MELO3C010157 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C010157
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionT27c4.14 protein isoform 3
Locationchr2 : 14092622 .. 14093317 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGAAGTTGTAAAGGTTCTTATGACCCATAACAGTGAGGAGGAGACGTGGAGTTGGCAGGCCCGTGATATATTACTTGATTCTTGGACAGCCCTCCTCATAGTACGTAGCAATCAATATTTGATAAATTGTCTTGTAATTTTATTAAGTTTGAACTTGTAGATCTTCATTACCAAGAACAATGCAGTCATGCTGTGATTGGATAAAGTTTGGCTAATCAATCTTCTTCATTAAGGAGAACAATATAATTATGCTGCCTTGATTCTTCTTCCAGTCTTCTTTCAAACACTAGGAGACGTCCTTCTAAAAGTTTTATCTTTAGATTGTCTTGTCCTAGTTTTTAGTGGACTGTGTCCTGTTTTGTCTCTCTTATGCCTCTCATGTTGTGTCTTTAATGCTAAAAGGTTTTGTTGACCATTGGCTTCCAGAAACACTATTGCTTGTGCTTGGTTGAAGATGAGTCACAGTTCTTAATTGGACGAATATTTATCTGTATATTTTAAATATTTCTAACATTGTATGATTTTGGAACTGATGGTAGCAATAAGTAGTCTAGATTGAGATTTCTTTTGCCCTTGTTCTCTTCAGCCATTAGAGAGGTGTGGTCAGAGTTCATTGCTTCCACAAGAAGGTATCAGCGCTGCTGCTAACTTGTTTGCTTTGATTGTGGAATCAGAGCTAAAAGGTGGTTAG

mRNA sequence

ATGGGTGAAGTTGTAAAGGTTCTTATGACCCATAACAGTGAGGAGGAGACGTGGAGTTGGCAGGCCCGTGATATATTACTTGATTCTTGGACAGCCCTCCTCATACCATTAGAGAGGTGTGGTCAGAGTTCATTGCTTCCACAAGAAGGTATCAGCGCTGCTGCTAACTTGTTTGCTTTGATTGTGGAATCAGAGCTAAAAGGTGGTTAG

Coding sequence (CDS)

ATGGGTGAAGTTGTAAAGGTTCTTATGACCCATAACAGTGAGGAGGAGACGTGGAGTTGGCAGGCCCGTGATATATTACTTGATTCTTGGACAGCCCTCCTCATACCATTAGAGAGGTGTGGTCAGAGTTCATTGCTTCCACAAGAAGGTATCAGCGCTGCTGCTAACTTGTTTGCTTTGATTGTGGAATCAGAGCTAAAAGGTGGTTAG

Protein sequence

MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFALIVESELKGG*
Homology
[Close]
BLAST of MELO3C010157 vs. TrEMBL
Match: A0A0A0M0V8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G680090 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 5.3e-29
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1   MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 60
           MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQ+SLLPQEGISAAANLFAL
Sbjct: 75  MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQNSLLPQEGISAAANLFAL 134

Query: 61  IVESELK 68
           IVESELK
Sbjct: 135 IVESELK 141

[Close]
BLAST of MELO3C010157 vs. TrEMBL
Match: A0A067JUS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23548 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.2e-19
Identity = 47/67 (70.15%), Postives = 59/67 (88.06%), Query Frame = 1 

Query: 1   MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 60
           M EV+KVLMT+N++EETWSW+ARDILLD+WT LL+P++  G + LLP EGI+AAANLFAL
Sbjct: 415 MCEVIKVLMTNNTDEETWSWEARDILLDTWTTLLVPMDGAGGNPLLPPEGINAAANLFAL 474

Query: 61  IVESELK 68
           I ESEL+
Sbjct: 475 IAESELR 481

[Close]
BLAST of MELO3C010157 vs. TrEMBL
Match: M5W570_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000522mg PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.8e-19
Identity = 48/67 (71.64%), Postives = 59/67 (88.06%), Query Frame = 1 

Query: 1   MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 60
           M EVVK LMT+NSEEETWSW+ARDILLD+WTALL+P+ R G ++LLP EG +A A+LFAL
Sbjct: 379 MSEVVKNLMTNNSEEETWSWEARDILLDTWTALLVPINRSGGNALLPAEGKNATASLFAL 438

Query: 61  IVESELK 68
           IV++ELK
Sbjct: 439 IVQAELK 445

[Close]
BLAST of MELO3C010157 vs. TrEMBL
Match: A0A061F2J1_THECC (T27c4.14 protein isoform 2 OS=Theobroma cacao GN=TCM_026187 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-18
Identity = 47/67 (70.15%), Postives = 58/67 (86.57%), Query Frame = 1 

Query: 1   MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 60
           M EVVKVLMT+N++EETWSW+ARDILLD+WT LL+P++  G  +LLP EG  AAANLF++
Sbjct: 421 MCEVVKVLMTNNTDEETWSWEARDILLDTWTILLVPMDSNGGDALLPPEGKHAAANLFSM 480

Query: 61  IVESELK 68
           IVESELK
Sbjct: 481 IVESELK 487

[Close]
BLAST of MELO3C010157 vs. TrEMBL
Match: A0A061F1H8_THECC (T27c4.14 protein isoform 1 OS=Theobroma cacao GN=TCM_026187 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-18
Identity = 47/67 (70.15%), Postives = 58/67 (86.57%), Query Frame = 1 

Query: 1   MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 60
           M EVVKVLMT+N++EETWSW+ARDILLD+WT LL+P++  G  +LLP EG  AAANLF++
Sbjct: 421 MCEVVKVLMTNNTDEETWSWEARDILLDTWTILLVPMDSNGGDALLPPEGKHAAANLFSM 480

Query: 61  IVESELK 68
           IVESELK
Sbjct: 481 IVESELK 487

[Close]
BLAST of MELO3C010157 vs. TAIR10
Match: AT3G04490.1 (AT3G04490.1 unknown protein)

HSP 1 Score: 91.3 bits (225), Expect = 2.6e-19
Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 1 

Query: 1   MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 60
           MGEVVKVLM ++++EETWS++ARDILLD+WT LL  ++  G ++ LP EGI AAA+LF+L
Sbjct: 424 MGEVVKVLMANSTDEETWSYEARDILLDTWTTLLTSMDGSGGNAWLPPEGIHAAASLFSL 483

Query: 61  IVESELK 68
           IVESELK
Sbjct: 484 IVESELK 490

[Close]
BLAST of MELO3C010157 vs. NCBI nr
Match: gi|659086148|ref|XP_008443788.1| (PREDICTED: exportin-4 isoform X1 [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 3.4e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1   MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 60
           MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL
Sbjct: 417 MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 476

Query: 61  IVESELK 68
           IVESELK
Sbjct: 477 IVESELK 483

[Close]
BLAST of MELO3C010157 vs. NCBI nr
Match: gi|659086150|ref|XP_008443789.1| (PREDICTED: exportin-4 isoform X2 [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 3.4e-29
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1   MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 60
           MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL
Sbjct: 314 MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 373

Query: 61  IVESELK 68
           IVESELK
Sbjct: 374 IVESELK 380

[Close]
BLAST of MELO3C010157 vs. NCBI nr
Match: gi|778664303|ref|XP_011660266.1| (PREDICTED: exportin-4 isoform X1 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 7.6e-29
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1   MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 60
           MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQ+SLLPQEGISAAANLFAL
Sbjct: 417 MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQNSLLPQEGISAAANLFAL 476

Query: 61  IVESELK 68
           IVESELK
Sbjct: 477 IVESELK 483

[Close]
BLAST of MELO3C010157 vs. NCBI nr
Match: gi|700211666|gb|KGN66762.1| (hypothetical protein Csa_1G680090 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 7.6e-29
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1   MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 60
           MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQ+SLLPQEGISAAANLFAL
Sbjct: 75  MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQNSLLPQEGISAAANLFAL 134

Query: 61  IVESELK 68
           IVESELK
Sbjct: 135 IVESELK 141

[Close]
BLAST of MELO3C010157 vs. NCBI nr
Match: gi|778664306|ref|XP_011660267.1| (PREDICTED: exportin-4 isoform X2 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 7.6e-29
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 1 

Query: 1   MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQSSLLPQEGISAAANLFAL 60
           MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQ+SLLPQEGISAAANLFAL
Sbjct: 314 MGEVVKVLMTHNSEEETWSWQARDILLDSWTALLIPLERCGQNSLLPQEGISAAANLFAL 373

Query: 61  IVESELK 68
           IVESELK
Sbjct: 374 IVESELK 380

The following BLAST results are available for this feature:
BLAST of MELO3C010157 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0V8_CUCSA5.3e-2998.51Uncharacterized protein OS=Cucumis sativus GN=Csa_1G680090 PE=4 SV=1[more]
A0A067JUS4_JATCU2.2e-1970.15Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23548 PE=4 SV=1[more]
M5W570_PRUPE3.8e-1971.64Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000522mg PE=4 SV=1[more]
A0A061F2J1_THECC1.9e-1870.15T27c4.14 protein isoform 2 OS=Theobroma cacao GN=TCM_026187 PE=4 SV=1[more]
A0A061F1H8_THECC1.9e-1870.15T27c4.14 protein isoform 1 OS=Theobroma cacao GN=TCM_026187 PE=4 SV=1[more]
BLAST of MELO3C010157 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04490.12.6e-1965.67 unknown protein[more]
BLAST of MELO3C010157 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659086148|ref|XP_008443788.1|3.4e-29100.00PREDICTED: exportin-4 isoform X1 [Cucumis melo][more]
gi|659086150|ref|XP_008443789.1|3.4e-29100.00PREDICTED: exportin-4 isoform X2 [Cucumis melo][more]
gi|778664303|ref|XP_011660266.1|7.6e-2998.51PREDICTED: exportin-4 isoform X1 [Cucumis sativus][more]
gi|700211666|gb|KGN66762.1|7.6e-2998.51hypothetical protein Csa_1G680090 [Cucumis sativus][more]
gi|778664306|ref|XP_011660267.1|7.6e-2998.51PREDICTED: exportin-4 isoform X2 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010157T1MELO3C010157T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C010157Csa1G680090Cucumber (Chinese Long) v2cumeB043
MELO3C010157CSPI01G33320Wild cucumber (PI 183967)cpimeB044
MELO3C010157Cucsa.291870Cucumber (Gy14) v1cgymeB485
MELO3C010157Lsi06G007770Bottle gourd (USVL1VR-Ls)lsimeB398
MELO3C010157CsGy1G032020Cucumber (Gy14) v2cgybmeB040
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010157Cucurbita maxima (Rimu)cmameB107
MELO3C010157Cucurbita moschata (Rifu)cmomeB099
MELO3C010157Wild cucumber (PI 183967)cpimeB057
MELO3C010157Cucumber (Chinese Long) v3cucmeB044