MELO3C010118 (gene) Melon (DHL92) v3.5.1

NameMELO3C010118
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
Locationchr2 : 13278684 .. 13279271 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTAACAGAAACATCAGTACTTCCTTATGTTGAAGCAACGGAAGAAGCTCTGGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATATTTCCGACAGAAGGTTTGAGCATGGACCGTTATGTGTCTAAGACATCTCTAATGATTGCAAAGACAATGATCAAAAGTGGTTTCCAAATGCATAAGGGATTGGGAAAAGATAATCAAGGGGACTCGGAAGTGATTTATCTTCCTAAAGCCAAGGAAAAGTTTGGTTTGGGCTATAAGCCAGTAACTTCTGAATGGGAGAAGGTTCGAGCAAAAAAGAAAGAAAAGAGAAGCGTGCTCCTTATGGGATGCGAGATGAAGGAGGAAAGAATAAGCATACCTCATTTATCTGAGACATTTAAGCTTGGAGAATTGTTGTTTGATACCCACCAGAGAAAAAGGCATAACGAAGATTATGAGATCTCAATTGCAGTTGTCTCCGAGAATACTAGTCTGCCTCATCCTTTGGTTCATAAGTGTCTGCCAGGATTTGAGTTGAACAATTGGGAGATCAAGAAGACATTGAAAGTCACTAAGGGATCGCAAAAGTAA

mRNA sequence

ATGTTTGTAACAGAAACATCAGTACTTCCTTATGTTGAAGCAACGGAAGAAGCTCTGGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATATTTCCGACAGAAGGTTTGAGCATGGACCGTTATGTGTCTAAGACATCTCTAATGATTGCAAAGACAATGATCAAAAGTGGTTTCCAAATGCATAAGGGATTGGGAAAAGATAATCAAGGGGACTCGGAAGTGATTTATCTTCCTAAAGCCAAGGAAAAGTTTGGTTTGGGCTATAAGCCAGTAACTTCTGAATGGGAGAAGGTTCGAGCAAAAAAGAAAGAAAAGAGAAGCGTGCTCCTTATGGGATGCGAGATGAAGGAGGAAAGAATAAGCATACCTCATTTATCTGAGACATTTAAGCTTGGAGAATTGTTGTTTGATACCCACCAGAGAAAAAGGCATAACGAAGATTATGAGATCTCAATTGCAGTTGTCTCCGAGAATACTAGTCTGCCTCATCCTTTGGTTCATAAGTGTCTGCCAGGATTTGAGTTGAACAATTGGGAGATCAAGAAGACATTGAAAGTCACTAAGGGATCGCAAAAGTAA

Coding sequence (CDS)

ATGTTTGTAACAGAAACATCAGTACTTCCTTATGTTGAAGCAACGGAAGAAGCTCTGGAATGTTCTTATAGATCGTTTGAAATTGCTAATGCTACTATATTTCCGACAGAAGGTTTGAGCATGGACCGTTATGTGTCTAAGACATCTCTAATGATTGCAAAGACAATGATCAAAAGTGGTTTCCAAATGCATAAGGGATTGGGAAAAGATAATCAAGGGGACTCGGAAGTGATTTATCTTCCTAAAGCCAAGGAAAAGTTTGGTTTGGGCTATAAGCCAGTAACTTCTGAATGGGAGAAGGTTCGAGCAAAAAAGAAAGAAAAGAGAAGCGTGCTCCTTATGGGATGCGAGATGAAGGAGGAAAGAATAAGCATACCTCATTTATCTGAGACATTTAAGCTTGGAGAATTGTTGTTTGATACCCACCAGAGAAAAAGGCATAACGAAGATTATGAGATCTCAATTGCAGTTGTCTCCGAGAATACTAGTCTGCCTCATCCTTTGGTTCATAAGTGTCTGCCAGGATTTGAGTTGAACAATTGGGAGATCAAGAAGACATTGAAAGTCACTAAGGGATCGCAAAAGTAA

Protein sequence

MFVTETSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVIYLPKAKEKFGLGYKPVTSEWEKVRAKKKEKRSVLLMGCEMKEERISIPHLSETFKLGELLFDTHQRKRHNEDYEISIAVVSENTSLPHPLVHKCLPGFELNNWEIKKTLKVTKGSQK*
BLAST of MELO3C010118 vs. TrEMBL
Match: A0A0A0KUJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G528430 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.6e-22
Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 1

Query: 41  MDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVIYLPKAKEKFGLGYKPVTSEWEK 100
           MDRY+SKTSLMIAK MIKSGFQM KGLGK+NQG SE+  LPKAKEKFGLG+KP+  +WEK
Sbjct: 1   MDRYMSKTSLMIAKPMIKSGFQMTKGLGKNNQGGSELFSLPKAKEKFGLGFKPMAFDWEK 60

Query: 101 VRAKKKEKRS 111
           VRAKKK+K +
Sbjct: 61  VRAKKKKKET 70

BLAST of MELO3C010118 vs. TrEMBL
Match: A0A061ESA1_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_022266 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-19
Identity = 68/182 (37.36%), Postives = 95/182 (52.20%), Query Frame = 1

Query: 5   ETSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMH 64
           + S  PYVEATEE  ECS+RSFE  NAT    + +     +S  + M  K  +  G +  
Sbjct: 761 QPSSAPYVEATEEVPECSFRSFEFVNATYIGEKKVIPTPRLSVATKMGVKQTVGKGCRAG 820

Query: 65  KGLGKDNQGDSEVIYLPKAKEKFGLGYKPVTSEWEKVRAKKKEKRSVLLMGCEMKEERIS 124
            GLGK+ QG +  +   K +E+FGLGYKP   E  K+ A+KK KR   L G E +    +
Sbjct: 821 LGLGKNLQGINRPLTPMKNEERFGLGYKPTKEERRKLTAQKKIKRMAQLEGKEEEFGERT 880

Query: 125 IPHLSETFKLGELLF-----DTHQRKRHNEDYEISIAVVSENTSLPHPLVHKCLPGFELN 182
           IPHL ETF+    +        +Q  R  ++  I + +  E      P+V+  LPG EL+
Sbjct: 881 IPHLYETFRSAGFIHPEAPPKVNQVLRMFDELSIHM-IRDEEPDGKIPVVYPVLPGEELS 940

BLAST of MELO3C010118 vs. TrEMBL
Match: A0A061FRW2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_045159 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-19
Identity = 62/194 (31.96%), Postives = 97/194 (50.00%), Query Frame = 1

Query: 1    MFVTETSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSG 60
            + +++ +  PYVEATEE  ECS+RSFE  N T            +SKT+ MI   ++  G
Sbjct: 958  LLISKPADTPYVEATEEMPECSFRSFEFVNTTYVGEGTTPPIPRLSKTTKMIVSQILGKG 1017

Query: 61   FQMHKGLGKDNQGDSEVIYLPKAKEKFGLGYKPVTSEWEKVRAKKKEKRSVLLMGCEMKE 120
            ++   GLGK+ QG    I   K +E+FGLGYKP   E E++ A+++++R     G E++ 
Sbjct: 1018 YRAGAGLGKELQGIRSPIRTTKNEERFGLGYKPTKKEREEMIAERRKERLARFKGHELEI 1077

Query: 121  ERISIPHLSETFKLGELLFDTHQRKRHNEDY--------EISIAVVSENTSLPH-----P 180
              ++ PHL +TF+ G  +F       + E          ++SI    E    P      P
Sbjct: 1078 RGMTYPHLYKTFRSGGCIFPESLTVENQESVSALGGTFSDLSICATEEGEEQPRNVDEIP 1137

Query: 181  LVHKCLPGFELNNW 182
              +   P  +L+NW
Sbjct: 1138 TTYLGPPNLKLSNW 1151

BLAST of MELO3C010118 vs. TrEMBL
Match: A0A061E6J4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_010507 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.2e-19
Identity = 62/194 (31.96%), Postives = 96/194 (49.48%), Query Frame = 1

Query: 1    MFVTETSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSG 60
            + +++ +  PYVEA EE  ECS+RSFE  N T            +SKT+ MI   ++  G
Sbjct: 987  LLISKPADTPYVEAAEEVPECSFRSFEFVNTTYVGEGTTPPIPRLSKTTKMIVSQILGKG 1046

Query: 61   FQMHKGLGKDNQGDSEVIYLPKAKEKFGLGYKPVTSEWEKVRAKKKEKRSVLLMGCEMKE 120
            ++   GLGK+ QG    I+  K +EKFGLGYKP   E E++ A ++++R     G E++ 
Sbjct: 1047 YRAGAGLGKELQGIRSPIHTTKNEEKFGLGYKPTKKEREEMIAGRRKERLARFKGHELEI 1106

Query: 121  ERISIPHLSETFKLGELLFDTHQRKRHNEDY--------EISIAVVSENTSLPH-----P 180
              ++ PHL +TF+ G  +F       + E          ++SI    E    P      P
Sbjct: 1107 RGMTYPHLYKTFRSGGCIFPESLTVENQESVSALGGTFSDLSICATEEGEEQPRNADEIP 1166

Query: 181  LVHKCLPGFELNNW 182
              +   P  +L+NW
Sbjct: 1167 TTYFGPPNLKLSNW 1180

BLAST of MELO3C010118 vs. TrEMBL
Match: A0A061EXR3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.1e-19
Identity = 70/194 (36.08%), Postives = 100/194 (51.55%), Query Frame = 1

Query: 5    ETSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMH 64
            + S  PYVEATEE  ECS+RSFE  NAT      +     +S  + M  K  +  G ++ 
Sbjct: 1610 QPSSAPYVEATEEVPECSFRSFEFVNATYVGERKVIPTPRLSVATKMGVKQTVGKGCRVG 1669

Query: 65   KGLGKDNQGDSEVIYLPKAKEKFGLGYKPVTSEWEKVRAKKKEKRSVLLMGCEMKEERIS 124
             GLGK+ QG +  +   K +E+FGLGYKP   E  K+ A+KK KR   L G + +    +
Sbjct: 1670 LGLGKNLQGINRPLTPMKNEERFGLGYKPTKEERRKLTAQKKIKRMAQLEGKKEEFGERT 1729

Query: 125  IPHLSETFKLGELLFDTHQRKRHNE---DYEISIAVV-SENTSLPHPLVHKCLPGFELNN 184
            IPHL ETF+    +      K +       E+SI ++  E      P+V+  LPG EL+N
Sbjct: 1730 IPHLYETFRSAGFIHPEAPPKVNQVLRIFDELSIHMIRDEEPDGKIPVVYPVLPGEELSN 1789

Query: 185  WEIKKTLKVTKGSQ 195
            W   +   + K S+
Sbjct: 1790 WTATELPIIFKSSK 1803

BLAST of MELO3C010118 vs. NCBI nr
Match: gi|700196229|gb|KGN51406.1| (hypothetical protein Csa_5G528430 [Cucumis sativus])

HSP 1 Score: 112.8 bits (281), Expect = 6.6e-22
Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 1

Query: 41  MDRYVSKTSLMIAKTMIKSGFQMHKGLGKDNQGDSEVIYLPKAKEKFGLGYKPVTSEWEK 100
           MDRY+SKTSLMIAK MIKSGFQM KGLGK+NQG SE+  LPKAKEKFGLG+KP+  +WEK
Sbjct: 1   MDRYMSKTSLMIAKPMIKSGFQMTKGLGKNNQGGSELFSLPKAKEKFGLGFKPMAFDWEK 60

Query: 101 VRAKKKEKRS 111
           VRAKKK+K +
Sbjct: 61  VRAKKKKKET 70

BLAST of MELO3C010118 vs. NCBI nr
Match: gi|590630969|ref|XP_007027433.1| (Gag-pro-like protein [Theobroma cacao])

HSP 1 Score: 102.8 bits (255), Expect = 6.8e-19
Identity = 68/182 (37.36%), Postives = 95/182 (52.20%), Query Frame = 1

Query: 5   ETSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMH 64
           + S  PYVEATEE  ECS+RSFE  NAT    + +     +S  + M  K  +  G +  
Sbjct: 761 QPSSAPYVEATEEVPECSFRSFEFVNATYIGEKKVIPTPRLSVATKMGVKQTVGKGCRAG 820

Query: 65  KGLGKDNQGDSEVIYLPKAKEKFGLGYKPVTSEWEKVRAKKKEKRSVLLMGCEMKEERIS 124
            GLGK+ QG +  +   K +E+FGLGYKP   E  K+ A+KK KR   L G E +    +
Sbjct: 821 LGLGKNLQGINRPLTPMKNEERFGLGYKPTKEERRKLTAQKKIKRMAQLEGKEEEFGERT 880

Query: 125 IPHLSETFKLGELLF-----DTHQRKRHNEDYEISIAVVSENTSLPHPLVHKCLPGFELN 182
           IPHL ETF+    +        +Q  R  ++  I + +  E      P+V+  LPG EL+
Sbjct: 881 IPHLYETFRSAGFIHPEAPPKVNQVLRMFDELSIHM-IRDEEPDGKIPVVYPVLPGEELS 940

BLAST of MELO3C010118 vs. NCBI nr
Match: gi|590569208|ref|XP_007011006.1| (Uncharacterized protein TCM_045159 [Theobroma cacao])

HSP 1 Score: 102.8 bits (255), Expect = 6.8e-19
Identity = 62/194 (31.96%), Postives = 97/194 (50.00%), Query Frame = 1

Query: 1    MFVTETSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSG 60
            + +++ +  PYVEATEE  ECS+RSFE  N T            +SKT+ MI   ++  G
Sbjct: 958  LLISKPADTPYVEATEEMPECSFRSFEFVNTTYVGEGTTPPIPRLSKTTKMIVSQILGKG 1017

Query: 61   FQMHKGLGKDNQGDSEVIYLPKAKEKFGLGYKPVTSEWEKVRAKKKEKRSVLLMGCEMKE 120
            ++   GLGK+ QG    I   K +E+FGLGYKP   E E++ A+++++R     G E++ 
Sbjct: 1018 YRAGAGLGKELQGIRSPIRTTKNEERFGLGYKPTKKEREEMIAERRKERLARFKGHELEI 1077

Query: 121  ERISIPHLSETFKLGELLFDTHQRKRHNEDY--------EISIAVVSENTSLPH-----P 180
              ++ PHL +TF+ G  +F       + E          ++SI    E    P      P
Sbjct: 1078 RGMTYPHLYKTFRSGGCIFPESLTVENQESVSALGGTFSDLSICATEEGEEQPRNVDEIP 1137

Query: 181  LVHKCLPGFELNNW 182
              +   P  +L+NW
Sbjct: 1138 TTYLGPPNLKLSNW 1151

BLAST of MELO3C010118 vs. NCBI nr
Match: gi|590695072|ref|XP_007044788.1| (Uncharacterized protein TCM_010507 [Theobroma cacao])

HSP 1 Score: 102.4 bits (254), Expect = 8.9e-19
Identity = 62/194 (31.96%), Postives = 96/194 (49.48%), Query Frame = 1

Query: 1    MFVTETSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSG 60
            + +++ +  PYVEA EE  ECS+RSFE  N T            +SKT+ MI   ++  G
Sbjct: 987  LLISKPADTPYVEAAEEVPECSFRSFEFVNTTYVGEGTTPPIPRLSKTTKMIVSQILGKG 1046

Query: 61   FQMHKGLGKDNQGDSEVIYLPKAKEKFGLGYKPVTSEWEKVRAKKKEKRSVLLMGCEMKE 120
            ++   GLGK+ QG    I+  K +EKFGLGYKP   E E++ A ++++R     G E++ 
Sbjct: 1047 YRAGAGLGKELQGIRSPIHTTKNEEKFGLGYKPTKKEREEMIAGRRKERLARFKGHELEI 1106

Query: 121  ERISIPHLSETFKLGELLFDTHQRKRHNEDY--------EISIAVVSENTSLPH-----P 180
              ++ PHL +TF+ G  +F       + E          ++SI    E    P      P
Sbjct: 1107 RGMTYPHLYKTFRSGGCIFPESLTVENQESVSALGGTFSDLSICATEEGEEQPRNADEIP 1166

Query: 181  LVHKCLPGFELNNW 182
              +   P  +L+NW
Sbjct: 1167 TTYFGPPNLKLSNW 1180

BLAST of MELO3C010118 vs. NCBI nr
Match: gi|590636870|ref|XP_007028966.1| (Uncharacterized protein TCM_024883 [Theobroma cacao])

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-18
Identity = 70/194 (36.08%), Postives = 100/194 (51.55%), Query Frame = 1

Query: 5    ETSVLPYVEATEEALECSYRSFEIANATIFPTEGLSMDRYVSKTSLMIAKTMIKSGFQMH 64
            + S  PYVEATEE  ECS+RSFE  NAT      +     +S  + M  K  +  G ++ 
Sbjct: 1610 QPSSAPYVEATEEVPECSFRSFEFVNATYVGERKVIPTPRLSVATKMGVKQTVGKGCRVG 1669

Query: 65   KGLGKDNQGDSEVIYLPKAKEKFGLGYKPVTSEWEKVRAKKKEKRSVLLMGCEMKEERIS 124
             GLGK+ QG +  +   K +E+FGLGYKP   E  K+ A+KK KR   L G + +    +
Sbjct: 1670 LGLGKNLQGINRPLTPMKNEERFGLGYKPTKEERRKLTAQKKIKRMAQLEGKKEEFGERT 1729

Query: 125  IPHLSETFKLGELLFDTHQRKRHNE---DYEISIAVV-SENTSLPHPLVHKCLPGFELNN 184
            IPHL ETF+    +      K +       E+SI ++  E      P+V+  LPG EL+N
Sbjct: 1730 IPHLYETFRSAGFIHPEAPPKVNQVLRIFDELSIHMIRDEEPDGKIPVVYPVLPGEELSN 1789

Query: 185  WEIKKTLKVTKGSQ 195
            W   +   + K S+
Sbjct: 1790 WTATELPIIFKSSK 1803

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KUJ7_CUCSA4.6e-2277.14Uncharacterized protein OS=Cucumis sativus GN=Csa_5G528430 PE=4 SV=1[more]
A0A061ESA1_THECC4.8e-1937.36Gag-pro-like protein OS=Theobroma cacao GN=TCM_022266 PE=4 SV=1[more]
A0A061FRW2_THECC4.8e-1931.96Uncharacterized protein OS=Theobroma cacao GN=TCM_045159 PE=4 SV=1[more]
A0A061E6J4_THECC6.2e-1931.96Uncharacterized protein OS=Theobroma cacao GN=TCM_010507 PE=4 SV=1[more]
A0A061EXR3_THECC8.1e-1936.08Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700196229|gb|KGN51406.1|6.6e-2277.14hypothetical protein Csa_5G528430 [Cucumis sativus][more]
gi|590630969|ref|XP_007027433.1|6.8e-1937.36Gag-pro-like protein [Theobroma cacao][more]
gi|590569208|ref|XP_007011006.1|6.8e-1931.96Uncharacterized protein TCM_045159 [Theobroma cacao][more]
gi|590695072|ref|XP_007044788.1|8.9e-1931.96Uncharacterized protein TCM_010507 [Theobroma cacao][more]
gi|590636870|ref|XP_007028966.1|1.2e-1836.08Uncharacterized protein TCM_024883 [Theobroma cacao][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010118T1MELO3C010118T1mRNA