MELO3C010130.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C010130.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionFimbrin-like family protein
Locationchr02 : 14328218 .. 14328489 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGTTTAAAAATGTCATTTGTAAAAATGATGACCGATGATGCCCAAACTTTGCAGAAAGAGCGGTGCTTCCGGTTGTGGGTCAATAGTCTTGGCATAGCCACATATGTCAACAATGTCTTTGAGAATGTGAGAAACGGGTATTATTTTTTGTTTTACTTTAACTTATGAATCAACTGTATATTGTCCTTTTTTTTTACAAGCTTAAGATACGACGTCCATATTATAGATGGGTTCTTTTGGAAGTTCTTGACAAAGTTTTTCCTTGA

mRNA sequence

ATGGATAGTTTAAAAATGTCATTTGTAAAAATGATGACCGATGATGCCCAAACTTTGCAGAAAGAGCGGTGCTTCCGGTTGTGGGTCAATAGTCTTGGCATAGCCACATATGTCAACAATGTCTTTGAGAATGTGAGAAACGGATGGGTTCTTTTGGAAGTTCTTGACAAAGTTTTTCCTTGA

Coding sequence (CDS)

ATGGATAGTTTAAAAATGTCATTTGTAAAAATGATGACCGATGATGCCCAAACTTTGCAGAAAGAGCGGTGCTTCCGGTTGTGGGTCAATAGTCTTGGCATAGCCACATATGTCAACAATGTCTTTGAGAATGTGAGAAACGGATGGGTTCTTTTGGAAGTTCTTGACAAAGTTTTTCCTTGA

Protein sequence

MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP
BLAST of MELO3C010130.2 vs. NCBI nr
Match: XP_004144532.1 (PREDICTED: fimbrin-5 [Cucumis sativus] >KGN43448.1 hypothetical protein Csa_7G037520 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 9.7e-21
Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 0

Query: 1   MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 60
           +DS KMSF +MMTDDAQT ++ERCFRLW+NSLGIATYVNNVFE+VRNGWVLLEVLDKV P
Sbjct: 374 VDSSKMSFAEMMTDDAQTSREERCFRLWINSLGIATYVNNVFEDVRNGWVLLEVLDKVSP 433

BLAST of MELO3C010130.2 vs. NCBI nr
Match: XP_008455508.1 (PREDICTED: fimbrin-5 [Cucumis melo] >XP_016901751.1 PREDICTED: fimbrin-5 [Cucumis melo] >XP_016901752.1 PREDICTED: fimbrin-5 [Cucumis melo])

HSP 1 Score: 108.2 bits (269), Expect = 9.7e-21
Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 0

Query: 1   MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 60
           +DS KMSF +MMTDDAQT ++ERCFRLW+NSLGIATYVNNVFE+VRNGWVLLEVLDKV P
Sbjct: 374 VDSSKMSFAEMMTDDAQTSREERCFRLWINSLGIATYVNNVFEDVRNGWVLLEVLDKVSP 433

BLAST of MELO3C010130.2 vs. NCBI nr
Match: XP_007142522.1 (hypothetical protein PHAVU_008G287800g [Phaseolus vulgaris] >ESW14516.1 hypothetical protein PHAVU_008G287800g [Phaseolus vulgaris])

HSP 1 Score: 107.1 bits (266), Expect = 2.2e-20
Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 0

Query: 1   MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 60
           +DS KMSF +MMTDDA+T ++ERCFRLW+NSLGIATYVNNVFE+VRNGWVLLEVLDKV P
Sbjct: 375 VDSQKMSFAEMMTDDAETSREERCFRLWINSLGIATYVNNVFEDVRNGWVLLEVLDKVSP 434

BLAST of MELO3C010130.2 vs. NCBI nr
Match: XP_003545629.2 (fimbrin-5 [Glycine max] >KRH14073.1 hypothetical protein GLYMA_14G005200 [Glycine max])

HSP 1 Score: 107.1 bits (266), Expect = 2.2e-20
Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 0

Query: 1   MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 60
           +DS KMSF +MMTDDA+T ++ERCFRLW+NSLGIATYVNNVFE+VRNGWVLLEVLDKV P
Sbjct: 394 VDSQKMSFAEMMTDDAETSREERCFRLWINSLGIATYVNNVFEDVRNGWVLLEVLDKVSP 453

BLAST of MELO3C010130.2 vs. NCBI nr
Match: KHN46900.1 (Fimbrin-like protein 2 [Glycine soja])

HSP 1 Score: 107.1 bits (266), Expect = 2.2e-20
Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 0

Query: 1   MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 60
           +DS KMSF +MMTDDA+T ++ERCFRLW+NSLGIATYVNNVFE+VRNGWVLLEVLDKV P
Sbjct: 375 VDSQKMSFAEMMTDDAETSREERCFRLWINSLGIATYVNNVFEDVRNGWVLLEVLDKVSP 434

BLAST of MELO3C010130.2 vs. TAIR10
Match: AT5G35700.1 (fimbrin-like protein 2)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-21
Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 0

Query: 1   MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 60
           +D  K SF +MMTDD +T ++ERCFRLW+NSLG ATYVNNVFE++RNGWVLLEVLDKV P
Sbjct: 374 VDDSKTSFAEMMTDDVETSREERCFRLWINSLGTATYVNNVFEDLRNGWVLLEVLDKVSP 433

BLAST of MELO3C010130.2 vs. TAIR10
Match: AT5G55400.1 (Actin binding Calponin homology (CH) domain-containing protein)

HSP 1 Score: 94.0 bits (232), Expect = 3.4e-20
Identity = 39/56 (69.64%), Postives = 50/56 (89.29%), Query Frame = 0

Query: 5   KMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 61
           + SF +MMT+D QT + ERC+RLW+NSLGI +YVNNVFE+VRNGW+LLEV+DKV+P
Sbjct: 379 RFSFAEMMTEDLQTCRDERCYRLWINSLGIESYVNNVFEDVRNGWILLEVVDKVYP 434

BLAST of MELO3C010130.2 vs. TAIR10
Match: AT4G26700.1 (fimbrin 1)

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-19
Identity = 39/56 (69.64%), Postives = 49/56 (87.50%), Query Frame = 0

Query: 5   KMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 61
           K +F +MMT+D +T + ERC+RLW+NSLGI +YVNNVFE+VRNGW+LLEVLDKV P
Sbjct: 378 KYAFAEMMTEDVETCRDERCYRLWINSLGIDSYVNNVFEDVRNGWILLEVLDKVSP 433

BLAST of MELO3C010130.2 vs. TAIR10
Match: AT2G04750.1 (Actin binding Calponin homology (CH) domain-containing protein)

HSP 1 Score: 84.0 bits (206), Expect = 3.5e-17
Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 0

Query: 6   MSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 61
           +S  +M+T+D +T ++ERCFR W+NSLG  TYV+NVFE+VRNGWVLLEVLDKV P
Sbjct: 375 ISVAEMVTEDEETSREERCFRHWMNSLGAVTYVDNVFEDVRNGWVLLEVLDKVSP 429

BLAST of MELO3C010130.2 vs. TAIR10
Match: AT5G48460.1 (Actin binding Calponin homology (CH) domain-containing protein)

HSP 1 Score: 69.3 bits (168), Expect = 9.0e-13
Identity = 27/56 (48.21%), Postives = 43/56 (76.79%), Query Frame = 0

Query: 5   KMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 61
           ++SF++ + DD Q  ++E+ FR W+NS   + Y+NNVFE++R+GW+LL+ LDKV P
Sbjct: 380 QISFLENLADDIQISREEKAFRFWINSFDGSVYINNVFEDLRDGWILLQTLDKVSP 435

BLAST of MELO3C010130.2 vs. Swiss-Prot
Match: sp|Q9FKI0|FIMB5_ARATH (Fimbrin-5 OS=Arabidopsis thaliana OX=3702 GN=FIM5 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.5e-20
Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 0

Query: 1   MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 60
           +D  K SF +MMTDD +T ++ERCFRLW+NSLG ATYVNNVFE++RNGWVLLEVLDKV P
Sbjct: 374 VDDSKTSFAEMMTDDVETSREERCFRLWINSLGTATYVNNVFEDLRNGWVLLEVLDKVSP 433

BLAST of MELO3C010130.2 vs. Swiss-Prot
Match: sp|Q9FJ70|FIMB3_ARATH (Fimbrin-3 OS=Arabidopsis thaliana OX=3702 GN=FIM3 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 6.2e-19
Identity = 39/56 (69.64%), Postives = 50/56 (89.29%), Query Frame = 0

Query: 5   KMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 61
           + SF +MMT+D QT + ERC+RLW+NSLGI +YVNNVFE+VRNGW+LLEV+DKV+P
Sbjct: 379 RFSFAEMMTEDLQTCRDERCYRLWINSLGIESYVNNVFEDVRNGWILLEVVDKVYP 434

BLAST of MELO3C010130.2 vs. Swiss-Prot
Match: sp|Q7G188|FIMB1_ARATH (Fimbrin-1 OS=Arabidopsis thaliana OX=3702 GN=FIM1 PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 3.1e-18
Identity = 39/56 (69.64%), Postives = 49/56 (87.50%), Query Frame = 0

Query: 5   KMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 61
           K +F +MMT+D +T + ERC+RLW+NSLGI +YVNNVFE+VRNGW+LLEVLDKV P
Sbjct: 378 KYAFAEMMTEDVETCRDERCYRLWINSLGIDSYVNNVFEDVRNGWILLEVLDKVSP 433

BLAST of MELO3C010130.2 vs. Swiss-Prot
Match: sp|Q9SJ84|FIMB4_ARATH (Fimbrin-4 OS=Arabidopsis thaliana OX=3702 GN=FIM4 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.4e-16
Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 0

Query: 6   MSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 61
           +S  +M+T+D +T ++ERCFR W+NSLG  TYV+NVFE+VRNGWVLLEVLDKV P
Sbjct: 375 ISVAEMVTEDEETSREERCFRHWMNSLGAVTYVDNVFEDVRNGWVLLEVLDKVSP 429

BLAST of MELO3C010130.2 vs. Swiss-Prot
Match: sp|O50064|FIMB2_ARATH (Fimbrin-2 OS=Arabidopsis thaliana OX=3702 GN=FIM2 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.6e-11
Identity = 27/56 (48.21%), Postives = 43/56 (76.79%), Query Frame = 0

Query: 5   KMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 61
           ++SF++ + DD Q  ++E+ FR W+NS   + Y+NNVFE++R+GW+LL+ LDKV P
Sbjct: 380 QISFLENLADDIQISREEKAFRFWINSFDGSVYINNVFEDLRDGWILLQTLDKVSP 435

BLAST of MELO3C010130.2 vs. TrEMBL
Match: tr|A0A1S4E0J8|A0A1S4E0J8_CUCME (fimbrin-5 OS=Cucumis melo OX=3656 GN=LOC103495662 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.4e-21
Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 0

Query: 1   MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 60
           +DS KMSF +MMTDDAQT ++ERCFRLW+NSLGIATYVNNVFE+VRNGWVLLEVLDKV P
Sbjct: 374 VDSSKMSFAEMMTDDAQTSREERCFRLWINSLGIATYVNNVFEDVRNGWVLLEVLDKVSP 433

BLAST of MELO3C010130.2 vs. TrEMBL
Match: tr|A0A0A0K1W9|A0A0A0K1W9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037520 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.4e-21
Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 0

Query: 1   MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 60
           +DS KMSF +MMTDDAQT ++ERCFRLW+NSLGIATYVNNVFE+VRNGWVLLEVLDKV P
Sbjct: 374 VDSSKMSFAEMMTDDAQTSREERCFRLWINSLGIATYVNNVFEDVRNGWVLLEVLDKVSP 433

BLAST of MELO3C010130.2 vs. TrEMBL
Match: tr|I1M675|I1M675_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100818651 PE=4 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-20
Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 0

Query: 1   MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 60
           +DS KMSF +MMTDDA+T ++ERCFRLW+NSLGIATYVNNVFE+VRNGWVLLEVLDKV P
Sbjct: 394 VDSQKMSFAEMMTDDAETSREERCFRLWINSLGIATYVNNVFEDVRNGWVLLEVLDKVSP 453

BLAST of MELO3C010130.2 vs. TrEMBL
Match: tr|A0A0B2SPQ5|A0A0B2SPQ5_GLYSO (Fimbrin-like protein 2 OS=Glycine soja OX=3848 GN=glysoja_031200 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-20
Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 0

Query: 1   MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 60
           +DS KMSF +MMTDDA+T ++ERCFRLW+NSLGIATYVNNVFE+VRNGWVLLEVLDKV P
Sbjct: 375 VDSQKMSFAEMMTDDAETSREERCFRLWINSLGIATYVNNVFEDVRNGWVLLEVLDKVSP 434

BLAST of MELO3C010130.2 vs. TrEMBL
Match: tr|V7BDG6|V7BDG6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G287800g PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-20
Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 0

Query: 1   MDSLKMSFVKMMTDDAQTLQKERCFRLWVNSLGIATYVNNVFENVRNGWVLLEVLDKVFP 60
           +DS KMSF +MMTDDA+T ++ERCFRLW+NSLGIATYVNNVFE+VRNGWVLLEVLDKV P
Sbjct: 375 VDSQKMSFAEMMTDDAETSREERCFRLWINSLGIATYVNNVFEDVRNGWVLLEVLDKVSP 434

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004144532.19.7e-2183.33PREDICTED: fimbrin-5 [Cucumis sativus] >KGN43448.1 hypothetical protein Csa_7G03... [more]
XP_008455508.19.7e-2183.33PREDICTED: fimbrin-5 [Cucumis melo] >XP_016901751.1 PREDICTED: fimbrin-5 [Cucumi... [more]
XP_007142522.12.2e-2081.67hypothetical protein PHAVU_008G287800g [Phaseolus vulgaris] >ESW14516.1 hypothet... [more]
XP_003545629.22.2e-2081.67fimbrin-5 [Glycine max] >KRH14073.1 hypothetical protein GLYMA_14G005200 [Glycin... [more]
KHN46900.12.2e-2081.67Fimbrin-like protein 2 [Glycine soja][more]
Match NameE-valueIdentityDescription
AT5G35700.11.4e-2173.33fimbrin-like protein 2[more]
AT5G55400.13.4e-2069.64Actin binding Calponin homology (CH) domain-containing protein[more]
AT4G26700.11.7e-1969.64fimbrin 1[more]
AT2G04750.13.5e-1767.27Actin binding Calponin homology (CH) domain-containing protein[more]
AT5G48460.19.0e-1348.21Actin binding Calponin homology (CH) domain-containing protein[more]
Match NameE-valueIdentityDescription
sp|Q9FKI0|FIMB5_ARATH2.5e-2073.33Fimbrin-5 OS=Arabidopsis thaliana OX=3702 GN=FIM5 PE=1 SV=1[more]
sp|Q9FJ70|FIMB3_ARATH6.2e-1969.64Fimbrin-3 OS=Arabidopsis thaliana OX=3702 GN=FIM3 PE=3 SV=1[more]
sp|Q7G188|FIMB1_ARATH3.1e-1869.64Fimbrin-1 OS=Arabidopsis thaliana OX=3702 GN=FIM1 PE=1 SV=2[more]
sp|Q9SJ84|FIMB4_ARATH6.4e-1667.27Fimbrin-4 OS=Arabidopsis thaliana OX=3702 GN=FIM4 PE=3 SV=1[more]
sp|O50064|FIMB2_ARATH1.6e-1148.21Fimbrin-2 OS=Arabidopsis thaliana OX=3702 GN=FIM2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A1S4E0J8|A0A1S4E0J8_CUCME6.4e-2183.33fimbrin-5 OS=Cucumis melo OX=3656 GN=LOC103495662 PE=4 SV=1[more]
tr|A0A0A0K1W9|A0A0A0K1W9_CUCSA6.4e-2183.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037520 PE=4 SV=1[more]
tr|I1M675|I1M675_SOYBN1.4e-2081.67Uncharacterized protein OS=Glycine max OX=3847 GN=100818651 PE=4 SV=2[more]
tr|A0A0B2SPQ5|A0A0B2SPQ5_GLYSO1.4e-2081.67Fimbrin-like protein 2 OS=Glycine soja OX=3848 GN=glysoja_031200 PE=4 SV=1[more]
tr|V7BDG6|V7BDG6_PHAVU1.4e-2081.67Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G287800g PE=4 ... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036872CH_dom_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051764 actin crosslink formation
biological_process GO:0051017 actin filament bundle assembly
biological_process GO:0051639 actin filament network formation
cellular_component GO:0005884 actin filament
cellular_component GO:0032432 actin filament bundle
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003779 actin binding
molecular_function GO:0051015 actin filament binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010130.2.1MELO3C010130.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036872CH domain superfamilyGENE3DG3DSA:1.10.418.10coord: 15..60
e-value: 2.3E-7
score: 32.8
IPR036872CH domain superfamilySUPERFAMILYSSF47576Calponin-homology domain, CH-domaincoord: 7..59
NoneNo IPR availablePANTHERPTHR19961:SF37FIMBRIN-1-RELATEDcoord: 2..60
NoneNo IPR availablePANTHERPTHR19961FIMBRIN/PLASTINcoord: 2..60

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None