MELO3C010123 (gene) Melon (DHL92) v3.5.1

NameMELO3C010123
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSulfite reductase [NADPH] hemoprotein beta-component
Locationchr2 : 13361996 .. 13362369 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTTTAATGATAAAGAGATTAAGTTCAACGTTGTCAACACGATGAAGTTCTCCGCTGATGCTGAGAACTACAGCGCGATAGCCTTGGATGGAACTATAGTAAGGAAGAAGCCTACTATTAGCTGTTTAGAACTAAAGAATTCCTTGAGGAAGATGAACGAGATTATACTAGACGAACTTAATGCCATGTTTGACGAATTGAAGTTCGAACCTTTGGATCTGCAAACCAAAGGCGAAAAGAAGACAAAGTCATCAATTGGAGAACCACCAGAATTAGAGCTGAAACTTTTGCCGAACCACCTAAAGTGTGTATATTTGGGGGAGAATGACACTCTACCCGTCATCATTTCTACCCACTTAGAAGGTGATAG

mRNA sequence

ATGCATTTTAATGATAAAGAGATTAAGTTCAACGTTGTCAACACGATGAAGTTCTCCGCTGATGCTGAGAACTACAGCGCGATAGCCTTGGATGGAACTATAGTAAGGAAGAAGCCTACTATTAGCTGTTTAGAACTAAAGAATTCCTTGAGGAAGATGAACGAGATTATACTAGACGAACTTAATGCCATGTTTGACGAATTGAAGTTCGAACCTTTGGATCTGCAAACCAAAGGCGAAAAGAAGACAAAGTCATCAATTGGAGAACCACCAGAATTAGAGCTGAAACTTTTGCCGAACCACCTAAAGTGTGTATATTTGGGGGAGAATGACACTCTACCCGTCATCATTTCTACCCACTTAGAAGGTGATAG

Coding sequence (CDS)

ATGCATTTTAATGATAAAGAGATTAAGTTCAACGTTGTCAACACGATGAAGTTCTCCGCTGATGCTGAGAACTACAGCGCGATAGCCTTGGATGGAACTATAGTAAGGAAGAAGCCTACTATTAGCTGTTTAGAACTAAAGAATTCCTTGAGGAAGATGAACGAGATTATACTAGACGAACTTAATGCCATGTTTGACGAATTGAAGTTCGAACCTTTGGATCTGCAAACCAAAGGCGAAAAGAAGACAAAGTCATCAATTGGAGAACCACCAGAATTAGAGCTGAAACTTTTGCCGAACCACCTAAAGTGTGTATATTTGGGGGAGAATGACACTCTACCCGTCATCATTTCTACCCACTTAGAAGGTGATAG

Protein sequence

MHFNDKEIKFNVVNTMKFSADAENYSAIALDGTIVRKKPTISCLELKNSLRKMNEIILDELNAMFDELKFEPLDLQTKGEKKTKSSIGEPPELELKLLPNHLKCVYLGENDTLPVIISTHLEGD
BLAST of MELO3C010123 vs. TrEMBL
Match: M1DH28_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400038510 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.0e-08
Identity = 45/134 (33.58%), Postives = 67/134 (50.00%), Query Frame = 1

Query: 4   NDKEIKFNVVNTMKFSADAENYSAIALD-----GTIVRKKPTISCLE--LKNSLRKMNEI 63
           N +E+ FN+  +MK   D    SA+ +      G  +  K  +  L   L N        
Sbjct: 143 NKEEVNFNICRSMKQPQDMNVLSAMEVFDEEEIGPTIEDKLAVETLAVVLMNFETDFRSD 202

Query: 64  ILDELNAMFD--ELKFEP----LDLQTKGEKKTKSSIGEPPELELKLLPNHLKCVYLGEN 123
            ++ +NA+    E  + P    LDL+ +    TK S+ EPP LELK LPNHL+ V+ G N
Sbjct: 203 YVETVNALHGNGEHSYAPKKLNLDLKNRPSPPTKPSLEEPPVLELKQLPNHLRYVFFGTN 262

Query: 124 DTLPVIISTHLEGD 125
           +TLPVI++  L  +
Sbjct: 263 NTLPVILAADLNDE 276

BLAST of MELO3C010123 vs. TrEMBL
Match: Q2AA50_ASPOF (Retrotransposon gag protein OS=Asparagus officinalis GN=19.t00014 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.8e-06
Identity = 34/80 (42.50%), Postives = 52/80 (65.00%), Query Frame = 1

Query: 54  NEIILDELNAMFDELKFEPL------------DLQTKGEKKTKSSIGEPPELELKLLPNH 113
           ++I+++EL+   DEL+ EPL             L+T+   + + S+ EPP+LELK LP +
Sbjct: 710 SDIMIEELSD--DELEIEPLINHVFSVGWQREPLETEPRVQLRPSVEEPPKLELKPLPEN 769

Query: 114 LKCVYLGENDTLPVIISTHL 122
           L+  YLGEN++LPVIIS+ L
Sbjct: 770 LEYAYLGENESLPVIISSEL 787

BLAST of MELO3C010123 vs. TrEMBL
Match: Q0KIP7_SOLDE (Integrase core domain containing protein OS=Solanum demissum GN=SDM1_41t00009 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.5e-06
Identity = 42/130 (32.31%), Postives = 65/130 (50.00%), Query Frame = 1

Query: 4   NDKEIKFNVVNTMKFSADAENYSA---IALDGTIVRKKPTISCLELKNSLRKMNEIIL-- 63
           N +EI FN+  +MK  ++ ++ S    I   G+ V  +  +    L+  L       +  
Sbjct: 445 NIEEINFNICRSMKQGSELQSVSVVNHIEEGGSTVPIEERLGVDALEAVLMNFESDGIED 504

Query: 64  -DELNAMFDELKFEP------LDLQTKGEKKTKSSIGEPPELELKLLPNHLKCVYLGEND 122
            DEL A  D  +F        LD++ +     + S+ E P+LELK LP+HL+ V+LG + 
Sbjct: 505 YDELVAALDRFEFRSKRKRLELDIKNRDSPPARPSVEEAPKLELKALPSHLRYVFLGRDG 564

BLAST of MELO3C010123 vs. NCBI nr
Match: gi|698566272|ref|XP_009773461.1| (PREDICTED: uncharacterized protein LOC104223691, partial [Nicotiana sylvestris])

HSP 1 Score: 75.5 bits (184), Expect = 7.4e-11
Identity = 53/133 (39.85%), Postives = 71/133 (53.38%), Query Frame = 1

Query: 1   MHFNDKEIKFNVVNTMKFSADAENYSAIALDGTIVR--------KKPTISCLELKNSLR- 60
           M  ND+EI FNV  +M+  ++  N+S +     IV+        + P  +CL     +  
Sbjct: 240 MRLNDEEIIFNVQKSMRRPSEFANFSLLDAVDVIVQSDDEVLTIEDPIAACLMNLEEVNG 299

Query: 61  -KMNEIILDELNAMFDE--LKFEPLDLQTKGEKKTKSSIGEPPELELKLLPNHLKCVYLG 120
             M E +L      F E  L+FEPL L+ +     K SI EPP+LELK LP HLK  +LG
Sbjct: 300 EDMAEWVLSLEGRGFWERNLEFEPLHLEKRETPPAKPSIEEPPKLELKPLPGHLKYEFLG 359

Query: 121 ENDTLPVIISTHL 122
            N TLPVIIS+ L
Sbjct: 360 PNSTLPVIISSGL 372

BLAST of MELO3C010123 vs. NCBI nr
Match: gi|698428605|ref|XP_009789994.1| (PREDICTED: uncharacterized protein LOC104237528 [Nicotiana sylvestris])

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-10
Identity = 53/136 (38.97%), Postives = 72/136 (52.94%), Query Frame = 1

Query: 1   MHFNDKEIKFNVVNTMKFSADAENYSAIAL--------DGTIVRKKPTISCLELKNSLRK 60
           M  ND+E+ FNV  +M+  ++  N S + +        D T+  K P  +C     +L  
Sbjct: 122 MRLNDEEVIFNVQQSMRRPSEYANCSLMEVVDVILHEDDDTLNAKDPLGACW---TNLED 181

Query: 61  MNEIILDELNAMFD-------ELKFEPLDLQTKGEKKTKSSIGEPPELELKLLPNHLKCV 120
           M+   L E     +       EL+FEPLDL+ K    +K SI E P+LELK LP HLK  
Sbjct: 182 MDGEGLAEWVMALEGQRFWKRELQFEPLDLKKKATPPSKPSIEELPQLELKPLPAHLKYA 241

Query: 121 YLGENDTLPVIISTHL 122
           +LG N TLPVIIS+ L
Sbjct: 242 FLGPNSTLPVIISSGL 254

BLAST of MELO3C010123 vs. NCBI nr
Match: gi|698551310|ref|XP_009769267.1| (PREDICTED: uncharacterized protein LOC104220148, partial [Nicotiana sylvestris])

HSP 1 Score: 72.4 bits (176), Expect = 6.3e-10
Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 1

Query: 1   MHFNDKEIKFNVVNTMKFSADAENYSAIALDGTIVRKKPTISCLE--LKNSLRKMNEIIL 60
           M  ND+EI FNV  +M+  ++  N S I     IV+    +  +E  L   L  + E+  
Sbjct: 426 MRLNDEEIIFNVQKSMRRPSEFANCSLIDAVDVIVQSDDEVLTIEDPLAACLTNLEEVNG 485

Query: 61  DEL---------NAMFD-ELKFEPLDLQTKGEKKTKSSIGEPPELELKLLPNHLKCVYLG 120
           ++L            +D EL+FEPL L  +     K SI EPP+LELK LP H++  +LG
Sbjct: 486 EDLAEWVLALEGRGFWDRELEFEPLHLGKRETPPAKPSIEEPPKLELKPLPTHIRYEFLG 545

Query: 121 ENDTLPVIISTHL 122
            + TLPVIIS+ L
Sbjct: 546 PDSTLPVIISSGL 558

BLAST of MELO3C010123 vs. NCBI nr
Match: gi|698514660|ref|XP_009802198.1| (PREDICTED: uncharacterized protein LOC104247794 [Nicotiana sylvestris])

HSP 1 Score: 72.4 bits (176), Expect = 6.3e-10
Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 1

Query: 1   MHFNDKEIKFNVVNTMKFSADAENYSAIALDGTIVRKKPTISCLE--LKNSLRKMNEIIL 60
           M  ND+EI FNV   M+  ++  N S I +   IV+    +  +E  L   L  + E+  
Sbjct: 153 MRLNDEEIIFNVQKYMRHPSEFANCSLIDVVDVIVQSDDEVLTIEDPLAACLTNLEEVNG 212

Query: 61  DEL---------NAMFD-ELKFEPLDLQTKGEKKTKSSIGEPPELELKLLPNHLKCVYLG 120
           ++L            +D EL+F+PL L  +     K SI EPP+LELK LP HL+  +LG
Sbjct: 213 EDLAEWVLALEGRGFWDRELEFDPLHLGKRETPPAKPSIEEPPKLELKPLPTHLRYEFLG 272

Query: 121 ENDTLPVIISTHL 122
            + TLPVIIS+ L
Sbjct: 273 PDSTLPVIISSGL 285

BLAST of MELO3C010123 vs. NCBI nr
Match: gi|698493472|ref|XP_009793011.1| (PREDICTED: uncharacterized protein LOC104239950 [Nicotiana sylvestris])

HSP 1 Score: 72.0 bits (175), Expect = 8.2e-10
Identity = 50/130 (38.46%), Postives = 69/130 (53.08%), Query Frame = 1

Query: 1   MHFNDKEIKFNVVNTMKFSADAENYSAIALDGTIVRKKPTISCLE--LKNSLRKMNEIIL 60
           M  ND+EI FNV  +M+  ++  N S I     IV+    +  +E  L   L  + E+  
Sbjct: 41  MRLNDEEIIFNVQKSMRRPSEFANCSLIDAVDVIVQSDDEVLTIEDPLAACLTNLEEVNG 100

Query: 61  DEL---------NAMFD-ELKFEPLDLQTKGEKKTKSSIGEPPELELKLLPNHLKCVYLG 119
           ++L            +D EL+FEPL L  +     K SI EPP+LELK LP HL+  +LG
Sbjct: 101 EDLAEWVLALEGRGFWDRELEFEPLHLGKRETPPAKPSIEEPPKLELKPLPTHLRYEFLG 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
M1DH28_SOLTU7.0e-0833.58Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400038510 PE=4 SV=1[more]
Q2AA50_ASPOF3.8e-0642.50Retrotransposon gag protein OS=Asparagus officinalis GN=19.t00014 PE=4 SV=1[more]
Q0KIP7_SOLDE6.5e-0632.31Integrase core domain containing protein OS=Solanum demissum GN=SDM1_41t00009 PE... [more]
Match NameE-valueIdentityDescription
gi|698566272|ref|XP_009773461.1|7.4e-1139.85PREDICTED: uncharacterized protein LOC104223691, partial [Nicotiana sylvestris][more]
gi|698428605|ref|XP_009789994.1|1.6e-1038.97PREDICTED: uncharacterized protein LOC104237528 [Nicotiana sylvestris][more]
gi|698551310|ref|XP_009769267.1|6.3e-1037.59PREDICTED: uncharacterized protein LOC104220148, partial [Nicotiana sylvestris][more]
gi|698514660|ref|XP_009802198.1|6.3e-1037.59PREDICTED: uncharacterized protein LOC104247794 [Nicotiana sylvestris][more]
gi|698493472|ref|XP_009793011.1|8.2e-1038.46PREDICTED: uncharacterized protein LOC104239950 [Nicotiana sylvestris][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010123T1MELO3C010123T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None