MELO3C010284.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C010284.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr02 : 16328876 .. 16329460 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTCCAACCAAAAACACAGCCTCAGTCCTCACCACTGTTTCCCTAATTCAATCCTTCTCTTAATTAACAACCATTTTCACGCTCCCAATTGAAATAACCATGGCCTCAATTAAGCTACCACTTGTATTCTTTGTTTGCATGGCCATTTCAGCAGTATCCGGCATTGCACACACCGGGGCAGCGGCACCTTCTGATCCTTTCACAGCAGAAGAATTGTCATTGTTGGGTTGCACATCCTTCATTTCTGAGGCAACAAAATGTGTGATTGATGTAATGAAAAATGCAGTTGCTCCTCATCCATCATGTTGCAAAGCATTTTCTAAGCTCAATGACTGTTCCCCTGAGTTTCTCAAAGGCATTCCCTCGGCTGACATGATTTTGATTAAAGGAATTTGTGCTTTGTGGGGTGTTTGATCAATTTCCTAGACTAAAGCATTTTTTAGTTAATATATATAGGATCATTAGGAATAACAACATTATCATTTCTCCTCTACCTATTTTATGGATTTGAAGAAAGAGTGGATTTTGTTAGAGGGAAAATGTGTTGTTTGATCCGTTAATTGAATGAGAACTTAACATTTTGTT

mRNA sequence

ACTCCAACCAAAAACACAGCCTCAGTCCTCACCACTGTTTCCCTAATTCAATCCTTCTCTTAATTAACAACCATTTTCACGCTCCCAATTGAAATAACCATGGCCTCAATTAAGCTACCACTTGTATTCTTTGTTTGCATGGCCATTTCAGCAGTATCCGGCATTGCACACACCGGGGCAGCGGCACCTTCTGATCCTTTCACAGCAGAAGAATTGTCATTGTTGGGTTGCACATCCTTCATTTCTGAGGCAACAAAATGTGTGATTGATGTAATGAAAAATGCAGTTGCTCCTCATCCATCATGTTGCAAAGCATTTTCTAAGCTCAATGACTGTTCCCCTGAGTTTCTCAAAGGCATTCCCTCGGCTGACATGATTTTGATTAAAGGAATTTGTGCTTTGTGGGGTGTTTGATCAATTTCCTAGACTAAAGCATTTTTTAGTTAATATATATAGGATCATTAGGAATAACAACATTATCATTTCTCCTCTACCTATTTTATGGATTTGAAGAAAGAGTGGATTTTGTTAGAGGGAAAATGTGTTGTTTGATCCGTTAATTGAATGAGAACTTAACATTTTGTT

Coding sequence (CDS)

ATGGCCTCAATTAAGCTACCACTTGTATTCTTTGTTTGCATGGCCATTTCAGCAGTATCCGGCATTGCACACACCGGGGCAGCGGCACCTTCTGATCCTTTCACAGCAGAAGAATTGTCATTGTTGGGTTGCACATCCTTCATTTCTGAGGCAACAAAATGTGTGATTGATGTAATGAAAAATGCAGTTGCTCCTCATCCATCATGTTGCAAAGCATTTTCTAAGCTCAATGACTGTTCCCCTGAGTTTCTCAAAGGCATTCCCTCGGCTGACATGATTTTGATTAAAGGAATTTGTGCTTTGTGGGGTGTTTGA

Protein sequence

MASIKLPLVFFVCMAISAVSGIAHTGAAAPSDPFTAEELSLLGCTSFISEATKCVIDVMKNAVAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV
BLAST of MELO3C010284.2 vs. NCBI nr
Match: KGN65195.1 (hypothetical protein Csa_1G263980 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-22
Identity = 54/103 (52.43%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 1   MASIKLPLVFFVCMAISAVSGIAHTGAAAPSDPFTAEELSLLGCTSFISEATKCVIDVMK 60
           +AS+KLP++F VC+AI A+  +  T      D F+ ++++ + CT F  EATKC+IDVMK
Sbjct: 2   VASLKLPIIFLVCIAILALPVMTRT--TTTLDQFSTKDVASVNCTVFTFEATKCMIDVMK 61

Query: 61  NAVAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWG 104
           N++ PHPSCC+A  KLNDC+PE  K +PS D  LIK IC LWG
Sbjct: 62  NSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICELWG 102

BLAST of MELO3C010284.2 vs. NCBI nr
Match: KGN65096.1 (hypothetical protein Csa_1G212820 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 2.6e-21
Identity = 55/103 (53.40%), Postives = 67/103 (65.05%), Query Frame = 0

Query: 3   SIKLPLVFFVCMAISAVSGIAHTGAAAPS--DPFTAEELSLLGCTSFISEATKCVIDVMK 62
           ++KL LVF  C AI A    A   A AP+   PF  E++S   C SF+ EATKC+IDV K
Sbjct: 10  TMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFK 69

Query: 63  NAVAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWG 104
           + +A HP+CCKA SKL  CS  F  GIPSADMI+IK +C  WG
Sbjct: 70  HPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTSWG 112

BLAST of MELO3C010284.2 vs. NCBI nr
Match: KGN65190.1 (hypothetical protein Csa_1G263450 [Cucumis sativus])

HSP 1 Score: 91.7 bits (226), Expect = 1.6e-15
Identity = 52/103 (50.49%), Postives = 65/103 (63.11%), Query Frame = 0

Query: 2   ASIKLPLVFFVCMAISAVSGIAHTGAAAPSDP---FTAEELSLLGCTSFISEATKCVIDV 61
           ++I+L +VF VC+ I A S  A T A APS     F  ++ S   C  FI EAT CV+DV
Sbjct: 10  STIRLAIVFLVCIVILAPSVTARTMAEAPSPVLVLFDEDDSSFSNCAPFILEATMCVVDV 69

Query: 62  MKNAVAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICAL 102
           +K  VA HPSCCKA S LNDC+P+  + IP  DM +IK IC L
Sbjct: 70  IKLPVASHPSCCKAISDLNDCAPQIYQHIP--DMDVIKKICGL 110

BLAST of MELO3C010284.2 vs. TrEMBL
Match: tr|A0A0A0LTE1|A0A0A0LTE1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263980 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.1e-23
Identity = 54/103 (52.43%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 1   MASIKLPLVFFVCMAISAVSGIAHTGAAAPSDPFTAEELSLLGCTSFISEATKCVIDVMK 60
           +AS+KLP++F VC+AI A+  +  T      D F+ ++++ + CT F  EATKC+IDVMK
Sbjct: 2   VASLKLPIIFLVCIAILALPVMTRT--TTTLDQFSTKDVASVNCTVFTFEATKCMIDVMK 61

Query: 61  NAVAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWG 104
           N++ PHPSCC+A  KLNDC+PE  K +PS D  LIK IC LWG
Sbjct: 62  NSMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICELWG 102

BLAST of MELO3C010284.2 vs. TrEMBL
Match: tr|A0A0A0LYQ3|A0A0A0LYQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G212820 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-21
Identity = 55/103 (53.40%), Postives = 67/103 (65.05%), Query Frame = 0

Query: 3   SIKLPLVFFVCMAISAVSGIAHTGAAAPS--DPFTAEELSLLGCTSFISEATKCVIDVMK 62
           ++KL LVF  C AI A    A   A AP+   PF  E++S   C SF+ EATKC+IDV K
Sbjct: 10  TMKLILVFICCTAIFAPPAAAMKVAMAPTQPQPFPTEDISFFPCFSFVPEATKCMIDVFK 69

Query: 63  NAVAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWG 104
           + +A HP+CCKA SKL  CS  F  GIPSADMI+IK +C  WG
Sbjct: 70  HPIAAHPTCCKAISKLKSCSSSFFNGIPSADMIVIKSVCTSWG 112

BLAST of MELO3C010284.2 vs. TrEMBL
Match: tr|A0A0A0LTD6|A0A0A0LTD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-15
Identity = 52/103 (50.49%), Postives = 65/103 (63.11%), Query Frame = 0

Query: 2   ASIKLPLVFFVCMAISAVSGIAHTGAAAPSDP---FTAEELSLLGCTSFISEATKCVIDV 61
           ++I+L +VF VC+ I A S  A T A APS     F  ++ S   C  FI EAT CV+DV
Sbjct: 10  STIRLAIVFLVCIVILAPSVTARTMAEAPSPVLVLFDEDDSSFSNCAPFILEATMCVVDV 69

Query: 62  MKNAVAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICAL 102
           +K  VA HPSCCKA S LNDC+P+  + IP  DM +IK IC L
Sbjct: 70  IKLPVASHPSCCKAISDLNDCAPQIYQHIP--DMDVIKKICGL 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN65195.11.4e-2252.43hypothetical protein Csa_1G263980 [Cucumis sativus][more]
KGN65096.12.6e-2153.40hypothetical protein Csa_1G212820 [Cucumis sativus][more]
KGN65190.11.6e-1550.49hypothetical protein Csa_1G263450 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LTE1|A0A0A0LTE1_CUCSA9.1e-2352.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263980 PE=4 SV=1[more]
tr|A0A0A0LYQ3|A0A0A0LYQ3_CUCSA1.7e-2153.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G212820 PE=4 SV=1[more]
tr|A0A0A0LTD6|A0A0A0LTD6_CUCSA1.1e-1550.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010284.2.1MELO3C010284.2.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C010284.2Lsi06G010240Bottle gourd (USVL1VR-Ls)lsimedB425
MELO3C010284.2Bhi02G000748Wax gourdmedwgoB290
MELO3C010284.2CsaV3_1G028080Cucumber (Chinese Long) v3cucmedB052
The following gene(s) are paralogous to this gene:

None