MELO3C009792.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C009792.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptiondisease resistance protein RGA2-like
Locationchr04 : 29223966 .. 29224437 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAATTTCTTTGGACTTTTGCTGTTCAGGAAGTCCTAAAGAAGATCGTGAAATTTGGAGCACAGCAAATTGGGTTAGCATGGGGGTTGAAGAAGAAGAAGCTGTCCAATTTGAGACATTAACAGAAAGAAGTTACATATCGATTCTGGGAGGCTATGGGTGAAAGAACTTCAAGATATTGCCTACGAAGCTGATGATCTACTGAATGAGCTTGTTTATGAAGATCTTCGAAGAACTGCGGAACAAACTGAGGTACGTGATTTTATTTCCATCTCACCATCCAAAAATCCCTTTTTGTTTCGTTGCGAGAAGGCCAAGAAAATGAAGAACACTACTCAAACTTTATACAAACACTATTGTGAGGCAAGTGCTTTAGAACTTGTTGGTGACCAATCCGCCACAGAGACAGAGGTTGCTCCTAAGCAGATTCGAGAAACAACCTCAAATCTCGACTTTGAAGTCGTATGA

mRNA sequence

ATGGCTGAATTTCTTTGGACTTTTGCTGTTCAGGAAGTCCTAAAGAAGATCGTGAAATTTGGAGCACAGCAAATTGGAAAGAAGTTACATATCGATTCTGGGAGGCTATGGGTGAAAGAACTTCAAGATATTGCCTACGAAGCTGATGATCTACTGAATGAGCTTGTTTATGAAGATCTTCGAAGAACTGCGGAACAAACTGAGGTACGTGATTTTATTTCCATCTCACCATCCAAAAATCCCTTTTTGTTTCGTTGCGAGAAGGCCAAGAAAATGAAGAACACTACTCAAACTTTATACAAACACTATTGTGAGGCAAGTGCTTTAGAACTTGTTGGTGACCAATCCGCCACAGAGACAGAGGTTGCTCCTAAGCAGATTCGAGAAACAACCTCAAATCTCGACTTTGAAGTCGTATGA

Coding sequence (CDS)

ATGGCTGAATTTCTTTGGACTTTTGCTGTTCAGGAAGTCCTAAAGAAGATCGTGAAATTTGGAGCACAGCAAATTGGAAAGAAGTTACATATCGATTCTGGGAGGCTATGGGTGAAAGAACTTCAAGATATTGCCTACGAAGCTGATGATCTACTGAATGAGCTTGTTTATGAAGATCTTCGAAGAACTGCGGAACAAACTGAGGTACGTGATTTTATTTCCATCTCACCATCCAAAAATCCCTTTTTGTTTCGTTGCGAGAAGGCCAAGAAAATGAAGAACACTACTCAAACTTTATACAAACACTATTGTGAGGCAAGTGCTTTAGAACTTGTTGGTGACCAATCCGCCACAGAGACAGAGGTTGCTCCTAAGCAGATTCGAGAAACAACCTCAAATCTCGACTTTGAAGTCGTATGA

Protein sequence

MAEFLWTFAVQEVLKKIVKFGAQQIGKKLHIDSGRLWVKELQDIAYEADDLLNELVYEDLRRTAEQTEVRDFISISPSKNPFLFRCEKAKKMKNTTQTLYKHYCEASALELVGDQSATETEVAPKQIRETTSNLDFEVV
BLAST of MELO3C009792.2 vs. NCBI nr
Match: XP_004140442.1 (PREDICTED: disease resistance protein RGA2-like [Cucumis sativus] >KGN50811.1 hypothetical protein Csa_5G266890 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 2.4e-38
Identity = 100/170 (58.82%), Postives = 112/170 (65.88%), Query Frame = 0

Query: 1   MAEFLWTFAVQEVLKKIVKFGAQQIG----------------------------KKLHID 60
           MAEFLWTFAVQEVLKKIV FGA+QI                             KK H  
Sbjct: 1   MAEFLWTFAVQEVLKKIVNFGAEQISLAWGLEKELSHLKKWLLKAQTILADINTKKSHHH 60

Query: 61  SGRLWVKELQDIAYEADDLLNELVYEDLRRTAEQT----EVRDFISISPSKNPFLFRCEK 120
           S  LWV+EL DI YEADDLL+E+VYE +R+T EQT    +VRD  SISPSKN FLF  + 
Sbjct: 61  SVGLWVEELHDIIYEADDLLDEIVYEQIRQTVEQTGKLRKVRD--SISPSKNSFLFGLKM 120

Query: 121 AKKMKNTTQTLYKHYCEASALELVGDQSATETEVAPKQIRETTSNLDFEV 139
           AKKMK  T+TLY+HYCEAS L LVGD+S TE+E A  QIRETTS LDFEV
Sbjct: 121 AKKMKKITKTLYEHYCEASPLGLVGDESTTESEAALNQIRETTSILDFEV 168

BLAST of MELO3C009792.2 vs. NCBI nr
Match: XP_022145177.1 (putative disease resistance protein RGA3 [Momordica charantia])

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35
Identity = 95/170 (55.88%), Postives = 111/170 (65.29%), Query Frame = 0

Query: 1   MAEFLWTFAVQEVLKKIVKFGAQQIG----------------------------KKLHID 60
           MAEFLWTFAVQEVL+KIVK  AQQIG                            +KLH D
Sbjct: 1   MAEFLWTFAVQEVLRKIVKVAAQQIGLAWGLEKELSKLTKWLLKAETILGDINRRKLHHD 60

Query: 61  SGRLWVKELQDIAYEADDLLNELVYEDLRRTAE---QTEVRDFISISPSKNPFLFRCEKA 120
           S RLW+++LQD+ +EA DLL+ELVYEDLRR  E     +VR   SIS S N F FR + A
Sbjct: 61  SVRLWMEDLQDVVHEAHDLLDELVYEDLRRKVEIGKMNKVRG--SISRSYNLFSFRRKMA 120

Query: 121 KKMKNTTQTLYKHYCEASALELVGDQSATETEVAPKQIRETTSNLDFEVV 140
           KKMK+ T+TLYKHYCEAS L LVGD+S    ++  KQIRETTSNL+FEVV
Sbjct: 121 KKMKDVTETLYKHYCEASPLGLVGDESIETNQIVLKQIRETTSNLNFEVV 168

BLAST of MELO3C009792.2 vs. NCBI nr
Match: XP_022145104.1 (disease resistance protein RGA2-like [Momordica charantia])

HSP 1 Score: 153.7 bits (387), Expect = 4.7e-34
Identity = 92/170 (54.12%), Postives = 108/170 (63.53%), Query Frame = 0

Query: 1   MAEFLWTFAVQEVLKKIVKFGAQQIG----------------------------KKLHID 60
           MAEFLWTFAVQEVL+KIVK  AQQIG                            KK H D
Sbjct: 1   MAEFLWTFAVQEVLRKIVKVAAQQIGLARGLEKELSNLTKWLQKAETILRDINRKKSHSD 60

Query: 61  SGRLWVKELQDIAYEADDLLNELVYEDLRRTAE---QTEVRDFISISPSKNPFLFRCEKA 120
           S RLWV++LQD+ +EADDLL+ELVYE LRR  E     +VRD  S S S N FLFR + A
Sbjct: 61  SVRLWVEDLQDVVHEADDLLDELVYEHLRRKVEIGKINKVRD--SFSTSHNVFLFRLKMA 120

Query: 121 KKMKNTTQTLYKHYCEASALELVGDQSATETEVAPKQIRETTSNLDFEVV 140
           KK+K+ TQ L+KHYCEAS L LVG +S    ++   QIR+TTSNL+FEVV
Sbjct: 121 KKIKDITQILHKHYCEASPLGLVGQESTEANQIVLSQIRDTTSNLNFEVV 168

BLAST of MELO3C009792.2 vs. NCBI nr
Match: XP_022145229.1 (putative disease resistance protein RGA4 [Momordica charantia])

HSP 1 Score: 142.1 bits (357), Expect = 1.4e-30
Identity = 84/171 (49.12%), Postives = 111/171 (64.91%), Query Frame = 0

Query: 1   MAEFLWTFAVQEVLKKIVKFGAQQIG----------------------------KKLHID 60
           MAEFLWTFAVQEVLKK++K  A+QIG                            +KL  +
Sbjct: 1   MAEFLWTFAVQEVLKKVLKLAAEQIGVAWALDKELSKLRKRLLKAETILGDINRRKLCHE 60

Query: 61  SGRLWVKELQDIAYEADDLLNELVYEDLRRTAEQ---TEVRDFISISPSKNPFLFRCEKA 120
           S RLWV++LQ + Y+ADDLL++LVYEDLR+  E     +VR+F  +SPS NPFLFR + A
Sbjct: 61  SVRLWVEDLQHLVYQADDLLDDLVYEDLRQKVEMEKINKVRNF--LSPSNNPFLFRFKMA 120

Query: 121 KKMKNTTQTLYKHYCEASALELVGDQSATET-EVAPKQIRETTSNLDFEVV 140
           K+MK  ++TLY+HYCEAS L  VG++S   T +   +QIRETTS L+F+V+
Sbjct: 121 KRMKAISETLYEHYCEASVLGFVGEESTETTYKNILRQIRETTSILNFKVI 169

BLAST of MELO3C009792.2 vs. NCBI nr
Match: XP_022145171.1 (putative disease resistance protein RGA3 [Momordica charantia] >XP_022145172.1 putative disease resistance protein RGA3 [Momordica charantia] >XP_022145173.1 putative disease resistance protein RGA3 [Momordica charantia] >XP_022145174.1 putative disease resistance protein RGA3 [Momordica charantia] >XP_022145175.1 putative disease resistance protein RGA3 [Momordica charantia])

HSP 1 Score: 141.7 bits (356), Expect = 1.8e-30
Identity = 86/171 (50.29%), Postives = 110/171 (64.33%), Query Frame = 0

Query: 1   MAEFLWTFAVQEVLKKIVKFGAQQIG----------------------------KKLHID 60
           MAEFLWTFAVQEVLKK++K  A+QIG                            KKL  +
Sbjct: 1   MAEFLWTFAVQEVLKKVLKLAAEQIGVAWGLDKELSKLRKRLLKAETILGDINRKKLRHE 60

Query: 61  SGRLWVKELQDIAYEADDLLNELVYEDLRRTAE---QTEVRDFISISPSKNPFLFRCEKA 120
           S RLWV++LQ + Y+ADDLL+ELVYEDLRR  E     +VR+F S+  + NPFLFR + A
Sbjct: 61  SVRLWVEDLQHLVYQADDLLDELVYEDLRRKVEIEKINKVRNFFSL--TNNPFLFRSKMA 120

Query: 121 KKMKNTTQTLYKHYCEASALELVGDQSA-TETEVAPKQIRETTSNLDFEVV 140
             MK  ++TLY+HY EASAL LVG+++  T+ +   KQIRETTS L+FEV+
Sbjct: 121 NSMKAISETLYQHYYEASALGLVGEETTETDNKNILKQIRETTSILNFEVI 169

BLAST of MELO3C009792.2 vs. TrEMBL
Match: tr|A0A0A0KST5|A0A0A0KST5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G266890 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.6e-38
Identity = 100/170 (58.82%), Postives = 112/170 (65.88%), Query Frame = 0

Query: 1   MAEFLWTFAVQEVLKKIVKFGAQQIG----------------------------KKLHID 60
           MAEFLWTFAVQEVLKKIV FGA+QI                             KK H  
Sbjct: 1   MAEFLWTFAVQEVLKKIVNFGAEQISLAWGLEKELSHLKKWLLKAQTILADINTKKSHHH 60

Query: 61  SGRLWVKELQDIAYEADDLLNELVYEDLRRTAEQT----EVRDFISISPSKNPFLFRCEK 120
           S  LWV+EL DI YEADDLL+E+VYE +R+T EQT    +VRD  SISPSKN FLF  + 
Sbjct: 61  SVGLWVEELHDIIYEADDLLDEIVYEQIRQTVEQTGKLRKVRD--SISPSKNSFLFGLKM 120

Query: 121 AKKMKNTTQTLYKHYCEASALELVGDQSATETEVAPKQIRETTSNLDFEV 139
           AKKMK  T+TLY+HYCEAS L LVGD+S TE+E A  QIRETTS LDFEV
Sbjct: 121 AKKMKKITKTLYEHYCEASPLGLVGDESTTESEAALNQIRETTSILDFEV 168

BLAST of MELO3C009792.2 vs. TrEMBL
Match: tr|A0A0A0LBV0|A0A0A0LBV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822360 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-27
Identity = 86/169 (50.89%), Postives = 105/169 (62.13%), Query Frame = 0

Query: 1   MAEFLWTFAVQEVLKKIVKFGAQQI----------------------------GKKLHI- 60
           MAE + TF VQEVLK+IVK+GA+QI                             KK H  
Sbjct: 1   MAE-IGTFVVQEVLKRIVKYGAEQIVVAWELENEVSLLKDKLHDADTILEDINRKKSHPG 60

Query: 61  DSGRLWVKELQDIAYEADDLLNELVYEDLRRTAEQTEVRDFI--SISPSKNPFLFRCEKA 120
           +S + WV++L+DI +EADDLL+ELVYE LRRT E TE    +  SIS S N FLFR + A
Sbjct: 61  NSVKRWVEKLEDIVHEADDLLDELVYEHLRRTVEHTEKFSKVSDSISSSINSFLFRRKMA 120

Query: 121 KKMKNTTQTLYKHYCEASALELVGDQSATETEVAPKQIRETTSNLDFEV 139
           KK+KN T TL +HYC ASA  LVG ++ TE E+A  QIRETTS LDF+V
Sbjct: 121 KKIKNITDTLNQHYCAASAFGLVGVETVTEIELALNQIRETTSILDFQV 168

BLAST of MELO3C009792.2 vs. TrEMBL
Match: tr|A0A0A0KXG9|A0A0A0KXG9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016460 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.3e-23
Identity = 82/170 (48.24%), Postives = 98/170 (57.65%), Query Frame = 0

Query: 1   MAEFLWTFAVQEVLKKIVKFGAQQIG----------------------------KKLHID 60
           MAEFLWTFAVQEVLKK++K  A QIG                            KKLH  
Sbjct: 1   MAEFLWTFAVQEVLKKVLKLAADQIGLAWGLDKELSNLSQWLLKAEAILGEINRKKLHPS 60

Query: 61  SGRLWVKELQDIAYEADDLLNELVYEDLRRTAEQTEVRDF-ISISPSKNPF-LFRCEKAK 120
           S RLWV++LQ + +EADDLL+ELVYEDLR   E+  +     SIS   N F +FR + AK
Sbjct: 61  SVRLWVEDLQLVVHEADDLLDELVYEDLRTKVEKGPINKVRSSISSLSNIFIIFRFKMAK 120

Query: 121 KMKNTTQTLYKHYCEASALELVGDQSATETEVAPKQIRETTSNL-DFEVV 140
           K+K   Q L K Y EA+ L LVG++   +TE    QIRET S L DFEVV
Sbjct: 121 KIKAIIQKLRKCYSEATPLGLVGEE-FIQTENDLSQIRETISKLDDFEVV 169

BLAST of MELO3C009792.2 vs. TrEMBL
Match: tr|Q2V727|Q2V727_CUCME (R-FOM-2 OS=Cucumis melo OX=3656 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20
Identity = 67/166 (40.36%), Postives = 91/166 (54.82%), Query Frame = 0

Query: 1   MAEFLWTFAVQEVLKKIVKFGAQQIG----------------------------KKLHID 60
           M +FLWTFAV+E+LKK++K   +Q G                            +KLH D
Sbjct: 1   MGDFLWTFAVEEMLKKVLKVAREQTGLAWGFQKHLSKLQKWLLKAEAFLRNINTRKLHHD 60

Query: 61  SGRLWVKELQDIAYEADDLLNELVYEDLR---RTAEQTEVRDFISISPSKNPFLFRCEKA 120
           S R+WV +L+ + Y+ADDLL+E+VYEDLR   +T +  +V DF   SPS N  +FR   A
Sbjct: 61  SVRMWVDDLRHLVYQADDLLDEIVYEDLRQKVQTRKMKKVCDF--FSPSTNVLIFRLNMA 120

Query: 121 KKMKNTTQTLYKHYCEASALELVGDQSATETEVAPKQIRETTSNLD 136
           KKM      L KHY EA+ L LVG+++ +       Q RET S L+
Sbjct: 121 KKMMTLIALLEKHYLEAAPLGLVGNENVSPEIDVISQYRETISELE 164

BLAST of MELO3C009792.2 vs. TrEMBL
Match: tr|A0A0A0KTZ7|A0A0A0KTZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015850 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.6e-20
Identity = 71/163 (43.56%), Postives = 88/163 (53.99%), Query Frame = 0

Query: 1   MAEFLWTFAVQEVLKKIVKFGAQQIGK----------------------------KLHID 60
           MA+FLW+FAV EVLKK VK  A+QIG                             K    
Sbjct: 1   MADFLWSFAVDEVLKKTVKLVAEQIGMSWGFKKDLSKLRDSLLMVEAILRDVNRIKAEHQ 60

Query: 61  SGRLWVKELQDIAYEADDLLNELVYEDLRRTAEQTEVRDFISISPSKNPFLFRCEKAKKM 120
           + RLWV++L+ I +EAD LL+EL YEDLRR  +   VR F  +S SKNP +FR + A K+
Sbjct: 61  ALRLWVEKLEHIVFEADVLLDELSYEDLRRKVDARPVRSF--VSSSKNPLVFRLKMANKI 120

Query: 121 KNTTQTLYKHYCEASALELVGDQSATETEVAPKQIRETTSNLD 136
           K   + L +HYC AS + LV   S  E E  P QI ET S LD
Sbjct: 121 KAIAKRLDEHYCAASIMGLVAITS-KEVESEPSQILETDSFLD 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004140442.12.4e-3858.82PREDICTED: disease resistance protein RGA2-like [Cucumis sativus] >KGN50811.1 hy... [more]
XP_022145177.11.1e-3555.88putative disease resistance protein RGA3 [Momordica charantia][more]
XP_022145104.14.7e-3454.12disease resistance protein RGA2-like [Momordica charantia][more]
XP_022145229.11.4e-3049.12putative disease resistance protein RGA4 [Momordica charantia][more]
XP_022145171.11.8e-3050.29putative disease resistance protein RGA3 [Momordica charantia] >XP_022145172.1 p... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KST5|A0A0A0KST5_CUCSA1.6e-3858.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G266890 PE=3 SV=1[more]
tr|A0A0A0LBV0|A0A0A0LBV0_CUCSA2.1e-2750.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822360 PE=3 SV=1[more]
tr|A0A0A0KXG9|A0A0A0KXG9_CUCSA9.3e-2348.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016460 PE=3 SV=1[more]
tr|Q2V727|Q2V727_CUCME1.5e-2040.36R-FOM-2 OS=Cucumis melo OX=3656 PE=3 SV=1[more]
tr|A0A0A0KTZ7|A0A0A0KTZ7_CUCSA5.6e-2043.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015850 PE=3 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0043531 ADP binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C009792.2.1MELO3C009792.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23155:SF877SUBFAMILY NOT NAMEDcoord: 28..135
NoneNo IPR availablePANTHERPTHR23155LEUCINE-RICH REPEAT-CONTAINING PROTEINcoord: 28..135

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C009792.2Cla97C10G198730Watermelon (97103) v2medwmbB305
MELO3C009792.2Bhi11G002379Wax gourdmedwgoB382
The following gene(s) are paralogous to this gene:

None