MELO3C010140 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C010140
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSentrin/sumospecific protease putative
Locationchr2 : 13740901 .. 13741233 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAAATGGGACATAACGCCGACAGGAAAATACCAGCTCTTTCCATACAACTTAAATGCGAAAGCCAGCATCTGGTTGGTATTTGTGAAGAAGAAGCTCACGCCTACTCACCATGATACCACCATCTCTATGGAAAGGATAATGTTAGTCTACTACATAATGGAGAAGCTTTTGGTGCACATAAGCAAGAGAATAAGCGAGCATATCATAGTTTGGGTTAAGCATCCTCATGGAGCGAGACACTTCCCGAACTTAATTGAGACATTGAGCTTAAATGCATGCTCGACGTTAGAAAAGCTTCCTCAAGTAGAAGTGAAGGATGAGGTTTAG

mRNA sequence

ATGACAAAATGGGACATAACGCCGACAGGAAAATACCAGCTCTTTCCATACAACTTAAATGCGAAAGCCAGCATCTGGTTGGTATTTGTGAAGAAGAAGCTCACGCCTACTCACCATGATACCACCATCTCTATGGAAAGGATAATGTTAGTCTACTACATAATGGAGAAGCTTTTGGTGCACATAAGCAAGAGAATAAGCGAGCATATCATAGTTTGGGTTAAGCATCCTCATGGAGCGAGACACTTCCCGAACTTAATTGAGACATTGAGCTTAAATGCATGCTCGACGTTAGAAAAGCTTCCTCAAGTAGAAGTGAAGGATGAGGTTTAG

Coding sequence (CDS)

ATGACAAAATGGGACATAACGCCGACAGGAAAATACCAGCTCTTTCCATACAACTTAAATGCGAAAGCCAGCATCTGGTTGGTATTTGTGAAGAAGAAGCTCACGCCTACTCACCATGATACCACCATCTCTATGGAAAGGATAATGTTAGTCTACTACATAATGGAGAAGCTTTTGGTGCACATAAGCAAGAGAATAAGCGAGCATATCATAGTTTGGGTTAAGCATCCTCATGGAGCGAGACACTTCCCGAACTTAATTGAGACATTGAGCTTAAATGCATGCTCGACGTTAGAAAAGCTTCCTCAAGTAGAAGTGAAGGATGAGGTTTAG

Protein sequence

MTKWDITPTGKYQLFPYNLNAKASIWLVFVKKKLTPTHHDTTISMERIMLVYYIMEKLLVHISKRISEHIIVWVKHPHGARHFPNLIETLSLNACSTLEKLPQVEVKDEV*
Homology
[Close]
BLAST of MELO3C010140 vs. TrEMBL
Match: A0A0A0LAN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.0e-23
Identity = 58/89 (65.17%), Postives = 67/89 (75.28%), Query Frame = 1 

Query: 22  KASIWLVFVKKKLTPTHHDTTISMERIMLVYYIMEKLLVHISKRISEHIIVWVKHPHGAR 81
           +  IWLV +KKK+ PT H +TISMER+MLVY IM+K+LV+I K IS HII  VKHP GAR
Sbjct: 25  RGCIWLVLIKKKIMPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGAR 84

Query: 82  HFPNLIETLSLNACSTLEKLPQVEVKDEV 111
            F  LIE L L AC  LEKLPQVEVKD +
Sbjct: 85  PFSYLIEQLCLRACLMLEKLPQVEVKDGI 113

[Close]
BLAST of MELO3C010140 vs. TrEMBL
Match: A0A0A0LAY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G511970 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.9e-22
Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = 1 

Query: 2   TKWDITPTGKYQL-----FPYNLNAKASIWLVFVKKKLTPTHHDTTISMERIMLVYYIME 61
           TKWD    G YQ+     F +N N  AS+WLVFVKKK+  T  D+TISM++IML+Y IME
Sbjct: 68  TKWDKMSIGTYQIRMGLIFLHNPNTDASVWLVFVKKKIMSTRPDSTISMDKIMLIYCIME 127

Query: 62  KLLVHISKRISEHIIVWVKHPHGARHFPNLIETLSLNACSTLEKLPQVEVKD 109
           ++ V++ + I +HI+ W+KHPH  R F +LIE L L AC T +K  Q++V+D
Sbjct: 128 EIPVNVGEIICKHILAWIKHPHDGRPFLHLIEKLCLKACLT-KKESQIKVED 178

[Close]
BLAST of MELO3C010140 vs. TrEMBL
Match: A0A0A0L2P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G569710 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.6e-16
Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 2  TKWDITPTGKYQLFPYNLNAKASIWLVFVKKKLTPTHHDTTISMERIMLVYYIMEKLLVH 61
          T  DITPTGKYQL P+NLN +A IWLVFVKKK+ PT HD  ISMER+MLVY IM+++LV 
Sbjct: 30 TMLDITPTGKYQLLPHNLNTEAIIWLVFVKKKIMPTRHDNNISMERVMLVYCIMKEILVE 89

Query: 62 ISKRI 67
          +   I
Sbjct: 90 VKDGI 94

[Close]
BLAST of MELO3C010140 vs. TrEMBL
Match: A0A0A0LHW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145890 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.3e-10
Identity = 38/66 (57.58%), Postives = 46/66 (69.70%), Query Frame = 1 

Query: 45  MERIMLVYYIMEKLLVHISKRISEHIIVWVKHPHGARHFPNLIETLSLNACSTLEKLPQV 104
           MERIM  Y IM+++ V+I K ISEHI+ WVK P   R F +LI  L L AC  LEKLPQV
Sbjct: 1   MERIMFDYCIMKEISVNIGKIISEHILAWVKLPQETRFFLHLINKLRLKACLALEKLPQV 60

Query: 105 EVKDEV 111
           +V+D V
Sbjct: 61  KVEDGV 66

[Close]
BLAST of MELO3C010140 vs. NCBI nr
Match: gi|700202594|gb|KGN57727.1| (hypothetical protein Csa_3G263250 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 5.8e-23
Identity = 58/89 (65.17%), Postives = 67/89 (75.28%), Query Frame = 1 

Query: 22  KASIWLVFVKKKLTPTHHDTTISMERIMLVYYIMEKLLVHISKRISEHIIVWVKHPHGAR 81
           +  IWLV +KKK+ PT H +TISMER+MLVY IM+K+LV+I K IS HII  VKHP GAR
Sbjct: 25  RGCIWLVLIKKKIMPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGAR 84

Query: 82  HFPNLIETLSLNACSTLEKLPQVEVKDEV 111
            F  LIE L L AC  LEKLPQVEVKD +
Sbjct: 85  PFSYLIEQLCLRACLMLEKLPQVEVKDGI 113

[Close]
BLAST of MELO3C010140 vs. NCBI nr
Match: gi|700202971|gb|KGN58104.1| (hypothetical protein Csa_3G511970 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-21
Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = 1 

Query: 2   TKWDITPTGKYQL-----FPYNLNAKASIWLVFVKKKLTPTHHDTTISMERIMLVYYIME 61
           TKWD    G YQ+     F +N N  AS+WLVFVKKK+  T  D+TISM++IML+Y IME
Sbjct: 68  TKWDKMSIGTYQIRMGLIFLHNPNTDASVWLVFVKKKIMSTRPDSTISMDKIMLIYCIME 127

Query: 62  KLLVHISKRISEHIIVWVKHPHGARHFPNLIETLSLNACSTLEKLPQVEVKD 109
           ++ V++ + I +HI+ W+KHPH  R F +LIE L L AC T +K  Q++V+D
Sbjct: 128 EIPVNVGEIICKHILAWIKHPHDGRPFLHLIEKLCLKACLT-KKESQIKVED 178

[Close]
BLAST of MELO3C010140 vs. NCBI nr
Match: gi|700199714|gb|KGN54872.1| (hypothetical protein Csa_4G569710 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 5.2e-16
Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 2  TKWDITPTGKYQLFPYNLNAKASIWLVFVKKKLTPTHHDTTISMERIMLVYYIMEKLLVH 61
          T  DITPTGKYQL P+NLN +A IWLVFVKKK+ PT HD  ISMER+MLVY IM+++LV 
Sbjct: 30 TMLDITPTGKYQLLPHNLNTEAIIWLVFVKKKIMPTRHDNNISMERVMLVYCIMKEILVE 89

Query: 62 ISKRI 67
          +   I
Sbjct: 90 VKDGI 94

[Close]
BLAST of MELO3C010140 vs. NCBI nr
Match: gi|700206371|gb|KGN61490.1| (hypothetical protein Csa_2G145890 [Cucumis sativus])

HSP 1 Score: 73.2 bits (178), Expect = 3.3e-10
Identity = 38/66 (57.58%), Postives = 46/66 (69.70%), Query Frame = 1 

Query: 45  MERIMLVYYIMEKLLVHISKRISEHIIVWVKHPHGARHFPNLIETLSLNACSTLEKLPQV 104
           MERIM  Y IM+++ V+I K ISEHI+ WVK P   R F +LI  L L AC  LEKLPQV
Sbjct: 1   MERIMFDYCIMKEISVNIGKIISEHILAWVKLPQETRFFLHLINKLRLKACLALEKLPQV 60

Query: 105 EVKDEV 111
           +V+D V
Sbjct: 61  KVEDGV 66

The following BLAST results are available for this feature:
BLAST of MELO3C010140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAN0_CUCSA4.0e-2365.17Uncharacterized protein OS=Cucumis sativus GN=Csa_3G263250 PE=4 SV=1[more]
A0A0A0LAY9_CUCSA9.9e-2250.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G511970 PE=4 SV=1[more]
A0A0A0L2P0_CUCSA3.6e-1666.15Uncharacterized protein OS=Cucumis sativus GN=Csa_4G569710 PE=4 SV=1[more]
A0A0A0LHW9_CUCSA2.3e-1057.58Uncharacterized protein OS=Cucumis sativus GN=Csa_2G145890 PE=4 SV=1[more]
BLAST of MELO3C010140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202594|gb|KGN57727.1|5.8e-2365.17hypothetical protein Csa_3G263250 [Cucumis sativus][more]
gi|700202971|gb|KGN58104.1|1.4e-2150.00hypothetical protein Csa_3G511970 [Cucumis sativus][more]
gi|700199714|gb|KGN54872.1|5.2e-1666.15hypothetical protein Csa_4G569710 [Cucumis sativus][more]
gi|700206371|gb|KGN61490.1|3.3e-1057.58hypothetical protein Csa_2G145890 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010140T1MELO3C010140T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010140Bottle gourd (USVL1VR-Ls)lsimeB398
MELO3C010140Cucumber (Gy14) v2cgybmeB040
MELO3C010140Cucumber (Chinese Long) v3cucmeB044
MELO3C010140Cucumber (Gy14) v1cgymeB651
MELO3C010140Cucurbita maxima (Rimu)cmameB072
MELO3C010140Cucurbita maxima (Rimu)cmameB107
MELO3C010140Cucurbita moschata (Rifu)cmomeB065
MELO3C010140Cucurbita moschata (Rifu)cmomeB099
MELO3C010140Wild cucumber (PI 183967)cpimeB044
MELO3C010140Cucumber (Chinese Long) v2cumeB043
MELO3C010140Watermelon (97103) v1mewmB270