MELO3C010294.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C010294.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionphosphopantothenoylcysteine decarboxylase subunit VHS3-like
Locationchr02 : 16489485 .. 16489706 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATACACCAACATATCGGTTGCAACACATGGAAAAGAATGATCCTATCAACTTCAACCTCATTAAAGATGAAGATGATGATTCTGTCGACTGCGACCGCATTGAAGATGAAGATGATGATCCTATCGATTGTGACCGCTTTGAAGATGAAGATGATGATTGTCTGGGCCGCGCCACCTTGAAGATGGAGATGATGATCGTCTCGACTGCGCTACATTGA

mRNA sequence

ATGGATACACCAACATATCGGTTGCAACACATGGAAAAGAATGATCCTATCAACTTCAACCTCATTAAAGATGAAGATGATGATTCTGTCGACTGCGACCGCATTGAAGATGAAGATGATGATCCTATCGATTGTGACCGCTTTGAAGATGAAGATGATGATTGTCTGGGCCGCGCCACCTTGAAGATGGAGATGATGATCGTCTCGACTGCGCTACATTGA

Coding sequence (CDS)

ATGGATACACCAACATATCGGTTGCAACACATGGAAAAGAATGATCCTATCAACTTCAACCTCATTAAAGATGAAGATGATGATTCTGTCGACTGCGACCGCATTGAAGATGAAGATGATGATCCTATCGATTGTGACCGCTTTGAAGATGAAGATGATGATTGTCTGGGCCGCGCCACCTTGAAGATGGAGATGATGATCGTCTCGACTGCGCTACATTGA

Protein sequence

MDTPTYRLQHMEKNDPINFNLIKDEDDDSVDCDRIEDEDDDPIDCDRFEDEDDDCLGRATLKMEMMIVSTALH
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004427inorganic diphosphatase activity
GO:0000287magnesium ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006796phosphate-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR008162Pyrophosphatase
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006796 phosphate-containing compound metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003674 molecular_function
molecular_function GO:0004427 inorganic diphosphatase activity
molecular_function GO:0000287 magnesium ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010294.2.1MELO3C010294.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008162Inorganic pyrophosphatasePROSITEPS00387PPASEcoord: 39..45

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010294.2Wild cucumber (PI 183967)cpimedB181
MELO3C010294.2Cucumber (Chinese Long) v2cumedB038
MELO3C010294.2Cucumber (Chinese Long) v2cumedB182
MELO3C010294.2Melon (DHL92) v3.6.1medmedB102
MELO3C010294.2Bottle gourd (USVL1VR-Ls)lsimedB108
MELO3C010294.2Bottle gourd (USVL1VR-Ls)lsimedB309
MELO3C010294.2Bottle gourd (USVL1VR-Ls)lsimedB425
MELO3C010294.2Watermelon (Charleston Gray)medwcgB221
MELO3C010294.2Watermelon (Charleston Gray)medwcgB242
MELO3C010294.2Watermelon (Charleston Gray)medwcgB249
MELO3C010294.2Watermelon (97103) v1medwmB268
MELO3C010294.2Watermelon (97103) v1medwmB288
MELO3C010294.2Silver-seed gourdcarmedB0135
MELO3C010294.2Silver-seed gourdcarmedB0636
MELO3C010294.2Silver-seed gourdcarmedB0675
MELO3C010294.2Silver-seed gourdcarmedB0894
MELO3C010294.2Cucumber (Chinese Long) v3cucmedB052
MELO3C010294.2Cucumber (Chinese Long) v3cucmedB185
MELO3C010294.2Watermelon (97103) v2medwmbB242
MELO3C010294.2Watermelon (97103) v2medwmbB251
MELO3C010294.2Wax gourdmedwgoB286
MELO3C010294.2Wax gourdmedwgoB290
MELO3C010294.2Cucumber (Gy14) v2cgybmedB045
MELO3C010294.2Cucumber (Gy14) v2cgybmedB162
MELO3C010294.2Cucumber (Gy14) v1cgymedB416
MELO3C010294.2Cucumber (Gy14) v1cgymedB511
MELO3C010294.2Cucurbita maxima (Rimu)cmamedB023
MELO3C010294.2Cucurbita maxima (Rimu)cmamedB060
MELO3C010294.2Cucurbita maxima (Rimu)cmamedB112
MELO3C010294.2Cucurbita maxima (Rimu)cmamedB469
MELO3C010294.2Cucurbita moschata (Rifu)cmomedB011
MELO3C010294.2Cucurbita moschata (Rifu)cmomedB052
MELO3C010294.2Cucurbita moschata (Rifu)cmomedB105
MELO3C010294.2Cucurbita pepo (Zucchini)cpemedB392
MELO3C010294.2Cucurbita pepo (Zucchini)cpemedB604
MELO3C010294.2Cucurbita pepo (Zucchini)cpemedB734
MELO3C010294.2Cucurbita pepo (Zucchini)cpemedB851
MELO3C010294.2Wild cucumber (PI 183967)cpimedB042