MELO3C010255 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C010255
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	ATP-dependent RNA helicase, putative
Location	chr2 : 15165613 .. 15169082 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTGAATTGATAGAGGAAGCAGAGAGAAACCCAAGAAATGACTCTTTAAGTGATAGGTACCTTAATCAAGCTGCTGAAATTTTTGCATCAGGTTGCAAGGAAGGTACTTAAAATTTCTTATGGAGCAGATTAGATTTGCATTCCTCTCTGATTTATGGCTGCTATCCTCTTTCCTATGTTCTGATGCTCCATTTTACTGTTAGGCACTATGTATTGTTTTTAATTGATGTATTTGTGCTATCAACATTAACTGTTATCAGTTATGCCATGATAACTTTGTGCGCTCTTAACTGAGATATTTTCTGTTTCTTTTTTCTCTTTCCTTTCCTGTAGATGGTGGAATCTCAGATATGTTAAATGTTGATTTTTTAGAGGAACCCTTTTTCTCAAAGAAGCTTCTACGACTTATTGGAATTCTTTCTTCCTTCAGGTCAGAATTGAAAATCTGTTACTGTACTATTGCTTTTATGTTTTATTGTTGTCTTTATGGAAGTGATAGATAAAAATACGTTATGCAAATGAGCAGCGGCTGTTCTCCAATTACTTCAATATATTATATTCCAAAAGGTGATTATATCTCTCTCTCTCCTCCTCCTCTTTAACATGACTATGCGATAATTACCCCCTCCCCGCAAGATAAGAGGAGGCAAGAGAGAGAGAGATGTAATCACCTATTGGAATATATATATTGAAGATAATTGGAGAGCAGCTGCTGCTCATTTGCAGAATATTTTTGTATCAAGGTTGTTACCTATGAATATCTATTATAAGTAATATATGTTTAAAAGGGATTTTGTTATGTGCAAATGTGCATACTGTAATCTTATTACTAGGACCCAATATATAACTACGTACAATTTTTTTTTGATAAAATGTAACTACCTACATATGTACACAAGTATTAGGATGTGGCTGGATCTTCCTAGCAGCTTTGCACAGCTCATGTCTTTGGCATGTACTTAATTTGTATAAAGAAAGTGAATTTCTTGTAAAAGCTACTAAAAACCTGTTACTTTGTCTTTGTTTCTTCTTTTCAGGCAACAACTCAATATGAAATGTATAATTTTTGTGAATAGAATAGTTATAGCTCGGTCCTTGTCATACATACTTCAGAATCTAAAATTTTTGGCATATTGGAAGTGTGATTTTCTTGTTGGTGTACACTCAAAATTGAGGAGCATGTCAAGGAAGACCATGAACCATATTCTTACAAAATTCCGATCAGGGGAGGTAAGTTGGTACCCCCCCCCCCCCCCCCCAACCACCACCACAATCCACACACCAAAACACACACGTGCACACCACCTTGGACAAGTGTGGTCAGGTATCTTCTTTTGTAAGATTATGTGCTTCTGCTTGGCATCTTCTGTATTATTTATTTTTGAGGGGTAGGATAGATTGAAAATCTAAGTCATCAATTCAGTTGTTGATGAATGTTCTTGACTAACCGTCTGATTATGAATGTTCATGGTCCACTGATTCAGTTAAAAAAAAATACAATAAAAGTATGTACTGGGATGGAGAGGAAATCACCAATGATCACTACATTAATAATATTTTAAACAACAGTTCTCTCTCTCTCAGCCTCTTGATAAAAAACAAGAAAAGGACATAAGTGCCTTCTTTAATTATTATTTTATAATAATAATTTATTATCACTTTAGTGACCGGAGTAATTACAGTAACTCTTCAAGAAACTTCAGTCAGTTGGAAATCAAAATACACCAGGTCCATATAATATGCATTTTCCTCGGAATCTCTTGATAATTTTTGCTTCTTCTTTATAATCTCATTCTCCGAAAAGGTGCCCTCAACTCATTTTTACCTACACAGTTCTGGCCCTTTTCTTGAAGCTGCAATCTCCTCTACACCTTCATATGTTTATGATTATTATTATTCCTATTTTCTCTAACAATGTTGGGTTGTGACACATCATGGTTCAACCTTTCAGAGTAGTTCCCGAGGGGAAGTATGGCCTGTGGACCATCATAACTTTATTTTCTGCATGGATACTTTCTTCACTTTGCTTTAGTATGTCATGCTTGAACATTCTCCTAAGCATACAAAATGTCAAACGTACAAAACATCATTCTTCAGGAAGTTGAACGAAAATATCATAAAAAGAGGAGTAATGATAACACAGTACTTGTAAAAGAGGATGAATCCCCATCATCTACGAATAACTTGAAATAAGTTGATTAACCCCTTTGTGGCTCCTTTTGAAGCCAATACATGTATTTTCATTTTTTCTTACTTCTTAGCTATTAATTACTCCTAATCCCAAAACAAAACTTCATGTTTTTAAGTTAGGGTAAATTTAGATATTCTGTCATATGAGCGCAACAAATAGACTGTAAATACTGGAATGAGCATTGATAATGATTGAGTTTTTTACTTAACGGCTTGTATTCAACATCATGTTAAACTATCTTCAGTTTACAAGCTTAAACCATTACAATATGATGAATTTATTTAATCATTTCACTTATTTTTTATATCAACGAAAACCTTGTTTCTGATTATTTTTAACCTCTTCTAGCATGTTGAAGCCAATGGTTGTTTTGAACTTGAAAGAGGTAAGTTTATGATTAATCCTTATAGCCATTGCTCTGGCAGCTAAACCTCTTGATCGCTACAAAGGTTGGTGAAGAAGGGCTTGATATTCAGACTTGCTGTCTTGTCATACGATTTGATCTTCCTGAAACAGTATCTAGCTTTATCCAATCAAGAGGTCGAGCACGAATGCCTCAGTCTGAATATGCATTCCTTGTTGATAGGTTCTCTTATCCTTTTTCCCTCTTTAAATTACAGACATTTTTTAAATAATATTCCTTAGTTGATCAAATTATTCCACTTCTCAGTGGGAATGAAAAGGAGCTAGGATTGATAAACGAATTTCGAAAAGATGAAAATCGGATGAACAGAGAAATTTCTTCACGCTCATCCAATGAGACATTTCATAGTCATGAAGAAAGCATCTATAGAGTGGCTTCAACTGGTGCATCTATTACATCTGGACGTAGTATATCCTTACTGCATGAATATTGCTCAAAACTTCCACATGACGAGTAAGCAAAATTCTCTCCTATACTAGATTACATATTCAATAACTTAAAATTCATTAAGTGTGTTTAATTTATTTTTAACAATGTATAAACTTTTGCAATATTCTTCTATGAACAGGTACTTCGACCCCAAGCCGAAGTTTTTCTATTTTGATGATTTAGGAGGGACTGTATGTCATGTAAATCTACCCTCCAATGCACCGATCCCCCAAGTTGTCAGCAGCCCACAATCTTCTAGGGATGCTGCTAAAAAGGATGCTTGTCTAAAAGCTGTAGAGGAATTGCATAAACTTGGTGCTCTCAGTGACTATCTCTTGCCCATGAGAGGCAGAGGCAGTGCCAATGAACAGGAATCAGAACTTAACTCCTCCGATTCTGACAGCTCTGAAGGTTCACTTGAGTAA

mRNA sequence

AAGTGAATTGATAGAGGAAGCAGAGAGAAACCCAAGAAATGACTCTTTAAGTGATAGGTACCTTAATCAAGCTGCTGAAATTTTTGCATCAGGTTGCAAGGAAGATGGTGGAATCTCAGATATGTTAAATGTTGATTTTTTAGAGGAACCCTTTTTCTCAAAGAAGCTTCTACGACTTATTGGAATTCTTTCTTCCTTCAGGCAACAACTCAATATGAAATGTATAATTTTTGTGAATAGAATAGTTATAGCTCGGTCCTTGTCATACATACTTCAGAATCTAAAATTTTTGGCATATTGGAAGTGTGATTTTCTTGTTGGTGTACACTCAAAATTGAGGAGCATGTCAAGGAAGACCATGAACCATATTCTTACAAAATTCCGATCAGGGGAGCTAAACCTCTTGATCGCTACAAAGGTTGGTGAAGAAGGGCTTGATATTCAGACTTGCTGTCTTGTCATACGATTTGATCTTCCTGAAACAGTATCTAGCTTTATCCAATCAAGAGGTCGAGCACGAATGCCTCAGTCTGAATATGCATTCCTTGTTGATAGTGGGAATGAAAAGGAGCTAGGATTGATAAACGAATTTCGAAAAGATGAAAATCGGATGAACAGAGAAATTTCTTCACGCTCATCCAATGAGACATTTCATAGTCATGAAGAAAGCATCTATAGAGTGGCTTCAACTGGTGCATCTATTACATCTGGACGTAGTATATCCTTACTGCATGAATATTGCTCAAAACTTCCACATGACGAGTACTTCGACCCCAAGCCGAAGTTTTTCTATTTTGATGATTTAGGAGGGACTGTATGTCATGTAAATCTACCCTCCAATGCACCGATCCCCCAAGTTGTCAGCAGCCCACAATCTTCTAGGGATGCTGCTAAAAAGGATGCTTGTCTAAAAGCTGTAGAGGAATTGCATAAACTTGGTGCTCTCAGTGACTATCTCTTGCCCATGAGAGGCAGAGGCAGTGCCAATGAACAGGAATCAGAACTTAACTCCTCCGATTCTGACAGCTCTGAAGGTTCACTTGAGTAA

Coding sequence (CDS)

ATGTTAAATGTTGATTTTTTAGAGGAACCCTTTTTCTCAAAGAAGCTTCTACGACTTATTGGAATTCTTTCTTCCTTCAGGCAACAACTCAATATGAAATGTATAATTTTTGTGAATAGAATAGTTATAGCTCGGTCCTTGTCATACATACTTCAGAATCTAAAATTTTTGGCATATTGGAAGTGTGATTTTCTTGTTGGTGTACACTCAAAATTGAGGAGCATGTCAAGGAAGACCATGAACCATATTCTTACAAAATTCCGATCAGGGGAGCTAAACCTCTTGATCGCTACAAAGGTTGGTGAAGAAGGGCTTGATATTCAGACTTGCTGTCTTGTCATACGATTTGATCTTCCTGAAACAGTATCTAGCTTTATCCAATCAAGAGGTCGAGCACGAATGCCTCAGTCTGAATATGCATTCCTTGTTGATAGTGGGAATGAAAAGGAGCTAGGATTGATAAACGAATTTCGAAAAGATGAAAATCGGATGAACAGAGAAATTTCTTCACGCTCATCCAATGAGACATTTCATAGTCATGAAGAAAGCATCTATAGAGTGGCTTCAACTGGTGCATCTATTACATCTGGACGTAGTATATCCTTACTGCATGAATATTGCTCAAAACTTCCACATGACGAGTACTTCGACCCCAAGCCGAAGTTTTTCTATTTTGATGATTTAGGAGGGACTGTATGTCATGTAAATCTACCCTCCAATGCACCGATCCCCCAAGTTGTCAGCAGCCCACAATCTTCTAGGGATGCTGCTAAAAAGGATGCTTGTCTAAAAGCTGTAGAGGAATTGCATAAACTTGGTGCTCTCAGTGACTATCTCTTGCCCATGAGAGGCAGAGGCAGTGCCAATGAACAGGAATCAGAACTTAACTCCTCCGATTCTGACAGCTCTGAAGGTTCACTTGAGTAA

Protein sequence

MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSHEESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSNAPIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDSDSSEGSLE*

Homology

[Close]

BLAST of MELO3C010255 vs. Swiss-Prot
Match: DCL4_ARATH (Dicer-like protein 4 OS=Arabidopsis thaliana GN=DCL4 PE=1 SV=2)

HSP 1 Score: 370.2 bits (949), Expect = 2.3e-101
Identity = 191/303 (63.04%), Postives = 236/303 (77.89%), Query Frame = 1


Query: 1   MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 60
           +L++  L+EP FS+KL++LI ILS FR + +MKCIIFVNRIV AR+LS IL NL+ L  W
Sbjct: 458 LLSLAALKEPLFSRKLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSW 517

Query: 61  KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 120
           K DFLVG+ S L+SMSR++M  IL +F+S ELNLL+ATKVGEEGLDIQTCCLVIR+DLPE
Sbjct: 518 KSDFLVGLSSGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPE 577

Query: 121 TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH 180
           TV+SFIQSRGRARMPQSEYAFLVDSGNEKE+ LI  F+ +E+RMN EI+ RSS ET    
Sbjct: 578 TVTSFIQSRGRARMPQSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCPRL 637

Query: 181 EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFY--FDDLGGTVCHVNLP 240
           +E +Y+V  TGA I+ G SISLL++YCS+LPHDE+F PKP+F +   D+ GGT+C + LP
Sbjct: 638 DEELYKVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLP 697

Query: 241 SNAPIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSS 300
           +NAPI ++ SS   S +AAKKDACLKAV ELH LG L+D+LLP     S +E E EL+  
Sbjct: 698 ANAPISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLP----DSKDEIEDELSDD 756

Query: 301 DSD 302
           + D
Sbjct: 758 EFD 756

[Close]

BLAST of MELO3C010255 vs. Swiss-Prot
Match: DCL4_ORYSJ (Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 PE=2 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 9.9e-89
Identity = 167/302 (55.30%), Postives = 215/302 (71.19%), Query Frame = 1


Query: 3   NVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKC 62
           +++ LEEPFFS K   LI +LS +  Q NMKCI+FV RI +AR++S ILQNLK L +WKC
Sbjct: 389 DLEKLEEPFFSNKFSVLINVLSRYGLQENMKCIVFVKRITVARAISNILQNLKCLEFWKC 448

Query: 63  DFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETV 122
           +FLVG HS  ++MSR  M+ I+ +F SGE+NLL+AT VGEEGLDIQTCCLV+RFDLPETV
Sbjct: 449 EFLVGCHSGSKNMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETV 508

Query: 123 SSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSHEE 182
           +SFIQSRGRARM +S+Y  L++  N+    L+N +   E+ MN EI SR+SN+ F   EE
Sbjct: 509 ASFIQSRGRARMTKSKYVVLLERENQSHEKLLNGYIAGESIMNEEIDSRTSNDMFDCLEE 568

Query: 183 SIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSNAP 242
           +IY+V +TGASI++  S+SLLH YC  LP D +F P P FFY D + G +C + LP NA 
Sbjct: 569 NIYQVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFYIDGIEGIICRLILPPNAA 628

Query: 243 IPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDSDS 302
             Q    P  S+D AK+DACLKA  +LHKLGAL+D+LLP  G GS   + S  N+S ++ 
Sbjct: 629 FRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLP--GPGSRKNKVSVTNNSSNNK 688

Query: 303 SE 305
            E
Sbjct: 689 VE 688

[Close]

BLAST of MELO3C010255 vs. Swiss-Prot
Match: DCL3A_ORYSJ (Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica GN=DCL3A PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.8e-49
Identity = 108/280 (38.57%), Postives = 160/280 (57.14%), Query Frame = 1


Query: 4   VDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKCD 63
           V+  +  + S KL  LI I  SF    + +C+IFV+R + AR +  +++ +  LA++   
Sbjct: 388 VEAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRKITARVIDRMIKKIGHLAHFTVS 447

Query: 64  FLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVS 123
           FL G  S + +++ K     L  FRSG++NLL  T V EEG+ +  C  VIRFDLP T  
Sbjct: 448 FLTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFDLPRTTR 507

Query: 124 SFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNET---FHSH 183
           S++QSRGRAR   S+Y  +++ GN K+  LI+   + E  M +  SSR S      F  +
Sbjct: 508 SYVQSRGRARQEDSQYILMIERGNVKQNDLISAIVRSETSMVKIASSRESGNLSPGFVPN 567

Query: 184 EE-SIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPS 243
           EE + Y V +TGA +T+  SIS+++ YC KLP D+ + PKP F +     G VC + LP 
Sbjct: 568 EEINEYHVGTTGAKVTADSSISIVYRYCEKLPQDKCYSPKPTFEFTHHDDGYVCTLALPP 627

Query: 244 NAPIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYL 280
           +A +  +V     +   AK+  CL A ++LH+LGAL D+L
Sbjct: 628 SAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDHL 667

[Close]

BLAST of MELO3C010255 vs. Swiss-Prot
Match: DCL2_ARATH (Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana GN=At3g03300 PE=1 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-47
Identity = 109/278 (39.21%), Postives = 160/278 (57.55%), Query Frame = 1


Query: 8   EEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQN-LKFLAYWKCDFLV 67
           E    + K + LI  L  +    N++CIIFV+R++ A  L  +L   L     WK  ++ 
Sbjct: 364 EAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVA 423

Query: 68  GVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFI 127
           G +S L++ +RK  N I+  FR G +N+++AT + EEGLD+Q+C LVIRFD    + SFI
Sbjct: 424 GNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFI 483

Query: 128 QSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRS---SNETFHSHEES 187
           QSRGRARM  S+Y  +V+SG+      + ++     RM  E    S           +E 
Sbjct: 484 QSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDSDEP 543

Query: 188 IYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSNAPI 247
           ++RV STGA++T   S+SL++ YCS+LP DEYF P P+F    D G   C + LP + P+
Sbjct: 544 LFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGS--CTLYLPKSCPV 603

Query: 248 PQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLP 282
            +V    +++    K+  CLKA  +LHK+GALSD+L+P
Sbjct: 604 KEV--KAEANNKVLKQAVCLKACIQLHKVGALSDHLVP 637

[Close]

BLAST of MELO3C010255 vs. Swiss-Prot
Match: DCL2A_ORYSJ (Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica GN=DCL2A PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.1e-46
Identity = 107/280 (38.21%), Postives = 161/280 (57.50%), Query Frame = 1


Query: 8   EEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKCDFLVG 67
           ++   + K+  LI  L  +R   +++CI+FV R++ +  L ++L ++  ++ W    + G
Sbjct: 374 QDGILTPKVHCLIRTLLQYRHMQDLRCIVFVERVITSIVLEHLLSSIHQMSGWNVKHMAG 433

Query: 68  VHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQ 127
               L S SRK    I+  FR G+++++IAT++ EEGLD+ +C LVIRFD   TV SFIQ
Sbjct: 434 SRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQ 493

Query: 128 SRGRARMPQSEYAFLVDSG------NEKELGLINEFRKDENRMNREISSRSSNETFHSHE 187
           SRGRARM  S+Y  LV  G      N ++     +  ++E+     IS +    T    E
Sbjct: 494 SRGRARMENSDYLLLVGRGDVEAQTNAEKFLASGQIMREESLRLGSISCQPLENTL--CE 553

Query: 188 ESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSNA 247
           ++ YRV ST A +T   S+ L+H +CSKLP DEYF+P P+ F  D   GT C ++LP ++
Sbjct: 554 DTYYRVESTRAIVTLNSSVPLIHFFCSKLPSDEYFNPLPR-FDIDKASGT-CTLHLPKSS 613

Query: 248 PIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLP 282
           P+  V  + +      K+  CLKA +ELH +GAL+D LLP
Sbjct: 614 PVQTV--NVEGEGSILKETVCLKACQELHAIGALTDSLLP 647

[Close]

BLAST of MELO3C010255 vs. TrEMBL
Match: M5W9S4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000144mg PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 2.9e-127
Identity = 233/301 (77.41%), Postives = 265/301 (88.04%), Query Frame = 1


Query: 4   VDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKCD 63
           V+ L+EPFFS+KLLRLIGILSSFR Q NMKCIIFVNR+V A SLSYILQ LKFLA WKCD
Sbjct: 379 VEILKEPFFSRKLLRLIGILSSFRLQQNMKCIIFVNRVVTASSLSYILQRLKFLASWKCD 438

Query: 64  FLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVS 123
           FLVGVHS+L SMSRK MN IL KFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETV+
Sbjct: 439 FLVGVHSRLMSMSRKKMNIILDKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVA 498

Query: 124 SFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSHEES 183
           SFIQSRGRARMPQSEYAFLV+SGN+KEL LI +FRKDE++MN EI+ R+S++TF   E+ 
Sbjct: 499 SFIQSRGRARMPQSEYAFLVNSGNQKELDLIEKFRKDEDKMNMEIAFRTSSDTFIGSEDR 558

Query: 184 IYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSNAPI 243
           IY+V S+GASI+SG SISLLH+YCSKLPHDEYFDP PKFF+ DDLGGT+CH+ LPSNAPI
Sbjct: 559 IYKVDSSGASISSGYSISLLHQYCSKLPHDEYFDPNPKFFFLDDLGGTICHIILPSNAPI 618

Query: 244 PQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDSDSS 303
            Q+VS+ QSS + AKKDACLKA+EELHKLGALSDYLLP   + + N +E  L+SSDSDS+
Sbjct: 619 HQIVSTQQSSMEDAKKDACLKAIEELHKLGALSDYLLPQ--QSNPNVEELMLDSSDSDST 677

Query: 304 E 305
           E
Sbjct: 679 E 677

[Close]

BLAST of MELO3C010255 vs. TrEMBL
Match: A0A061GID4_THECC (Dicer-like protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_037118 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 9.2e-126
Identity = 233/302 (77.15%), Postives = 265/302 (87.75%), Query Frame = 1


Query: 3   NVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKC 62
           +V+ L+EPFFSKKLLRLIGILS+FR Q NMKCIIFVNRIV ARSLSYILQNLKFL+  KC
Sbjct: 388 DVEILKEPFFSKKLLRLIGILSTFRLQPNMKCIIFVNRIVTARSLSYILQNLKFLSSLKC 447

Query: 63  DFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETV 122
            FLVGVHS L+SMSRKTM  IL KFR+GELNLL+ATKVGEEGLDIQTCCLVIRFDLPETV
Sbjct: 448 HFLVGVHSGLKSMSRKTMKKILEKFRTGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 507

Query: 123 SSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSHEE 182
           +SFIQSRGRARMP SEYAFLV+SGNE+EL LI  F+ DE+RMN EIS R+S E F S EE
Sbjct: 508 ASFIQSRGRARMPLSEYAFLVNSGNERELNLIKNFKNDEDRMNMEISFRTSTEVFTSLEE 567

Query: 183 SIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSNAP 242
            +Y+V S+GASI+SG SISLLH+YCSKLPHDEYFDP+P FFYFDD+GGT+C++ LPSNAP
Sbjct: 568 RMYKVDSSGASISSGYSISLLHQYCSKLPHDEYFDPRPSFFYFDDIGGTICNIVLPSNAP 627

Query: 243 IPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDSDS 302
           I Q+ S+PQSS DAAKKDACLKAVEELHKLGAL+DYLLP+  + +A E+E+ L SSDS S
Sbjct: 628 INQIASTPQSSVDAAKKDACLKAVEELHKLGALNDYLLPL--QKNAFEEETVLESSDSGS 687

Query: 303 SE 305
           SE
Sbjct: 688 SE 687

[Close]

BLAST of MELO3C010255 vs. TrEMBL
Match: B9SC13_RICCO (Ribonuclease III, putative OS=Ricinus communis GN=RCOM_0701500 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.0e-124
Identity = 227/303 (74.92%), Postives = 265/303 (87.46%), Query Frame = 1


Query: 3   NVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKC 62
           +V+ L EPFFS+KLLRLIGILS+FR Q NMK I+FVNRIV ARSLSY+LQNLKFL  WKC
Sbjct: 384 SVEVLTEPFFSRKLLRLIGILSTFRLQPNMKGIVFVNRIVTARSLSYVLQNLKFLISWKC 443

Query: 63  DFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETV 122
           DFLVGVHS L+SMSRKTMN IL KF++G+LNLLIATKVGEEGLDIQTCCLV+RFDLPETV
Sbjct: 444 DFLVGVHSGLKSMSRKTMNSILEKFKTGKLNLLIATKVGEEGLDIQTCCLVVRFDLPETV 503

Query: 123 SSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSHEE 182
           +SFIQSRGRARMPQSEYAFLVDSGN+KEL LI  FR+DE+RMN EISSR+SNETF S EE
Sbjct: 504 ASFIQSRGRARMPQSEYAFLVDSGNQKELDLIERFRRDEDRMNMEISSRTSNETFVSIEE 563

Query: 183 SIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSNAP 242
            +Y+V  +GA I+S  SISLLH YCSKLPHDEYFDPKP+FF+FDDLGGT+CH+ LP+NAP
Sbjct: 564 KVYKVDESGACISSAYSISLLHHYCSKLPHDEYFDPKPQFFFFDDLGGTICHIILPANAP 623

Query: 243 IPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDSDS 302
           + Q+V +PQSSR+AAKKDACLKA+E+LHKLG+LS++LLP       NE ES L SS+ ++
Sbjct: 624 VHQIVGTPQSSREAAKKDACLKAIEQLHKLGSLSNFLLP--HEKDVNE-ESMLASSEPEN 683

Query: 303 SEG 306
           +EG
Sbjct: 684 NEG 683

[Close]

BLAST of MELO3C010255 vs. TrEMBL
Match: A0A0B0P3D1_GOSAR (Dicer-like protein 4 OS=Gossypium arboreum GN=F383_06347 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 4.3e-123
Identity = 230/302 (76.16%), Postives = 261/302 (86.42%), Query Frame = 1


Query: 3   NVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKC 62
           +V+ L+EPFFSKKLLRL+GILS+FR Q NMKCIIFVNRIV ARSLSYILQNLKFL +WKC
Sbjct: 387 DVEILKEPFFSKKLLRLVGILSTFRLQPNMKCIIFVNRIVTARSLSYILQNLKFLLFWKC 446

Query: 63  DFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETV 122
            FLVGVHS L+SMSRKTM +IL KFR+GELNLLIATKVGEEGLDIQTCCLVIRFDLPETV
Sbjct: 447 HFLVGVHSGLKSMSRKTMKNILEKFRTGELNLLIATKVGEEGLDIQTCCLVIRFDLPETV 506

Query: 123 SSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSHEE 182
           +SFIQSRGRARMP SEYAFLV+SGNEKEL LI  F+KDE+RMN EIS R+S E     EE
Sbjct: 507 ASFIQSRGRARMPLSEYAFLVNSGNEKELDLIKNFKKDEDRMNVEISFRTSTEVSIGLEE 566

Query: 183 SIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSNAP 242
            IY V S+GASI+SG SISLLH YCSKLPHDEYF PKP F+YF+D GGT+C++ LPSNAP
Sbjct: 567 RIYTVDSSGASISSGYSISLLHHYCSKLPHDEYFFPKPSFYYFEDSGGTICNIILPSNAP 626

Query: 243 IPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDSDS 302
           I Q+ S+PQSS +AAKKDACLKA+EELHKLGAL+D+LLP+  + S  E+E+ L SSDS S
Sbjct: 627 INQIASTPQSSVNAAKKDACLKAIEELHKLGALTDHLLPL--QNSVLEEETLLVSSDSGS 686

Query: 303 SE 305
           SE
Sbjct: 687 SE 686

[Close]

BLAST of MELO3C010255 vs. TrEMBL
Match: A0A0D2Q9H6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G053300 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 4.3e-123
Identity = 230/302 (76.16%), Postives = 261/302 (86.42%), Query Frame = 1


Query: 3   NVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKC 62
           +V+ L+EPFFSKKLLRL+GILS+FR Q NMKCIIFVNRIV ARSLSYILQNLKFL +WKC
Sbjct: 236 DVEILKEPFFSKKLLRLVGILSTFRLQPNMKCIIFVNRIVTARSLSYILQNLKFLLFWKC 295

Query: 63  DFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETV 122
            FLVGVHS L+SMSRKTM +IL KFR+GELNLLIATKVGEEGLDIQTCCLVIRFDLPETV
Sbjct: 296 HFLVGVHSGLKSMSRKTMKNILEKFRTGELNLLIATKVGEEGLDIQTCCLVIRFDLPETV 355

Query: 123 SSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSHEE 182
           +SFIQSRGRARMP SEYAFLV+SGNEKEL LI  F+KDE+RMN EIS R+S E     EE
Sbjct: 356 ASFIQSRGRARMPLSEYAFLVNSGNEKELDLIKNFKKDEDRMNVEISFRTSTEVSIGLEE 415

Query: 183 SIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSNAP 242
            IY V S+GASI+SG SISLLH YCSKLPHDEYF PKP F+YF+D GGT+C++ LPSNAP
Sbjct: 416 RIYMVDSSGASISSGYSISLLHHYCSKLPHDEYFFPKPSFYYFEDSGGTICNIILPSNAP 475

Query: 243 IPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDSDS 302
           I Q+ S+PQSS +AAKKDACLKA+EELHKLGAL+D+LLP+  + S  E+E+ L SSDS S
Sbjct: 476 INQIASTPQSSVNAAKKDACLKAIEELHKLGALTDHLLPL--QNSVLEEETLLVSSDSGS 535

Query: 303 SE 305
           SE
Sbjct: 536 SE 535

[Close]

BLAST of MELO3C010255 vs. TAIR10
Match: AT5G20320.1 (AT5G20320.1 dicer-like 4)

HSP 1 Score: 370.2 bits (949), Expect = 1.3e-102
Identity = 191/303 (63.04%), Postives = 236/303 (77.89%), Query Frame = 1


Query: 1   MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 60
           +L++  L+EP FS+KL++LI ILS FR + +MKCIIFVNRIV AR+LS IL NL+ L  W
Sbjct: 458 LLSLAALKEPLFSRKLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSW 517

Query: 61  KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 120
           K DFLVG+ S L+SMSR++M  IL +F+S ELNLL+ATKVGEEGLDIQTCCLVIR+DLPE
Sbjct: 518 KSDFLVGLSSGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPE 577

Query: 121 TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH 180
           TV+SFIQSRGRARMPQSEYAFLVDSGNEKE+ LI  F+ +E+RMN EI+ RSS ET    
Sbjct: 578 TVTSFIQSRGRARMPQSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCPRL 637

Query: 181 EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFY--FDDLGGTVCHVNLP 240
           +E +Y+V  TGA I+ G SISLL++YCS+LPHDE+F PKP+F +   D+ GGT+C + LP
Sbjct: 638 DEELYKVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLP 697

Query: 241 SNAPIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSS 300
           +NAPI ++ SS   S +AAKKDACLKAV ELH LG L+D+LLP     S +E E EL+  
Sbjct: 698 ANAPISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLP----DSKDEIEDELSDD 756

Query: 301 DSD 302
           + D
Sbjct: 758 EFD 756

[Close]

BLAST of MELO3C010255 vs. TAIR10
Match: AT3G03300.1 (AT3G03300.1 dicer-like 2)

HSP 1 Score: 191.8 bits (486), Expect = 6.2e-49
Identity = 109/278 (39.21%), Postives = 160/278 (57.55%), Query Frame = 1


Query: 8   EEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQN-LKFLAYWKCDFLV 67
           E    + K + LI  L  +    N++CIIFV+R++ A  L  +L   L     WK  ++ 
Sbjct: 364 EAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVA 423

Query: 68  GVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFI 127
           G +S L++ +RK  N I+  FR G +N+++AT + EEGLD+Q+C LVIRFD    + SFI
Sbjct: 424 GNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFI 483

Query: 128 QSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRS---SNETFHSHEES 187
           QSRGRARM  S+Y  +V+SG+      + ++     RM  E    S           +E 
Sbjct: 484 QSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDSDEP 543

Query: 188 IYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSNAPI 247
           ++RV STGA++T   S+SL++ YCS+LP DEYF P P+F    D G   C + LP + P+
Sbjct: 544 LFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGS--CTLYLPKSCPV 603

Query: 248 PQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLP 282
            +V    +++    K+  CLKA  +LHK+GALSD+L+P
Sbjct: 604 KEV--KAEANNKVLKQAVCLKACIQLHKVGALSDHLVP 637

[Close]

BLAST of MELO3C010255 vs. TAIR10
Match: AT1G01040.2 (AT1G01040.2 dicer-like 1)

HSP 1 Score: 176.8 bits (447), Expect = 2.1e-44
Identity = 102/296 (34.46%), Postives = 159/296 (53.72%), Query Frame = 1


Query: 15  KLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKCDFLVGVHSKLRS 74
           K+  LI +L  ++   + + I+FV R+V A  L  +   L  L++ +C  ++G H+  + 
Sbjct: 648 KVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIG-HNNSQE 707

Query: 75  MSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARM 134
           M    M   ++KFR G + LL+AT V EEGLDI+ C +V+RFDL +TV ++IQSRGRAR 
Sbjct: 708 MKSSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARK 767

Query: 135 PQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSHEES----------- 194
           P S+Y  +V+ GN      +   R  E  + +E   R+  +  H  + S           
Sbjct: 768 PGSDYILMVERGNVSHAAFLRNARNSEETLRKEAIERT--DLSHLKDTSRLISIDAVPGT 827

Query: 195 IYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFY--FDDLGGTV---CHVNLP 254
           +Y+V +TGA ++   ++ L+H YCS+LP D Y   +P+F     +  GG     C + LP
Sbjct: 828 VYKVEATGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLP 887

Query: 255 SNAPIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESE 295
            NAP   +     SS   A++  CL A ++LH++GA +D LLP +G G   E+  +
Sbjct: 888 CNAPFEILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQ 940

[Close]

BLAST of MELO3C010255 vs. TAIR10
Match: AT3G43920.2 (AT3G43920.2 dicer-like 3)

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-15
Identity = 45/149 (30.20%), Postives = 74/149 (49.66%), Query Frame = 1


Query: 13  SKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKCDFLVGVHSKL 72
           S KL  L  +L SFR     +C+I V RI+ A+ +   ++    LAY    +L   +   
Sbjct: 392 SPKLKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKKEASLAYLNVLYLTENNPST 451

Query: 73  RSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRA 132
              ++K    I   F+ G++NLL  T V EEG  +  C  ++ FDLP+T+ S+ QS+  A
Sbjct: 452 NVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQKHA 511

Query: 133 RMPQSEYAFLVDSGNEKELGLINEFRKDE 162
           +   S+    ++ GN K+   +++  + E
Sbjct: 512 KQSNSKSIMFLERGNPKQRDHLHDLMRRE 540

[Close]

BLAST of MELO3C010255 vs. TAIR10
Match: AT1G35530.2 (AT1G35530.2 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 55.8 bits (133), Expect = 5.3e-08
Identity = 47/144 (32.64%), Postives = 65/144 (45.14%), Query Frame = 1


Query: 13  SKKLLRLIGILSSF---RQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKCDFLVGVH 72
           S KL +++ IL      +     + IIF N     R +   L N+  +   K    +G  
Sbjct: 446 SPKLSKMLEILVDHFKVKDPKTSRVIIFSNFRGSVRDIMNALSNIGDMV--KATEFIGQS 505

Query: 73  S--KLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQ 132
           S   L+  S+K    +L KFR+G  N+++AT +GEEGLDI    LVI FD   +    IQ
Sbjct: 506 SGKTLKGQSQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQ 565

Query: 133 SRGRARMPQSEYAFLV--DSGNEK 150
             GR     +    LV    G+EK
Sbjct: 566 RMGRTGRKNNGRPLLVLACEGSEK 587

[Close]

BLAST of MELO3C010255 vs. NCBI nr
Match: gi|659086351|ref|XP_008443888.1| (PREDICTED: dicer-like protein 4 isoform X2 [Cucumis melo])

HSP 1 Score: 604.4 bits (1557), Expect = 1.1e-169
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1


Query: 1   MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 60
           MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW
Sbjct: 390 MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 449

Query: 61  KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 120
           KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE
Sbjct: 450 KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 509

Query: 121 TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH 180
           TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH
Sbjct: 510 TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH 569

Query: 181 EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN 240
           EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN
Sbjct: 570 EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN 629

Query: 241 APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS 300
           APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS
Sbjct: 630 APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS 689

Query: 301 DSSE 305
           DSSE
Sbjct: 690 DSSE 693

[Close]

BLAST of MELO3C010255 vs. NCBI nr
Match: gi|659086353|ref|XP_008443889.1| (PREDICTED: dicer-like protein 4 isoform X3 [Cucumis melo])

HSP 1 Score: 604.4 bits (1557), Expect = 1.1e-169
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1


Query: 1   MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 60
           MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW
Sbjct: 390 MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 449

Query: 61  KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 120
           KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE
Sbjct: 450 KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 509

Query: 121 TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH 180
           TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH
Sbjct: 510 TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH 569

Query: 181 EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN 240
           EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN
Sbjct: 570 EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN 629

Query: 241 APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS 300
           APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS
Sbjct: 630 APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS 689

Query: 301 DSSE 305
           DSSE
Sbjct: 690 DSSE 693

[Close]

BLAST of MELO3C010255 vs. NCBI nr
Match: gi|659086355|ref|XP_008443891.1| (PREDICTED: dicer-like protein 4 isoform X4 [Cucumis melo])

HSP 1 Score: 604.4 bits (1557), Expect = 1.1e-169
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1


Query: 1   MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 60
           MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW
Sbjct: 155 MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 214

Query: 61  KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 120
           KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE
Sbjct: 215 KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 274

Query: 121 TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH 180
           TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH
Sbjct: 275 TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH 334

Query: 181 EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN 240
           EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN
Sbjct: 335 EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN 394

Query: 241 APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS 300
           APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS
Sbjct: 395 APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS 454

Query: 301 DSSE 305
           DSSE
Sbjct: 455 DSSE 458

[Close]

BLAST of MELO3C010255 vs. NCBI nr
Match: gi|659086349|ref|XP_008443887.1| (PREDICTED: dicer-like protein 4 isoform X1 [Cucumis melo])

HSP 1 Score: 604.4 bits (1557), Expect = 1.1e-169
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 1


Query: 1   MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 60
           MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW
Sbjct: 390 MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 449

Query: 61  KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 120
           KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE
Sbjct: 450 KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 509

Query: 121 TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH 180
           TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH
Sbjct: 510 TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH 569

Query: 181 EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN 240
           EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN
Sbjct: 570 EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN 629

Query: 241 APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS 300
           APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS
Sbjct: 630 APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS 689

Query: 301 DSSE 305
           DSSE
Sbjct: 690 DSSE 693

[Close]

BLAST of MELO3C010255 vs. NCBI nr
Match: gi|778660228|ref|XP_011655835.1| (PREDICTED: dicer-like protein 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 577.0 bits (1486), Expect = 1.9e-161
Identity = 290/304 (95.39%), Postives = 296/304 (97.37%), Query Frame = 1


Query: 1   MLNVDFLEEPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 60
           MLNVD LE+PFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNL FLAYW
Sbjct: 390 MLNVDILEDPFFSKKLLRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLNFLAYW 449

Query: 61  KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 120
           KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE
Sbjct: 450 KCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 509

Query: 121 TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREISSRSSNETFHSH 180
           TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREI SRSSNETF SH
Sbjct: 510 TVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREIYSRSSNETFDSH 569

Query: 181 EESIYRVASTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFFYFDDLGGTVCHVNLPSN 240
           EESIYRVASTGASITSGRSISLLHEYCSKLPHD+YFDPKP+F Y+DDLGGTVCHVNLPSN
Sbjct: 570 EESIYRVASTGASITSGRSISLLHEYCSKLPHDDYFDPKPQFSYYDDLGGTVCHVNLPSN 629

Query: 241 APIPQVVSSPQSSRDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESELNSSDS 300
           APIPQ+VS  QSS+DAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQES LNSSDS
Sbjct: 630 APIPQIVSRSQSSKDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESGLNSSDS 689

Query: 301 DSSE 305
           DSSE
Sbjct: 690 DSSE 693

The following BLAST results are available for this feature:

BLAST of MELO3C010255 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DCL4_ARATH	2.3e-101	63.04	Dicer-like protein 4 OS=Arabidopsis thaliana GN=DCL4 PE=1 SV=2	[more]
DCL4_ORYSJ	9.9e-89	55.30	Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 PE=2 SV...	[more]
DCL3A_ORYSJ	5.8e-49	38.57	Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica GN=DCL3A PE=2 ...	[more]
DCL2_ARATH	1.1e-47	39.21	Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana GN=At3g03300 PE=1 SV=2	[more]
DCL2A_ORYSJ	6.1e-46	38.21	Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica GN=DCL2A PE=2 ...	[more]

BLAST of MELO3C010255 vs. TrEMBL


Match Name	E-value	Identity	Description
M5W9S4_PRUPE	2.9e-127	77.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000144mg PE=4 SV=1	[more]
A0A061GID4_THECC	9.2e-126	77.15	Dicer-like protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_037118 PE=4 SV...	[more]
B9SC13_RICCO	1.0e-124	74.92	Ribonuclease III, putative OS=Ricinus communis GN=RCOM_0701500 PE=4 SV=1	[more]
A0A0B0P3D1_GOSAR	4.3e-123	76.16	Dicer-like protein 4 OS=Gossypium arboreum GN=F383_06347 PE=4 SV=1	[more]
A0A0D2Q9H6_GOSRA	4.3e-123	76.16	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G053300 PE=4 SV=1	[more]

BLAST of MELO3C010255 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20320.1	1.3e-102	63.04	dicer-like 4	[more]
AT3G03300.1	6.2e-49	39.21	dicer-like 2	[more]
AT1G01040.2	2.1e-44	34.46	dicer-like 1	[more]
AT3G43920.2	3.4e-15	30.20	dicer-like 3	[more]
AT1G35530.2	5.3e-08	32.64	DEAD/DEAH box RNA helicase family protein	[more]

BLAST of MELO3C010255 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086351\|ref\|XP_008443888.1\|	1.1e-169	100.00	PREDICTED: dicer-like protein 4 isoform X2 [Cucumis melo]	[more]
gi\|659086353\|ref\|XP_008443889.1\|	1.1e-169	100.00	PREDICTED: dicer-like protein 4 isoform X3 [Cucumis melo]	[more]
gi\|659086355\|ref\|XP_008443891.1\|	1.1e-169	100.00	PREDICTED: dicer-like protein 4 isoform X4 [Cucumis melo]	[more]
gi\|659086349\|ref\|XP_008443887.1\|	1.1e-169	100.00	PREDICTED: dicer-like protein 4 isoform X1 [Cucumis melo]	[more]
gi\|778660228\|ref\|XP_011655835.1\|	1.9e-161	95.39	PREDICTED: dicer-like protein 4 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR005034	Dicer_dimerisation_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:0048608	reproductive structure development
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0010492	maintenance of shoot apical meristem identity
biological_process	GO:0010216	maintenance of DNA methylation
biological_process	GO:0051214	RNA virus induced gene silencing
biological_process	GO:0010050	vegetative phase change
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0010599	production of lsiRNA involved in RNA interference
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010255T1	MELO3C010255T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 18..132 score: 8.6
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 45..135 score: 4.1
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 15..185 score: 14
IPR005034	Dicer dimerisation domain	PFAM	PF03368	Dicer_dimer	coord: 199..283 score: 3.1
IPR005034	Dicer dimerisation domain	PROFILE	PS51327	DICER_DSRBF	coord: 199..289 score: 26
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 13..158 score: 3.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..150 score: 4.07
None	No IPR available	PANTHER	PTHR14950	HELICASE-RELATED	coord: 1..308 score: 1.4E
None	No IPR available	PANTHER	PTHR14950:SF15	DICER-LIKE PROTEIN 4	coord: 1..308 score: 1.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C010255	CsGy1G017530	Cucumber (Gy14) v2	cgybmeB049

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C010255	Watermelon (97103) v2	mewmbB265
MELO3C010255	Wax gourd	mewgoB290
MELO3C010255	Melon (DHL92) v3.5.1	memeB111
MELO3C010255	Cucurbita moschata (Rifu)	cmomeB098
MELO3C010255	Cucumber (Gy14) v1	cgymeB212
MELO3C010255	Cucumber (Gy14) v1	cgymeB566
MELO3C010255	Cucurbita maxima (Rimu)	cmameB058
MELO3C010255	Cucurbita maxima (Rimu)	cmameB105
MELO3C010255	Cucurbita maxima (Rimu)	cmameB155
MELO3C010255	Cucurbita maxima (Rimu)	cmameB723
MELO3C010255	Cucurbita moschata (Rifu)	cmomeB049
MELO3C010255	Cucurbita moschata (Rifu)	cmomeB145
MELO3C010255	Cucurbita moschata (Rifu)	cmomeB714
MELO3C010255	Wild cucumber (PI 183967)	cpimeB057
MELO3C010255	Wild cucumber (PI 183967)	cpimeB109
MELO3C010255	Cucumber (Chinese Long) v2	cumeB057
MELO3C010255	Cucumber (Chinese Long) v2	cumeB109
MELO3C010255	Watermelon (Charleston Gray)	mewcgB258
MELO3C010255	Watermelon (97103) v1	mewmB293
MELO3C010255	Cucurbita pepo (Zucchini)	cpemeB087
MELO3C010255	Cucurbita pepo (Zucchini)	cpemeB334
MELO3C010255	Cucurbita pepo (Zucchini)	cpemeB621
MELO3C010255	Cucurbita pepo (Zucchini)	cpemeB750
MELO3C010255	Bottle gourd (USVL1VR-Ls)	lsimeB101
MELO3C010255	Bottle gourd (USVL1VR-Ls)	lsimeB399
MELO3C010255	Cucumber (Gy14) v2	cgybmeB094
MELO3C010255	Silver-seed gourd	carmeB0131
MELO3C010255	Silver-seed gourd	carmeB0256
MELO3C010255	Silver-seed gourd	carmeB0509
MELO3C010255	Silver-seed gourd	carmeB1041
MELO3C010255	Cucumber (Chinese Long) v3	cucmeB054
MELO3C010255	Cucumber (Chinese Long) v3	cucmeB115