MELO3C010115 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C010115
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionKinase-related protein of unknown function (DUF1296)
Locationchr2 : 13218270 .. 13218710 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAGGCCTTTCACTTCTAAAGCTGATGGACCTATTAGTGATGGACCGATTGGGGAGGTGAAAAGTAATTATGGGCTAGGCACAATTGGAGGTTATGGGTCTGGGCTTTCAATTTCCTCTGGTTTAATGGAAACAATTCCAGCTTCCTTTTCCAATGATACTTCTGATAAGAAAATGTCCAATGGTGCTTCTAATGGTGCTACTAGTGGTTCTAATTCTTCATGGACTTCTATATTTGGCTTGTCGTCGAGAAATCCCCTTCCTTTACCCCCTGCCCCAATATCCATAGGAGATAAAATTGTTGTAGTTCCTCCCGATGAGGTTATTGCTCAAGAAGTTGGAGTATGGGAAAATTCCATAGTAGCGCAACTTGTTGAGGCAAAAAATGCCTTATACTGTCATTTATCGGATTATAGAGAAACTTTGGGGAAAAATTGA

mRNA sequence

ATGGGTAGGCCTTTCACTTCTAAAGCTGATGGACCTATTAGTGATGGACCGATTGGGGAGGTGAAAAGTAATTATGGGCTAGGCACAATTGGAGGTTATGGGTCTGGGCTTTCAATTTCCTCTGGTTTAATGGAAACAATTCCAGCTTCCTTTTCCAATGATACTTCTGATAAGAAAATGTCCAATGGTGCTTCTAATGGTGCTACTAGTGGTTCTAATTCTTCATGGACTTCTATATTTGGCTTGTCGTCGAGAAATCCCCTTCCTTTACCCCCTGCCCCAATATCCATAGGAGATAAAATTGTTGTAGTTCCTCCCGATGAGGTTATTGCTCAAGAAGTTGGAGTATGGGAAAATTCCATAGTAGCGCAACTTGTTGAGGCAAAAAATGCCTTATACTGTCATTTATCGGATTATAGAGAAACTTTGGGGAAAAATTGA

Coding sequence (CDS)

ATGGGTAGGCCTTTCACTTCTAAAGCTGATGGACCTATTAGTGATGGACCGATTGGGGAGGTGAAAAGTAATTATGGGCTAGGCACAATTGGAGGTTATGGGTCTGGGCTTTCAATTTCCTCTGGTTTAATGGAAACAATTCCAGCTTCCTTTTCCAATGATACTTCTGATAAGAAAATGTCCAATGGTGCTTCTAATGGTGCTACTAGTGGTTCTAATTCTTCATGGACTTCTATATTTGGCTTGTCGTCGAGAAATCCCCTTCCTTTACCCCCTGCCCCAATATCCATAGGAGATAAAATTGTTGTAGTTCCTCCCGATGAGGTTATTGCTCAAGAAGTTGGAGTATGGGAAAATTCCATAGTAGCGCAACTTGTTGAGGCAAAAAATGCCTTATACTGTCATTTATCGGATTATAGAGAAACTTTGGGGAAAAATTGA

Protein sequence

MGRPFTSKADGPISDGPIGEVKSNYGLGTIGGYGSGLSISSGLMETIPASFSNDTSDKKMSNGASNGATSGSNSSWTSIFGLSSRNPLPLPPAPISIGDKIVVVPPDEVIAQEVGVWENSIVAQLVEAKNALYCHLSDYRETLGKN*
Homology
[Close]
BLAST of MELO3C010115 vs. NCBI nr
Match: gi|659114595|ref|XP_008457134.1| (PREDICTED: uncharacterized protein LOC103496880 [Cucumis melo])

HSP 1 Score: 77.4 bits (189), Expect = 2.3e-11
Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = 1 

Query: 8   KADGPISDGPIGEVKSNYGLGTIGGYGSGLSISSGLMETIPASFSNDTSDKKMS-NGASN 67
           K DG  S GP+      +G+  IG  G    ++SG   +     S  +  K +S N   N
Sbjct: 81  KRDGQHSIGPL------FGIEEIGKSGGSSELNSGRPVSTDQGISFGSISKNLSVNVVEN 140

Query: 68  GA-TSGSNSSWTSIFGLSSRNPLPLPPAPISIGDKIVVVPPDEVIAQEVGVWENSIVAQL 126
           G  T+GSNS+W S+FG S    LP    P +IGD I+VVP +EVIAQ + VWENS+ A++
Sbjct: 141 GPKTTGSNSTWASLFGTSPDGSLPYTQ-PKTIGDNIIVVPSEEVIAQNIRVWENSLKAKI 193

[Close]
BLAST of MELO3C010115 vs. NCBI nr
Match: gi|659128572|ref|XP_008464269.1| (PREDICTED: uncharacterized protein LOC103502197 [Cucumis melo])

HSP 1 Score: 72.8 bits (177), Expect = 5.7e-10
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1 

Query: 69  TSGSNSSWTSIFGLSSRNPLPLPPAPISIGDKIVVVPPDEVIAQEVGVWENSIVAQLVEA 128
           T GSNS+W S+F  S+   LP  P P +IGDKIVVVPP+EVI Q + VWENS+V +L++A
Sbjct: 156 TIGSNSTWASLFRTSTEGSLPYTP-PKAIGDKIVVVPPEEVIVQGIRVWENSLVGKLIDA 214

[Close]
BLAST of MELO3C010115 vs. NCBI nr
Match: gi|659126448|ref|XP_008463187.1| (PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo])

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-08
Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 1 

Query: 11  GPISDGPIGEVKSNYGLGTIGGYGSGLSISSGLM----ETIPASFSN----DTSDKKMSN 70
           GP ++  IG   S+     +    SG  I  G      E  P++ S+    +  +  +SN
Sbjct: 38  GPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSN 97

Query: 71  GASNGATS---GSNSSWTSIFGLSSRNPLPLPPAPISIGDKIVVVPPDEVIAQEVGVWEN 130
              NG       S S+W S+FG SS   L L   P  IGDKIVV PP+EVI Q + VWEN
Sbjct: 98  VVQNGINKQLIDSKSTWASLFGTSSEESL-LYTLPKIIGDKIVVTPPEEVIDQGIKVWEN 157

[Close]
BLAST of MELO3C010115 vs. NCBI nr
Match: gi|659121150|ref|XP_008460523.1| (PREDICTED: uncharacterized protein LOC103499323 isoform X1 [Cucumis melo])

HSP 1 Score: 67.0 bits (162), Expect = 3.1e-08
Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 1 

Query: 58  KKMSNGASNGATSGSNSSWTSIFGLSSRNPLPLPPAPISIGDKIVVVPPDEVIAQEVGVW 117
           K  +   +N A +   S+W S+FG ++   LP    P +IGDKIVV+P +EVI Q + VW
Sbjct: 216 KNPTTNVNNFAANVPKSTWASLFGTATEGSLPYT-LPKAIGDKIVVIPTEEVIDQGIRVW 275

Query: 118 ENSIVAQLVEAK 130
           ENS+V QL++AK
Sbjct: 276 ENSLVGQLIDAK 286

The following BLAST results are available for this feature:
BLAST of MELO3C010115 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114595|ref|XP_008457134.1|2.3e-1140.83PREDICTED: uncharacterized protein LOC103496880 [Cucumis melo][more]
gi|659128572|ref|XP_008464269.1|5.7e-1058.33PREDICTED: uncharacterized protein LOC103502197 [Cucumis melo][more]
gi|659126448|ref|XP_008463187.1|1.1e-0837.69PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo][more]
gi|659121150|ref|XP_008460523.1|3.1e-0845.83PREDICTED: uncharacterized protein LOC103499323 isoform X1 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010115T1MELO3C010115T1mRNA