MELO3C010259 (gene) Melon (DHL92) v3.5.1

NameMELO3C010259
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionG-patch domain containing protein
Locationchr2 : 15193607 .. 15193981 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAAATGGGATTCGTACAAGTTGGAGGACTAGGGAAAGATGGTCAAGGAATGACTCTACCCATTGAAGTGATGAAACGACCAAAATCATTAGGGTTAGGGCATCAAGTTCTCCGAGGCCTCAACATCTACTGTTGGTGATAACAAGGCAAGTTGGGCATCCTCTGCTAGAACGGGGTCCCGTGCTTTGAAAAAATCTAAAAAAATTGGTGCTTTGAAGTGCACACTAAAGGATTTGGGTCGAAGATGATAGCAAAGATGGGATTTGTCGAAGGCATGAGATTGGGAAAAGATTCACAAGGGATAGTCAACCCTTTGCTTCCTGTTAGATGGCCTAAAGCTCTGAGGATTGGGAGGCAAATGTTACATTAG

mRNA sequence

ATGGCAAAAATGGGATTCGTACAAGTTGGAGGACTAGGGAAAGATGGTCAAGGAATGACTCTACCCATTGAAGTGATGAAACGACCAAAATCATTAGGGTTAGGGCATCAAGTTCTCCGAGGCCTCAACATCTACTTGCACACTAAAGGATTTGGGTCGAAGATGATAGCAAAGATGGGATTTGTCGAAGGCATGAGATTGGGAAAAGATTCACAAGGGATAGTCAACCCTTTGCTTCCTGTTAGATGGCCTAAAGCTCTGAGGATTGGGAGGCAAATGTTACATTAG

Coding sequence (CDS)

ATGGCAAAAATGGGATTCGTACAAGTTGGAGGACTAGGGAAAGATGGTCAAGGAATGACTCTACCCATTGAAGTGATGAAACGACCAAAATCATTAGGGTTAGGGCATCAAGTTCTCCGAGGCCTCAACATCTACTTGCACACTAAAGGATTTGGGTCGAAGATGATAGCAAAGATGGGATTTGTCGAAGGCATGAGATTGGGAAAAGATTCACAAGGGATAGTCAACCCTTTGCTTCCTGTTAGATGGCCTAAAGCTCTGAGGATTGGGAGGCAAATGTTACATTAG

Protein sequence

MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGLGHQVLRGLNIYLHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQMLH*
BLAST of MELO3C010259 vs. TrEMBL
Match: A0A0A0LTU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G266150 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.2e-25
Identity = 70/119 (58.82%), Postives = 78/119 (65.55%), Query Frame = 1

Query: 1   MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGLGHQV------------LRGLN----- 60
           MAKMGFV+ GGLGKDGQGMT PIEVMKRPKSLGLG +               G++     
Sbjct: 662 MAKMGFVEGGGLGKDGQGMTHPIEVMKRPKSLGLGIEFSEASTSAAGDNQASGISSARTG 721

Query: 61  ------------IYLHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
                         +HTKGFGSKM+AKMGFVEGM LGKDSQGI+NPLLPVR PKA  +G
Sbjct: 722 SSALEKTKKIGAFEVHTKGFGSKMMAKMGFVEGMGLGKDSQGIINPLLPVRRPKARGLG 780

BLAST of MELO3C010259 vs. TrEMBL
Match: A0A0A0LTU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G266150 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-07
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 1

Query: 46  LHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
           LHTKGFGSKM+AKMGFVEG  LGKD QG+ +P+  ++ PK+L +G
Sbjct: 652 LHTKGFGSKMMAKMGFVEGGGLGKDGQGMTHPIEVMKRPKSLGLG 696


HSP 2 Score: 112.5 bits (280), Expect = 2.9e-22
Identity = 62/120 (51.67%), Postives = 75/120 (62.50%), Query Frame = 1

Query: 1   MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGLGHQVLRGLNIYL-------------- 60
           +AKMGF++ GGLGKDGQGM  PIEV++RPKSLGLG +    +++ +              
Sbjct: 645 LAKMGFIEGGGLGKDGQGMAAPIEVIQRPKSLGLGVEFSNTVDLPVNNTPVKSYPVKNKS 704

Query: 61  ----------------HTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
                           HTKGFGSKM+AKMGFVEGM LGKDSQGIVNPL  VR PK+  +G
Sbjct: 705 QSQRVSQPQRVGSFEKHTKGFGSKMMAKMGFVEGMGLGKDSQGIVNPLAAVRLPKSRGLG 764

BLAST of MELO3C010259 vs. TrEMBL
Match: M5WE10_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001771mg PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 7.8e-07
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 1

Query: 46  LHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
           +HTKGFGSKM+AKMGF+EG  LGKD QG+  P+  ++ PK+L +G
Sbjct: 635 VHTKGFGSKMLAKMGFIEGGGLGKDGQGMAAPIEVIQRPKSLGLG 679


HSP 2 Score: 111.3 bits (277), Expect = 6.6e-22
Identity = 62/117 (52.99%), Postives = 76/117 (64.96%), Query Frame = 1

Query: 1   MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGLG-----------------------HQ 60
           MAKMGFV+ GGLG+DGQG+  PIE ++RPKSLGLG                       H 
Sbjct: 659 MAKMGFVEGGGLGRDGQGIAEPIEAIQRPKSLGLGANIPDTNGDPMDNKLQSAGRLGKHA 718

Query: 61  VLRGLNIY-LHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIGRQM 94
            L+ L  +  HTKGFGSKM+A+MGFVEGM LGK+SQGIVNPL  VR PK+  +G ++
Sbjct: 719 KLQSLGAFEKHTKGFGSKMMARMGFVEGMGLGKNSQGIVNPLAAVRLPKSRGLGAKV 775

BLAST of MELO3C010259 vs. TrEMBL
Match: B9SC24_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0701710 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.5e-07
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 1

Query: 46  LHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
           +HTKGFGSKM+AKMGFVEG  LG+D QGI  P+  ++ PK+L +G
Sbjct: 649 VHTKGFGSKMMAKMGFVEGGGLGRDGQGIAEPIEAIQRPKSLGLG 693


HSP 2 Score: 110.9 bits (276), Expect = 8.6e-22
Identity = 62/114 (54.39%), Postives = 73/114 (64.04%), Query Frame = 1

Query: 1   MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGLG-----------------------HQ 60
           MAKMG+V+ GGLGKDGQGM  PIEV++RPKSLGLG                       H 
Sbjct: 640 MAKMGYVEGGGLGKDGQGMAEPIEVIQRPKSLGLGANISNPTDDSMENKPQTIERFEKHA 699

Query: 61  VLRGLNIY-LHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
             R L  +  HTKGFGSKM+A+MGFVEGM LGK SQGI+NPL+  R PK+  +G
Sbjct: 700 KPRNLGAFEKHTKGFGSKMMARMGFVEGMGLGKHSQGIINPLVAARLPKSRGLG 753

BLAST of MELO3C010259 vs. TrEMBL
Match: A0A067KR52_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03975 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-06
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 1

Query: 46  LHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
           +HTKGFGSKM+AKMG+VEG  LGKD QG+  P+  ++ PK+L +G
Sbjct: 630 VHTKGFGSKMMAKMGYVEGGGLGKDGQGMAEPIEVIQRPKSLGLG 674


HSP 2 Score: 109.4 bits (272), Expect = 2.5e-21
Identity = 61/116 (52.59%), Postives = 72/116 (62.07%), Query Frame = 1

Query: 1   MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGLG------------------------- 60
           MAKMGF++ GGLGKDGQGM  P+EV +RPKSLGLG                         
Sbjct: 619 MAKMGFIEGGGLGKDGQGMAQPVEVTQRPKSLGLGVDFSDISVDSVKNKPQSSRTGTSGK 678

Query: 61  HQVLRGLNIY-LHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
                 L  +  HTKGFGSK++AKMGFVEGM LGKDSQGIVNP++ V+ PKA  +G
Sbjct: 679 QSKTENLGAFEKHTKGFGSKIMAKMGFVEGMGLGKDSQGIVNPIVAVKRPKARGLG 734

BLAST of MELO3C010259 vs. TAIR10
Match: AT3G09850.1 (AT3G09850.1 D111/G-patch domain-containing protein)

HSP 1 Score: 87.4 bits (215), Expect = 5.1e-18
Identity = 56/138 (40.58%), Postives = 68/138 (49.28%), Query Frame = 1

Query: 1   MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGLGHQVL-------------------RG 60
           MAKMGF+  GGLGKDG+G+  PIE ++RPKSLGLG                       R 
Sbjct: 643 MAKMGFIDGGGLGKDGKGIAQPIEAVQRPKSLGLGLDFSIDTEDPSPSSNNNNNAKRNRS 702

Query: 61  LNIYLH---------------------------TKGFGSKMIAKMGFVEGMRLGKDSQGI 93
            +   H                           T GFGS+M+A+MGFVEG  LG++SQGI
Sbjct: 703 SSSGKHGKRITHDNGASGSGRIRDKRLGAFEQHTTGFGSRMMARMGFVEGSGLGRESQGI 762


HSP 2 Score: 59.7 bits (143), Expect = 1.1e-09
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 1

Query: 46  LHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
           +HT+GFGSKM+AKMGF++G  LGKD +GI  P+  V+ PK+L +G
Sbjct: 633 VHTRGFGSKMMAKMGFIDGGGLGKDGKGIAQPIEAVQRPKSLGLG 677

BLAST of MELO3C010259 vs. NCBI nr
Match: gi|659086366|ref|XP_008443896.1| (PREDICTED: uncharacterized protein LOC103487380 isoform X1 [Cucumis melo])

HSP 1 Score: 123.2 bits (308), Expect = 2.4e-25
Identity = 70/119 (58.82%), Postives = 75/119 (63.03%), Query Frame = 1

Query: 1   MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGLGHQVLRGLN----------------- 60
           MAKMGFV+ GGLGKDGQGMT PIEVMKRPKSLGLG +                       
Sbjct: 679 MAKMGFVEGGGLGKDGQGMTHPIEVMKRPKSLGLGIEFSEASTSAAGDNQASWVSSARTR 738

Query: 61  ------------IYLHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
                         +HTKGFGSKM+AKMGFVEGM LGKDSQGIVNPLLPVR PKA  +G
Sbjct: 739 SGALEKSKRIGAFEVHTKGFGSKMMAKMGFVEGMGLGKDSQGIVNPLLPVRRPKARGLG 797

BLAST of MELO3C010259 vs. NCBI nr
Match: gi|659086366|ref|XP_008443896.1| (PREDICTED: uncharacterized protein LOC103487380 isoform X1 [Cucumis melo])

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-07
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 1

Query: 46  LHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
           LHTKGFGSKM+AKMGFVEG  LGKD QG+ +P+  ++ PK+L +G
Sbjct: 669 LHTKGFGSKMMAKMGFVEGGGLGKDGQGMTHPIEVMKRPKSLGLG 713


HSP 2 Score: 123.2 bits (308), Expect = 2.4e-25
Identity = 70/119 (58.82%), Postives = 75/119 (63.03%), Query Frame = 1

Query: 1   MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGLGHQVLRGLN----------------- 60
           MAKMGFV+ GGLGKDGQGMT PIEVMKRPKSLGLG +                       
Sbjct: 674 MAKMGFVEGGGLGKDGQGMTHPIEVMKRPKSLGLGIEFSEASTSAAGDNQASWVSSARTR 733

Query: 61  ------------IYLHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
                         +HTKGFGSKM+AKMGFVEGM LGKDSQGIVNPLLPVR PKA  +G
Sbjct: 734 SGALEKSKRIGAFEVHTKGFGSKMMAKMGFVEGMGLGKDSQGIVNPLLPVRRPKARGLG 792

BLAST of MELO3C010259 vs. NCBI nr
Match: gi|659086368|ref|XP_008443898.1| (PREDICTED: uncharacterized protein LOC103487380 isoform X2 [Cucumis melo])

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-07
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 1

Query: 46  LHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
           LHTKGFGSKM+AKMGFVEG  LGKD QG+ +P+  ++ PK+L +G
Sbjct: 664 LHTKGFGSKMMAKMGFVEGGGLGKDGQGMTHPIEVMKRPKSLGLG 708


HSP 2 Score: 122.9 bits (307), Expect = 3.1e-25
Identity = 70/119 (58.82%), Postives = 78/119 (65.55%), Query Frame = 1

Query: 1   MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGLGHQV------------LRGLN----- 60
           MAKMGFV+ GGLGKDGQGMT PIEVMKRPKSLGLG +               G++     
Sbjct: 672 MAKMGFVEGGGLGKDGQGMTHPIEVMKRPKSLGLGIEFSEASTSAAGDNQASGISSARTG 731

Query: 61  ------------IYLHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
                         +HTKGFGSKM+AKMGFVEGM LGKDSQGI+NPLLPVR PKA  +G
Sbjct: 732 SSALEKTKKIGAFEVHTKGFGSKMMAKMGFVEGMGLGKDSQGIINPLLPVRRPKARGLG 790

BLAST of MELO3C010259 vs. NCBI nr
Match: gi|449457935|ref|XP_004146703.1| (PREDICTED: uncharacterized protein LOC101215133 isoform X2 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-07
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 1

Query: 46  LHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
           LHTKGFGSKM+AKMGFVEG  LGKD QG+ +P+  ++ PK+L +G
Sbjct: 662 LHTKGFGSKMMAKMGFVEGGGLGKDGQGMTHPIEVMKRPKSLGLG 706


HSP 2 Score: 122.9 bits (307), Expect = 3.1e-25
Identity = 70/119 (58.82%), Postives = 78/119 (65.55%), Query Frame = 1

Query: 1   MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGLGHQV------------LRGLN----- 60
           MAKMGFV+ GGLGKDGQGMT PIEVMKRPKSLGLG +               G++     
Sbjct: 682 MAKMGFVEGGGLGKDGQGMTHPIEVMKRPKSLGLGIEFSEASTSAAGDNQASGISSARTG 741

Query: 61  ------------IYLHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
                         +HTKGFGSKM+AKMGFVEGM LGKDSQGI+NPLLPVR PKA  +G
Sbjct: 742 SSALEKTKKIGAFEVHTKGFGSKMMAKMGFVEGMGLGKDSQGIINPLLPVRRPKARGLG 800

BLAST of MELO3C010259 vs. NCBI nr
Match: gi|778660215|ref|XP_011655819.1| (PREDICTED: uncharacterized protein LOC101215133 isoform X1 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-07
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 1

Query: 46  LHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
           LHTKGFGSKM+AKMGFVEG  LGKD QG+ +P+  ++ PK+L +G
Sbjct: 672 LHTKGFGSKMMAKMGFVEGGGLGKDGQGMTHPIEVMKRPKSLGLG 716


HSP 2 Score: 122.9 bits (307), Expect = 3.1e-25
Identity = 70/119 (58.82%), Postives = 78/119 (65.55%), Query Frame = 1

Query: 1   MAKMGFVQVGGLGKDGQGMTLPIEVMKRPKSLGLGHQV------------LRGLN----- 60
           MAKMGFV+ GGLGKDGQGMT PIEVMKRPKSLGLG +               G++     
Sbjct: 662 MAKMGFVEGGGLGKDGQGMTHPIEVMKRPKSLGLGIEFSEASTSAAGDNQASGISSARTG 721

Query: 61  ------------IYLHTKGFGSKMIAKMGFVEGMRLGKDSQGIVNPLLPVRWPKALRIG 91
                         +HTKGFGSKM+AKMGFVEGM LGKDSQGI+NPLLPVR PKA  +G
Sbjct: 722 SSALEKTKKIGAFEVHTKGFGSKMMAKMGFVEGMGLGKDSQGIINPLLPVRRPKARGLG 780

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LTU7_CUCSA2.2e-2558.82Uncharacterized protein OS=Cucumis sativus GN=Csa_1G266150 PE=4 SV=1[more]
A0A0A0LTU7_CUCSA2.0e-0764.44Uncharacterized protein OS=Cucumis sativus GN=Csa_1G266150 PE=4 SV=1[more]
M5WE10_PRUPE7.8e-0760.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001771mg PE=4 SV=1[more]
B9SC24_RICCO3.5e-0762.22Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0701710 PE=4 SV=1[more]
A0A067KR52_JATCU1.0e-0660.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03975 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G09850.15.1e-1840.58 D111/G-patch domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|659086366|ref|XP_008443896.1|2.4e-2558.82PREDICTED: uncharacterized protein LOC103487380 isoform X1 [Cucumis melo][more]
gi|659086366|ref|XP_008443896.1|2.9e-0764.44PREDICTED: uncharacterized protein LOC103487380 isoform X1 [Cucumis melo][more]
gi|659086368|ref|XP_008443898.1|2.9e-0764.44PREDICTED: uncharacterized protein LOC103487380 isoform X2 [Cucumis melo][more]
gi|449457935|ref|XP_004146703.1|2.9e-0764.44PREDICTED: uncharacterized protein LOC101215133 isoform X2 [Cucumis sativus][more]
gi|778660215|ref|XP_011655819.1|2.9e-0764.44PREDICTED: uncharacterized protein LOC101215133 isoform X1 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010259T1MELO3C010259T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000467G-patch domainPFAMPF01585G-patchcoord: 48..78
score: 1.2E-9coord: 1..36
score: 7.
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 1..37
score: 0.15coord: 46..92
score: 9.
IPR000467G-patch domainPROFILEPS50174G_PATCHcoord: 48..78
score: 10.664coord: 1..39
score: 9
NoneNo IPR availablePANTHERPTHR23329TUFTELIN-INTERACTING PROTEIN 11-RELATEDcoord: 1..90
score: 5.0
NoneNo IPR availablePANTHERPTHR23329:SF9SUBFAMILY NOT NAMEDcoord: 1..90
score: 5.0

The following gene(s) are paralogous to this gene:

None