MELO3C010306 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C010306
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Adenine nucleotide alpha hydrolases-like protein
Location	chr2 : 15945261 .. 15945512 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGATCGTGGCCGTCGACGGCAACGAGAGAGCACAGACACTTTACGGTGGGCATTTCAAAATCTCAAGCTCCACTCATCGGGATCGGATTCCACCGACAGAACTTTTGTTGTGCTTCATGTTCAGCCTCCTCCTTTGATCGTCACTGGTCTCAGTCCTGCTCCAATCCCCTTTGGTGGTCCTAGCGATCTAGAGGTTCTTGCTTTCCTTGAGTCGCATCAGAGAGGCGGATTACAACTGCGATACTGA

mRNA sequence

ATGCTTGATCGTGGCCGTCGACGGCAACGAGAGAGCACAGACACTTTACGGTGGGCATTTCAAAATCTCAAGCTCCACTCATCGGGATCGGATTCCACCGACAGAACTTTTGTTGTGCTTCATGTTCAGCCTCCTCCTTTGATCGTCACTGGTCTCAGTCCTGCTCCAATCCCCTTTGGTGGTCCTAGCGATCTAGAGGTTCTTGCTTTCCTTGAGTCGCATCAGAGAGGCGGATTACAACTGCGATACTGA

Coding sequence (CDS)

ATGCTTGATCGTGGCCGTCGACGGCAACGAGAGAGCACAGACACTTTACGGTGGGCATTTCAAAATCTCAAGCTCCACTCATCGGGATCGGATTCCACCGACAGAACTTTTGTTGTGCTTCATGTTCAGCCTCCTCCTTTGATCGTCACTGGTCTCAGTCCTGCTCCAATCCCCTTTGGTGGTCCTAGCGATCTAGAGGTTCTTGCTTTCCTTGAGTCGCATCAGAGAGGCGGATTACAACTGCGATACTGA

Protein sequence

MLDRGRRRQRESTDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAFLESHQRGGLQLRY*

Homology

[Close]

BLAST of MELO3C010306 vs. TrEMBL
Match: A0A0A0LLD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G371090 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-19
Identity = 52/69 (75.36%), Postives = 53/69 (76.81%), Query Frame = 1


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAF 70
          ES   LRWA QNLKLHSS  DSTD TFV LHVQPPP I  GLSP PIPFGGPSDLEV AF
Sbjct: 17 ESMGALRWALQNLKLHSSSPDSTDGTFVALHVQPPPSIAAGLSPDPIPFGGPSDLEVPAF 76

Query: 71 ---LESHQR 77
             +ESHQR
Sbjct: 77 TAAIESHQR 85

[Close]

BLAST of MELO3C010306 vs. TrEMBL
Match: G7KBJ5_MEDTR (Adenine nucleotide alpha hydrolase superfamily protein OS=Medicago truncatula GN=MTR_5g065980 PE=4 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-14
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 1


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDR-TFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLA 70
          ES + LRWA +NLKL S   DSTD  +F++LHVQ PP I TGL+P  IPFGGPSDLEV A
Sbjct: 19 ESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGGPSDLEVPA 78

Query: 71 F---LESHQR 77
          F   +E+HQ+
Sbjct: 79 FAAAIEAHQK 88

[Close]

BLAST of MELO3C010306 vs. TrEMBL
Match: G7KBJ3_MEDTR (Adenine nucleotide alpha hydrolase superfamily protein OS=Medicago truncatula GN=MTR_5g065980 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-14
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 1


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDR-TFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLA 70
          ES + LRWA +NLKL S   DSTD  +F++LHVQ PP I TGL+P  IPFGGPSDLEV A
Sbjct: 19 ESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGGPSDLEVPA 78

Query: 71 F---LESHQR 77
          F   +E+HQ+
Sbjct: 79 FAAAIEAHQK 88

[Close]

BLAST of MELO3C010306 vs. TrEMBL
Match: B7FH01_MEDTR (Adenine nucleotide alpha hydrolase superfamily protein OS=Medicago truncatula GN=MTR_5g065980 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-14
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 1


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDR-TFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLA 70
          ES + LRWA +NLKL S   DSTD  +F++LHVQ PP I TGL+P  IPFGGPSDLEV A
Sbjct: 19 ESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGGPSDLEVPA 78

Query: 71 F---LESHQR 77
          F   +E+HQ+
Sbjct: 79 FAAAIEAHQK 88

[Close]

BLAST of MELO3C010306 vs. TrEMBL
Match: I1MAZ6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G181000 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.9e-13
Identity = 43/70 (61.43%), Postives = 49/70 (70.00%), Query Frame = 1


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDR-TFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLA 70
          ES + LRWA  NLKL S   DSTD  +F V HVQ PP I TGL+P  IPFGGPSDLEV A
Sbjct: 19 ESMNALRWALNNLKLRSPAPDSTDAPSFTVFHVQSPPSIATGLNPGAIPFGGPSDLEVPA 78

Query: 71 F---LESHQR 77
          F   +E+HQ+
Sbjct: 79 FTAAIEAHQK 88

[Close]

BLAST of MELO3C010306 vs. TAIR10
Match: AT1G09740.1 (AT1G09740.1 Adenine nucleotide alpha hydrolases-like superfamily protein)

HSP 1 Score: 77.4 bits (189), Expect = 4.6e-15
Identity = 41/68 (60.29%), Postives = 45/68 (66.18%), Query Frame = 1


Query: 12 STDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAF- 71
          S + LRWA  NLKL SS SDS+   FVVLHVQP P +  G+SP  IPFGGPS LEV AF 
Sbjct: 20 SMEALRWALDNLKLSSSSSDSS---FVVLHVQPSPSVAAGVSPGTIPFGGPSGLEVPAFT 79

Query: 72 --LESHQR 77
            +E HQ+
Sbjct: 80 AAIEQHQK 84

[Close]

BLAST of MELO3C010306 vs. NCBI nr
Match: gi|659088362|ref|XP_008444941.1| (PREDICTED: uncharacterized protein LOC103488134 [Cucumis melo])

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-21
Identity = 56/69 (81.16%), Postives = 57/69 (82.61%), Query Frame = 1


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAF 70
          ES D LRWAFQNLKL SSG DSTD TFVVLHVQPPP I  GLSPAPIPFGGPSDLEV AF
Sbjct: 17 ESMDALRWAFQNLKLCSSGPDSTDGTFVVLHVQPPPSIAAGLSPAPIPFGGPSDLEVPAF 76

Query: 71 ---LESHQR 77
             +ESHQR
Sbjct: 77 TAAIESHQR 85

[Close]

BLAST of MELO3C010306 vs. NCBI nr
Match: gi|449461379|ref|XP_004148419.1| (PREDICTED: uncharacterized protein LOC101203754 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-19
Identity = 52/69 (75.36%), Postives = 53/69 (76.81%), Query Frame = 1


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDRTFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLAF 70
          ES   LRWA QNLKLHSS  DSTD TFV LHVQPPP I  GLSP PIPFGGPSDLEV AF
Sbjct: 17 ESMGALRWALQNLKLHSSSPDSTDGTFVALHVQPPPSIAAGLSPDPIPFGGPSDLEVPAF 76

Query: 71 ---LESHQR 77
             +ESHQR
Sbjct: 77 TAAIESHQR 85

[Close]

BLAST of MELO3C010306 vs. NCBI nr
Match: gi|922356662|ref|XP_003615272.2| (adenine nucleotide alpha hydrolase superfamily protein [Medicago truncatula])

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-14
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 1


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDR-TFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLA 70
          ES + LRWA +NLKL S   DSTD  +F++LHVQ PP I TGL+P  IPFGGPSDLEV A
Sbjct: 19 ESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGGPSDLEVPA 78

Query: 71 F---LESHQR 77
          F   +E+HQ+
Sbjct: 79 FAAAIEAHQK 88

[Close]

BLAST of MELO3C010306 vs. NCBI nr
Match: gi|357489965|ref|XP_003615270.1| (adenine nucleotide alpha hydrolase superfamily protein [Medicago truncatula])

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-14
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 1


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDR-TFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLA 70
          ES + LRWA +NLKL S   DSTD  +F++LHVQ PP I TGL+P  IPFGGPSDLEV A
Sbjct: 19 ESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGGPSDLEVPA 78

Query: 71 F---LESHQR 77
          F   +E+HQ+
Sbjct: 79 FAAAIEAHQK 88

[Close]

BLAST of MELO3C010306 vs. NCBI nr
Match: gi|357489967|ref|XP_003615271.1| (adenine nucleotide alpha hydrolase superfamily protein [Medicago truncatula])

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-14
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 1


Query: 11 ESTDTLRWAFQNLKLHSSGSDSTDR-TFVVLHVQPPPLIVTGLSPAPIPFGGPSDLEVLA 70
          ES + LRWA +NLKL S   DSTD  +F++LHVQ PP I TGL+P  IPFGGPSDLEV A
Sbjct: 19 ESMNALRWALENLKLRSPAPDSTDAGSFIILHVQSPPSIATGLNPGSIPFGGPSDLEVPA 78

Query: 71 F---LESHQR 77
          F   +E+HQ+
Sbjct: 79 FAAAIEAHQK 88

The following BLAST results are available for this feature:

BLAST of MELO3C010306 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLD9_CUCSA	2.0e-19	75.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G371090 PE=4 SV=1	[more]
G7KBJ5_MEDTR	3.4e-14	61.43	Adenine nucleotide alpha hydrolase superfamily protein OS=Medicago truncatula GN...	[more]
G7KBJ3_MEDTR	3.4e-14	61.43	Adenine nucleotide alpha hydrolase superfamily protein OS=Medicago truncatula GN...	[more]
B7FH01_MEDTR	3.4e-14	61.43	Adenine nucleotide alpha hydrolase superfamily protein OS=Medicago truncatula GN...	[more]
I1MAZ6_SOYBN	2.9e-13	61.43	Uncharacterized protein OS=Glycine max GN=GLYMA_14G181000 PE=4 SV=1	[more]

BLAST of MELO3C010306 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09740.1	4.6e-15	60.29	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]

BLAST of MELO3C010306 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088362\|ref\|XP_008444941.1\|	2.4e-21	81.16	PREDICTED: uncharacterized protein LOC103488134 [Cucumis melo]	[more]
gi\|449461379\|ref\|XP_004148419.1\|	2.9e-19	75.36	PREDICTED: uncharacterized protein LOC101203754 [Cucumis sativus]	[more]
gi\|922356662\|ref\|XP_003615272.2\|	4.8e-14	61.43	adenine nucleotide alpha hydrolase superfamily protein [Medicago truncatula]	[more]
gi\|357489965\|ref\|XP_003615270.1\|	4.8e-14	61.43	adenine nucleotide alpha hydrolase superfamily protein [Medicago truncatula]	[more]
gi\|357489967\|ref\|XP_003615271.1\|	4.8e-14	61.43	adenine nucleotide alpha hydrolase superfamily protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0042221	response to chemical
biological_process	GO:0009605	response to external stimulus
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010306T1	MELO3C010306T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31964	FAMILY NOT NAMED	coord: 11..76 score: 4.1
None	No IPR available	PANTHER	PTHR31964:SF2	ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE PROTEIN	coord: 11..76 score: 4.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C010306	Wax gourd	mewgoB267
MELO3C010306	Wax gourd	mewgoB286
MELO3C010306	Wax gourd	mewgoB290
MELO3C010306	Melon (DHL92) v3.5.1	memeB103
MELO3C010306	Cucurbita moschata (Rifu)	cmomeB098
MELO3C010306	Cucumber (Gy14) v1	cgymeB213
MELO3C010306	Cucumber (Gy14) v1	cgymeB421
MELO3C010306	Cucumber (Gy14) v1	cgymeB512
MELO3C010306	Cucurbita maxima (Rimu)	cmameB022
MELO3C010306	Cucurbita maxima (Rimu)	cmameB058
MELO3C010306	Cucurbita maxima (Rimu)	cmameB105
MELO3C010306	Cucurbita maxima (Rimu)	cmameB719
MELO3C010306	Cucurbita moschata (Rifu)	cmomeB011
MELO3C010306	Cucurbita moschata (Rifu)	cmomeB049
MELO3C010306	Cucurbita moschata (Rifu)	cmomeB710
MELO3C010306	Wild cucumber (PI 183967)	cpimeB048
MELO3C010306	Wild cucumber (PI 183967)	cpimeB110
MELO3C010306	Wild cucumber (PI 183967)	cpimeB190
MELO3C010306	Cucumber (Chinese Long) v2	cumeB047
MELO3C010306	Cucumber (Chinese Long) v2	cumeB197
MELO3C010306	Watermelon (Charleston Gray)	mewcgB232
MELO3C010306	Watermelon (Charleston Gray)	mewcgB250
MELO3C010306	Watermelon (Charleston Gray)	mewcgB258
MELO3C010306	Watermelon (97103) v1	mewmB276
MELO3C010306	Watermelon (97103) v1	mewmB284
MELO3C010306	Watermelon (97103) v1	mewmB293
MELO3C010306	Cucurbita pepo (Zucchini)	cpemeB082
MELO3C010306	Cucurbita pepo (Zucchini)	cpemeB334
MELO3C010306	Cucurbita pepo (Zucchini)	cpemeB621
MELO3C010306	Cucurbita pepo (Zucchini)	cpemeB716
MELO3C010306	Bottle gourd (USVL1VR-Ls)	lsimeB102
MELO3C010306	Bottle gourd (USVL1VR-Ls)	lsimeB295
MELO3C010306	Bottle gourd (USVL1VR-Ls)	lsimeB403
MELO3C010306	Cucumber (Gy14) v2	cgybmeB049
MELO3C010306	Cucumber (Gy14) v2	cgybmeB095
MELO3C010306	Cucumber (Gy14) v2	cgybmeB164
MELO3C010306	Silver-seed gourd	carmeB0131
MELO3C010306	Silver-seed gourd	carmeB0572
MELO3C010306	Silver-seed gourd	carmeB0664
MELO3C010306	Cucumber (Chinese Long) v3	cucmeB054
MELO3C010306	Cucumber (Chinese Long) v3	cucmeB116
MELO3C010306	Cucumber (Chinese Long) v3	cucmeB194
MELO3C010306	Watermelon (97103) v2	mewmbB239
MELO3C010306	Watermelon (97103) v2	mewmbB256
MELO3C010306	Watermelon (97103) v2	mewmbB265