MELO3C010037 (gene) Melon (DHL92) v3.5.1

NameMELO3C010037
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionGag protease polyprotein
Locationchr2 : 11518126 .. 11518535 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCAGGATACTATGTTATGCCAAGGACGGGAAAAGGACATACTAGATCGCAGACAACTACTGAGCCCGCTGTGGGCACAAAAGCTCACTCGATAAATCAAGATGCAATGATAAAAAGAGAAGAAGCGCTGCTTGAAAAAGTTGAACTGACATTAAGTAAGTCAGGAAAGCAATTTAGTATTGAAAGGTTGAAGGCATTGGGAGCTACGACCTTCGAAGGAACCACGAGTCCAACTGATGTAGAGGAATGGGTGAACTTGGTCGAGAAATGTTTCAGAGTAATAGAGTACCCCAGAGACAGAAAAGTAAAGTTTGCAACATTTTTGTGCAGTATGAATTCTTGGATTTAAAACAAGGCAATATGGCTATTGCGGAGTATGAAAAAAATTTAACAGAGCTCGCGTAG

mRNA sequence

ATGAAAGCAGGATACTATGTTATGCCAAGGACGGGAAAAGGACATACTAGATCGCAGACAACTACTGAGCCCGCTGTGGGCACAAAAGCTCACTCGATAAATCAAGATGCAATGATAAAAAGAGAAGAAGCGCTGCTTGAAAAAGTTGAACTGACATTAAGTAAGTCAGGAAAGCAATTTAGTATTGAAAGGTTGAAGGCATTGGGAGCTACGACCTTCGAAGGAACCACGAGTCCAACTGATGTAGAGGAATGGGTGAACTTGGTCGAGAAATGTTTCAGAGTAATAGAGTACCCCAGAGACAGAAAATATGAATTCTTGGATTTAAAACAAGGCAATATGGCTATTGCGGAGTATGAAAAAAATTTAACAGAGCTCGCGTAG

Coding sequence (CDS)

ATGAAAGCAGGATACTATGTTATGCCAAGGACGGGAAAAGGACATACTAGATCGCAGACAACTACTGAGCCCGCTGTGGGCACAAAAGCTCACTCGATAAATCAAGATGCAATGATAAAAAGAGAAGAAGCGCTGCTTGAAAAAGTTGAACTGACATTAAGTAAGTCAGGAAAGCAATTTAGTATTGAAAGGTTGAAGGCATTGGGAGCTACGACCTTCGAAGGAACCACGAGTCCAACTGATGTAGAGGAATGGGTGAACTTGGTCGAGAAATGTTTCAGAGTAATAGAGTACCCCAGAGACAGAAAATATGAATTCTTGGATTTAAAACAAGGCAATATGGCTATTGCGGAGTATGAAAAAAATTTAACAGAGCTCGCGTAG

Protein sequence

MKAGYYVMPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFRVIEYPRDRKYEFLDLKQGNMAIAEYEKNLTELA*
BLAST of MELO3C010037 vs. TrEMBL
Match: A0A0A0LI31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G163160 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.5e-10
Identity = 33/86 (38.37%), Postives = 55/86 (63.95%), Query Frame = 1

Query: 23  EPAVGTKAHSINQDAMIKREEALLEK-----VELTLSKSGKQFSIERLKALGATTFEGTT 82
           EP + ++AH++N +A  + EEAL ++     +     +  K F IER+KALGAT F G  
Sbjct: 2   EPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGIE 61

Query: 83  SPTDVEEWVNLVEKCFRVIEYPRDRK 104
           +  + E+W+  +EKCFRV++ P++R+
Sbjct: 62  NHEEAEKWIRTLEKCFRVMQCPKERR 87

BLAST of MELO3C010037 vs. TrEMBL
Match: A0A0A0L7X2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G426910 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.8e-09
Identity = 33/76 (43.42%), Postives = 52/76 (68.42%), Query Frame = 1

Query: 26 VGTKAHSINQDAMIKREEALLEKV-----ELTLSKSGKQFSIERLKALGATTFEGTTSPT 85
          + ++AHS+N +AM +++E + ++V     ++   +  K+F IERLKALGAT F GTT P 
Sbjct: 1  MNSEAHSVNLNAMKEQKEVVYDRVTQRLVDIMAHQPEKKFGIERLKALGATEFTGTTKPE 60

Query: 86 DVEEWVNLVEKCFRVI 97
          + E+W+  +EKCFR I
Sbjct: 61 EFEKWIRTLEKCFRRI 76

BLAST of MELO3C010037 vs. NCBI nr
Match: gi|659098594|ref|XP_008450217.1| (PREDICTED: uncharacterized protein LOC103491879 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 3.3e-22
Identity = 57/96 (59.38%), Postives = 72/96 (75.00%), Query Frame = 1

Query: 8   MPRTGKGHTRSQTTTEPAVGTKAHSINQDAMIKREEALLEKVELTLSKSGKQFSIERLKA 67
           M R G+G TRSQTT EP +  +AH   QD   +R E LLE+VE  LSKSGKQFSI+RLKA
Sbjct: 1   MSRIGRGQTRSQTTIEPTLA-EAHLDKQDVRRERGEMLLERVEQPLSKSGKQFSIKRLKA 60

Query: 68  LGATTFEGTTSPTDVEEWVNLVEKCFRVIEYPRDRK 104
           +   TFEGTT P++ + W+NLVEKCF V+E+P++RK
Sbjct: 61  VRVMTFEGTTYPSNAKRWMNLVEKCFGVLEWPKERK 95

BLAST of MELO3C010037 vs. NCBI nr
Match: gi|659098594|ref|XP_008450217.1| (PREDICTED: uncharacterized protein LOC103491879 [Cucumis melo])

HSP 1 Score: 38.5 bits (88), Expect = 1.0e+01
Identity = 50/176 (28.41%), Postives = 67/176 (38.07%), Query Frame = 1

Query: 8   MPRTGKGHTRSQTTTEPAVGTKAH-----------------------SINQDAMIKREEA 67
           M R G+G TRSQTT EP +  +AH                          +   IKR +A
Sbjct: 1   MSRIGRGQTRSQTTIEPTLA-EAHLDKQDVRRERGEMLLERVEQPLSKSGKQFSIKRLKA 60

Query: 68  LL----------EKVELTLSKSGKQFSI-----ERLKALGATTFEGTTSPTDVEEW---- 127
           +              +  ++   K F +     ER   L     +G T     E+W    
Sbjct: 61  VRVMTFEGTTYPSNAKRWMNLVEKCFGVLEWPKERKVKLATFLLQGGT-----EDWWILY 120


HSP 2 Score: 77.0 bits (188), Expect = 2.6e-11
Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 1

Query: 62  IERLKALGATTFEGTTSPTDVEEWVNLVEKCFRVIEYPRDRKY----------------- 121
           IERLK LGAT FEG+T P DVE W+N++EKCF V+ + ++RK                  
Sbjct: 4   IERLKKLGATVFEGSTDPADVEVWLNMLEKCFDVMSFSQERKMFRGIFEEKYYPTTYCEA 63

Query: 122 ---EFLDLKQGNMAIAEYEKNLTELA 128
              EFL+LKQG++ + EYE   TEL+
Sbjct: 64  KRDEFLELKQGSLLVVEYEMKYTELS 89

BLAST of MELO3C010037 vs. NCBI nr
Match: gi|659072264|ref|XP_008464580.1| (PREDICTED: uncharacterized protein LOC103502419 [Cucumis melo])

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-10
Identity = 46/108 (42.59%), Postives = 56/108 (51.85%), Query Frame = 1

Query: 9   PRTGKGHTRSQTTTEPAVGT---KAHSINQDAMIKREEALLEKVELTL--------SKSG 68
           PR       S    E A+G+    A S         EE LL+++   L        S   
Sbjct: 25  PRKHPDAKTSNAAREAAMGSGESDAESSRPHVEGNMEEQLLDRLAQRLISGIRSAQSDPE 84

Query: 69  KQFSIERLKALGATTFEGTTSPTDVEEWVNLVEKCFRVIEYPRDRKYE 106
           K++ IERLKALGATTF GTT+P D E W+ L+EKCFRV   P DRK E
Sbjct: 85  KKYGIERLKALGATTFVGTTNPADAEAWLTLIEKCFRVTRCPEDRKVE 132

BLAST of MELO3C010037 vs. NCBI nr
Match: gi|700206416|gb|KGN61535.1| (hypothetical protein Csa_2G163160 [Cucumis sativus])

HSP 1 Score: 72.4 bits (176), Expect = 6.5e-10
Identity = 33/86 (38.37%), Postives = 55/86 (63.95%), Query Frame = 1

Query: 23  EPAVGTKAHSINQDAMIKREEALLEK-----VELTLSKSGKQFSIERLKALGATTFEGTT 82
           EP + ++AH++N +A  + EEAL ++     +     +  K F IER+KALGAT F G  
Sbjct: 2   EPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGIE 61

Query: 83  SPTDVEEWVNLVEKCFRVIEYPRDRK 104
           +  + E+W+  +EKCFRV++ P++R+
Sbjct: 62  NHEEAEKWIRTLEKCFRVMQCPKERR 87

BLAST of MELO3C010037 vs. NCBI nr
Match: gi|659068829|ref|XP_008446512.1| (PREDICTED: uncharacterized protein LOC103489219 [Cucumis melo])

HSP 1 Score: 69.3 bits (168), Expect = 5.5e-09
Identity = 31/74 (41.89%), Postives = 48/74 (64.86%), Query Frame = 1

Query: 32  SINQDAMIKREEALLEKVELTLSKSGKQFSIERLKALGATTFEGTTSPTDVEEWVNLVEK 91
           ++ +  + +  +  + +++ T S   K+F IERLKALG+TTF  TT+P + E W+ L+EK
Sbjct: 40  NVEEQLLDRLAQRFVSRIKSTQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEK 99

Query: 92  CFRVIEYPRDRKYE 106
           CFRV+    DRK E
Sbjct: 100 CFRVMRCSEDRKVE 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LI31_CUCSA4.5e-1038.37Uncharacterized protein OS=Cucumis sativus GN=Csa_2G163160 PE=4 SV=1[more]
A0A0A0L7X2_CUCSA3.8e-0943.42Uncharacterized protein OS=Cucumis sativus GN=Csa_3G426910 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659098594|ref|XP_008450217.1|3.3e-2259.38PREDICTED: uncharacterized protein LOC103491879 [Cucumis melo][more]
gi|659098594|ref|XP_008450217.1|1.0e+0128.41PREDICTED: uncharacterized protein LOC103491879 [Cucumis melo][more]
gi|659072264|ref|XP_008464580.1|1.3e-1042.59PREDICTED: uncharacterized protein LOC103502419 [Cucumis melo][more]
gi|700206416|gb|KGN61535.1|6.5e-1038.37hypothetical protein Csa_2G163160 [Cucumis sativus][more]
gi|659068829|ref|XP_008446512.1|5.5e-0941.89PREDICTED: uncharacterized protein LOC103489219 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010037T1MELO3C010037T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None