MELO3C010011 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C010011
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	78 kDa glucose-regulated protein homolog
Location	chr2 : 10836973 .. 10837709 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTGGAATTTGCAGAAAGATCATCAAGCCATTGATATTCTTTTAGCAGAGATTGACATATATGAGCTTTTTGCTTTCAAACATTGCAAGGGAAGGAAAGTCAAACTTGCTCTCTGTGAAGGTTATTACTTTCTTCCTTTAGAATGCAAGCTTGAATATTAATTTTATATTTTACTTCAGTTGATGTTGTTGCTTTGATAAATTGCGTTTTAAAAGGATGCTTGGTATATAATTGTTTGATTTCTAAGTGTACAATTTGGTGTTCTTTCTACACAGAACTTGATGAGAGGATGCGGGACTTAAAAAATGAGCTTCAGTCGTTTGATGGTGAAGAATATGATGAAGATCATAAGAGGAAGGCCATAGATGCACTGAAACGAATGGAGAATTGGAACTTATTTAGTGATACGTATGAGGTGAGGCCAGACTTTTATAGGTTTTGTTATTTTTGACTTTTATGCAACACTTCATGTATTCTTTATTATGTTTTGTAGAAGGGTTGTTAACACTCAACATGAATGTGTATTTTTTTTCTCTAAATTCTTGTAACATGCAGGAGTTCCAAAACTACACTGTAGCACGTGATACTTTTCTGGCTCATCTGGGTGCTACTCTCTGGGGGTCAATGAGACATATTATATCACCTTCACTGTCGGACGGGGCATTCCATTATTTTGAGAAAATATCATTTCAATTGTTTTTCATCACACAGGAGGTATGGTTCATATTTCTAA

mRNA sequence

ATGTTTTGGAATTTGCAGAAAGATCATCAAGCCATTGATATTCTTTTAGCAGAGATTGACATATATGAGCTTTTTGCTTTCAAACATTGCAAGGGAAGGAAAGTCAAACTTGCTCTCTGTGAAGAACTTGATGAGAGGATGCGGGACTTAAAAAATGAGCTTCAGTCGTTTGATGGTGAAGAATATGATGAAGATCATAAGAGGAAGGCCATAGATGCACTGAAACGAATGGAGAATTGGAACTTATTTAGTGATACGTATGAGGAGTTCCAAAACTACACTGTAGCACGTGATACTTTTCTGGCTCATCTGGGTGCTACTCTCTGGGGGAGGTATGGTTCATATTTCTAA

Coding sequence (CDS)

ATGTTTTGGAATTTGCAGAAAGATCATCAAGCCATTGATATTCTTTTAGCAGAGATTGACATATATGAGCTTTTTGCTTTCAAACATTGCAAGGGAAGGAAAGTCAAACTTGCTCTCTGTGAAGAACTTGATGAGAGGATGCGGGACTTAAAAAATGAGCTTCAGTCGTTTGATGGTGAAGAATATGATGAAGATCATAAGAGGAAGGCCATAGATGCACTGAAACGAATGGAGAATTGGAACTTATTTAGTGATACGTATGAGGAGTTCCAAAACTACACTGTAGCACGTGATACTTTTCTGGCTCATCTGGGTGCTACTCTCTGGGGGAGGTATGGTTCATATTTCTAA

Protein sequence

MFWNLQKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDHKRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWGRYGSYF*

Homology

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BLAST of MELO3C010011 vs. TrEMBL
Match: A0A0A0LXZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G651670 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 6.1e-54
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 7   KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 66
           KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH
Sbjct: 27  KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 86

Query: 67  KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 111
           KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG
Sbjct: 87  KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 130

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BLAST of MELO3C010011 vs. TrEMBL
Match: B9SPA1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0589300 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-51
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 1


Query: 7   KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 66
           KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERM+DLKNELQSF+GEEYDE H
Sbjct: 494 KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGEEYDESH 553

Query: 67  KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 111
           K+KAI+ALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG
Sbjct: 554 KKKAIEALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 597

[Close]

BLAST of MELO3C010011 vs. TrEMBL
Match: M5XEX7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004493mg PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 3.7e-51
Identity = 98/105 (93.33%), Postives = 103/105 (98.10%), Query Frame = 1


Query: 6   QKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDED 65
           QKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSF+GEEYDE 
Sbjct: 16  QKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFEGEEYDES 75

Query: 66  HKRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 111
           HKRKA++ALKRMENWNLFSDT+EEFQNYTVARDTFL+HLGA LWG
Sbjct: 76  HKRKALEALKRMENWNLFSDTHEEFQNYTVARDTFLSHLGANLWG 120

[Close]

BLAST of MELO3C010011 vs. TrEMBL
Match: A0A067LM29_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17447 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 3.7e-51
Identity = 98/104 (94.23%), Postives = 103/104 (99.04%), Query Frame = 1


Query: 7   KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 66
           KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERM+DLKNELQSF+G+EYDE H
Sbjct: 450 KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGDEYDESH 509

Query: 67  KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 111
           KRKAI+ALKRMENWNLF+DTYEEFQNYTVARDTFLAHLGATLWG
Sbjct: 510 KRKAIEALKRMENWNLFTDTYEEFQNYTVARDTFLAHLGATLWG 553

[Close]

BLAST of MELO3C010011 vs. TrEMBL
Match: V4UQ17_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007431mg PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.8e-51
Identity = 98/104 (94.23%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 7   KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 66
           KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERM+DLKNELQSF+GEEYDE+H
Sbjct: 360 KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGEEYDENH 419

Query: 67  KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 111
           KRKAI+AL+RMENWNLFSDT+EEFQNYTVARDTFLAHLGATLWG
Sbjct: 420 KRKAIEALRRMENWNLFSDTHEEFQNYTVARDTFLAHLGATLWG 463

[Close]

BLAST of MELO3C010011 vs. TAIR10
Match: AT5G58100.1 (AT5G58100.1 unknown protein)

HSP 1 Score: 201.1 bits (510), Expect = 3.9e-52
Identity = 94/105 (89.52%), Postives = 99/105 (94.29%), Query Frame = 1


Query: 6   QKDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDED 65
           + DHQA+DILLAEID+YELFAFKHCKGRKVKLALCEELDERMRDLK ELQSFDGEEYDE 
Sbjct: 454 ENDHQAVDILLAEIDVYELFAFKHCKGRKVKLALCEELDERMRDLKTELQSFDGEEYDET 513

Query: 66  HKRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 111
           HKRKA+DAL+RME+WNLFSD  EEFQNYTVARDTFLAHLGATLWG
Sbjct: 514 HKRKAMDALRRMESWNLFSDEREEFQNYTVARDTFLAHLGATLWG 558

[Close]

BLAST of MELO3C010011 vs. NCBI nr
Match: gi|449442649|ref|XP_004139093.1| (PREDICTED: uncharacterized protein LOC101207480 isoform X1 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 8.7e-54
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 7   KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 66
           KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH
Sbjct: 469 KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 528

Query: 67  KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 111
           KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG
Sbjct: 529 KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 572

[Close]

BLAST of MELO3C010011 vs. NCBI nr
Match: gi|778664018|ref|XP_011660197.1| (PREDICTED: uncharacterized protein LOC101207480 isoform X2 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 8.7e-54
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 7   KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 66
           KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH
Sbjct: 283 KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 342

Query: 67  KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 111
           KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG
Sbjct: 343 KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 386

[Close]

BLAST of MELO3C010011 vs. NCBI nr
Match: gi|700211537|gb|KGN66633.1| (hypothetical protein Csa_1G651670 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 8.7e-54
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 7   KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 66
           KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH
Sbjct: 27  KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 86

Query: 67  KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 111
           KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG
Sbjct: 87  KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 130

[Close]

BLAST of MELO3C010011 vs. NCBI nr
Match: gi|659085865|ref|XP_008443650.1| (PREDICTED: uncharacterized protein LOC103487197 [Cucumis melo])

HSP 1 Score: 218.0 bits (554), Expect = 8.7e-54
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1


Query: 7   KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 66
           KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH
Sbjct: 468 KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 527

Query: 67  KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 111
           KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG
Sbjct: 528 KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 571

[Close]

BLAST of MELO3C010011 vs. NCBI nr
Match: gi|223532794|gb|EEF34572.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-51
Identity = 99/104 (95.19%), Postives = 103/104 (99.04%), Query Frame = 1


Query: 7   KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMRDLKNELQSFDGEEYDEDH 66
           KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERM+DLKNELQSF+GEEYDE H
Sbjct: 494 KDHQAIDILLAEIDIYELFAFKHCKGRKVKLALCEELDERMQDLKNELQSFEGEEYDESH 553

Query: 67  KRKAIDALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 111
           K+KAI+ALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG
Sbjct: 554 KKKAIEALKRMENWNLFSDTYEEFQNYTVARDTFLAHLGATLWG 597

The following BLAST results are available for this feature:

BLAST of MELO3C010011 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXZ4_CUCSA	6.1e-54	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G651670 PE=4 SV=1	[more]
B9SPA1_RICCO	1.6e-51	95.19	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0589300 PE=4 SV=1	[more]
M5XEX7_PRUPE	3.7e-51	93.33	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004493mg PE=4 SV=1	[more]
A0A067LM29_JATCU	3.7e-51	94.23	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17447 PE=4 SV=1	[more]
V4UQ17_9ROSI	4.8e-51	94.23	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007431mg PE=4 SV=1	[more]

BLAST of MELO3C010011 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58100.1	3.9e-52	89.52	unknown protein	[more]

BLAST of MELO3C010011 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442649\|ref\|XP_004139093.1\|	8.7e-54	100.00	PREDICTED: uncharacterized protein LOC101207480 isoform X1 [Cucumis sativus]	[more]
gi\|778664018\|ref\|XP_011660197.1\|	8.7e-54	100.00	PREDICTED: uncharacterized protein LOC101207480 isoform X2 [Cucumis sativus]	[more]
gi\|700211537\|gb\|KGN66633.1\|	8.7e-54	100.00	hypothetical protein Csa_1G651670 [Cucumis sativus]	[more]
gi\|659085865\|ref\|XP_008443650.1\|	8.7e-54	100.00	PREDICTED: uncharacterized protein LOC103487197 [Cucumis melo]	[more]
gi\|223532794\|gb\|EEF34572.1\|	2.4e-51	95.19	conserved hypothetical protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010584	pollen exine formation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU60210	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010011T1	MELO3C010011T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU60210	MU60210	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 33..60 scor
None	No IPR available	PANTHER	PTHR31515	FAMILY NOT NAMED	coord: 2..110 score: 8.0
None	No IPR available	PANTHER	PTHR31515:SF2	SUBFAMILY NOT NAMED	coord: 2..110 score: 8.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C010011	Csa1G651670	Cucumber (Chinese Long) v2	cumeB043
MELO3C010011	Cla002182	Watermelon (97103) v1	mewmB266
MELO3C010011	ClCG03G011620	Watermelon (Charleston Gray)	mewcgB246
MELO3C010011	Cla97C03G061930	Watermelon (97103) v2	mewmbB251
MELO3C010011	Bhi02G001159	Wax gourd	mewgoB299
MELO3C010011	CSPI01G31910	Wild cucumber (PI 183967)	cpimeB044
MELO3C010011	Cucsa.356310	Cucumber (Gy14) v1	cgymeB574
MELO3C010011	CmaCh10G008470	Cucurbita maxima (Rimu)	cmameB069
MELO3C010011	CmoCh10G008820	Cucurbita moschata (Rifu)	cmomeB061
MELO3C010011	Lsi06G006610	Bottle gourd (USVL1VR-Ls)	lsimeB398
MELO3C010011	Cp4.1LG18g02330	Cucurbita pepo (Zucchini)	cpemeB332
MELO3C010011	CsGy1G030920	Cucumber (Gy14) v2	cgybmeB040
MELO3C010011	Carg17814	Silver-seed gourd	carmeB0946
MELO3C010011	CsaV3_1G044170	Cucumber (Chinese Long) v3	cucmeB044

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C010011	Cucurbita maxima (Rimu)	cmameB107
MELO3C010011	Cucurbita moschata (Rifu)	cmomeB099
MELO3C010011	Cucurbita pepo (Zucchini)	cpemeB007
MELO3C010011	Silver-seed gourd	carmeB0540