          F   +E+HQ+
Sbjct: 79 FAAAIEAHQK 88

[Close]

BLAST of MELO3C010306.2 vs. TrEMBL
Match: tr|B7FH01|B7FH01_MEDTR (Adenine nucleotide alpha hydrolase superfamily protein OS=Medicago truncatula OX=3880 GN=11427412 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-14
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDR-TFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLA 70
          ES + LRWA +NLKL S   DSTD  +F++LHVQ PP I TGL+P  IPFGGPSDLEV A
Sbjct: 19 ESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGGPSDLEVPA 78

Query: 71 F---LESHQR 77
          F   +E+HQ+
Sbjct: 79 FAAAIEAHQK 88

[Close]

BLAST of MELO3C010306.2 vs. TrEMBL
Match: tr|G7KBJ3|G7KBJ3_MEDTR (Adenine nucleotide alpha hydrolase superfamily protein OS=Medicago truncatula OX=3880 GN=11427412 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.1e-14
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDR-TFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLA 70
          ES + LRWA +NLKL S   DSTD  +F++LHVQ PP I TGL+P  IPFGGPSDLEV A
Sbjct: 19 ESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGGPSDLEVPA 78

Query: 71 F---LESHQR 77
          F   +E+HQ+
Sbjct: 79 FAAAIEAHQK 88

The following BLAST results are available for this feature:

BLAST of MELO3C010306.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444941.1	4.6e-21	81.16	PREDICTED: universal stress protein Sll1388 [Cucumis melo] >XP_008444943.1 PREDI...	[more]
XP_004148419.1	5.6e-19	75.36	PREDICTED: uncharacterized protein LOC101203754 [Cucumis sativus] >XP_011649699....	[more]
XP_023547229.1	5.6e-19	75.36	universal stress protein PHOS34 [Cucurbita pepo subsp. pepo] >XP_023547230.1 uni...	[more]
XP_022961627.1	1.6e-18	72.46	universal stress protein PHOS34-like [Cucurbita moschata] >XP_022961628.1 univer...	[more]
XP_022997274.1	2.1e-18	73.91	universal stress protein PHOS34 [Cucurbita maxima] >XP_022997275.1 universal str...	[more]

BLAST of MELO3C010306.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09740.1	4.6e-15	60.29	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]

BLAST of MELO3C010306.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C010306.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BBJ3\|A0A1S3BBJ3_CUCME	3.0e-21	81.16	universal stress protein Sll1388 OS=Cucumis melo OX=3656 GN=LOC103488134 PE=4 SV...	[more]
tr\|A0A0A0LLD9\|A0A0A0LLD9_CUCSA	3.7e-19	75.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G371090 PE=4 SV=1	[more]
tr\|G7KBJ5\|G7KBJ5_MEDTR	6.1e-14	61.43	Adenine nucleotide alpha hydrolase superfamily protein OS=Medicago truncatula OX...	[more]
tr\|B7FH01\|B7FH01_MEDTR	6.1e-14	61.43	Adenine nucleotide alpha hydrolase superfamily protein OS=Medicago truncatula OX...	[more]
tr\|G7KBJ3\|G7KBJ3_MEDTR	6.1e-14	61.43	Adenine nucleotide alpha hydrolase superfamily protein OS=Medicago truncatula OX...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010306.2.1	MELO3C010306.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31964:SF2	ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE PROTEIN	coord: 11..73
None	No IPR available	PANTHER	PTHR31964	FAMILY NOT NAMED	coord: 11..73

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C010306.2	Cucumber (Gy14) v2	cgybmedB045
MELO3C010306.2	Cucumber (Gy14) v2	cgybmedB092
MELO3C010306.2	Cucumber (Gy14) v2	cgybmedB162
MELO3C010306.2	Cucumber (Gy14) v1	cgymedB210
MELO3C010306.2	Cucumber (Gy14) v1	cgymedB416
MELO3C010306.2	Cucumber (Gy14) v1	cgymedB511
MELO3C010306.2	Cucurbita maxima (Rimu)	cmamedB023
MELO3C010306.2	Cucurbita maxima (Rimu)	cmamedB060
MELO3C010306.2	Cucurbita maxima (Rimu)	cmamedB112
MELO3C010306.2	Cucurbita maxima (Rimu)	cmamedB469
MELO3C010306.2	Cucurbita maxima (Rimu)	cmamedB811
MELO3C010306.2	Cucurbita moschata (Rifu)	cmomedB011
MELO3C010306.2	Cucurbita moschata (Rifu)	cmomedB052
MELO3C010306.2	Cucurbita moschata (Rifu)	cmomedB105
MELO3C010306.2	Cucurbita moschata (Rifu)	cmomedB806
MELO3C010306.2	Cucurbita pepo (Zucchini)	cpemedB104
MELO3C010306.2	Cucurbita pepo (Zucchini)	cpemedB392
MELO3C010306.2	Cucurbita pepo (Zucchini)	cpemedB604
MELO3C010306.2	Cucurbita pepo (Zucchini)	cpemedB734
MELO3C010306.2	Cucurbita pepo (Zucchini)	cpemedB851
MELO3C010306.2	Wild cucumber (PI 183967)	cpimedB042
MELO3C010306.2	Wild cucumber (PI 183967)	cpimedB105
MELO3C010306.2	Wild cucumber (PI 183967)	cpimedB181
MELO3C010306.2	Cucumber (Chinese Long) v2	cumedB038
MELO3C010306.2	Cucumber (Chinese Long) v2	cumedB182
MELO3C010306.2	Melon (DHL92) v3.6.1	medmedB102
MELO3C010306.2	Bottle gourd (USVL1VR-Ls)	lsimedB108
MELO3C010306.2	Bottle gourd (USVL1VR-Ls)	lsimedB309
MELO3C010306.2	Bottle gourd (USVL1VR-Ls)	lsimedB425
MELO3C010306.2	Watermelon (Charleston Gray)	medwcgB221
MELO3C010306.2	Watermelon (Charleston Gray)	medwcgB242
MELO3C010306.2	Watermelon (Charleston Gray)	medwcgB249
MELO3C010306.2	Watermelon (97103) v1	medwmB268
MELO3C010306.2	Watermelon (97103) v1	medwmB277
MELO3C010306.2	Watermelon (97103) v1	medwmB288
MELO3C010306.2	Silver-seed gourd	carmedB0135
MELO3C010306.2	Silver-seed gourd	carmedB0636
MELO3C010306.2	Silver-seed gourd	carmedB0675
MELO3C010306.2	Cucumber (Chinese Long) v3	cucmedB052
MELO3C010306.2	Cucumber (Chinese Long) v3	cucmedB110
MELO3C010306.2	Cucumber (Chinese Long) v3	cucmedB185
MELO3C010306.2	Watermelon (97103) v2	medwmbB225
MELO3C010306.2	Watermelon (97103) v2	medwmbB242
MELO3C010306.2	Watermelon (97103) v2	medwmbB251
MELO3C010306.2	Wax gourd	medwgoB268
MELO3C010306.2	Wax gourd	medwgoB286
MELO3C010306.2	Wax gourd	medwgoB290