MELO3C009772 (gene) Melon (DHL92) v3.5.1

NameMELO3C009772
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCondensin complex subunit 1
Locationchr4 : 28248408 .. 28250642 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGAAAAGCTATGTAATAGGTTTAGTGGAGTTTCAGGTATTCATTTTCAACTCTTCTCTCGGCATGCATGTTTTCCGATTTATAATTTAACTATAAAGTTTTGAATTTTGTACTTGCCTACATGCTCTCTTGGTATGACTTCTAATATGCTTTCATTATTAATCCCCAATACTTTATTATTGTTGACATATTTTTTAATTTGTTTAGTTGCACTCCAGTTCTTTTAGTTATAGTAATAGCGGGGCGAGTTTTTTTGTCGGTCACATACTATTCACTTATGATAAAGGAGAAATATTGTTGAAGATTTCACTTATAATTTTGTGATGCATTATTTATTTAAGATGTTCATTATTTATTTAAGATGTTCCATTGGTAAAGAGAGCAATAGTTGGAAAATAAATTTCATATAGAAAGTCAATAGACTAAAGATACTTTCACAAGTAGTCATTTCAAGCTCACTCTGAGAAGAAGTTAGGGATTGAAGAGAGATGACATGGAAATAGCAATTTTGCAAGAAAAAGAAAAATCGGTTGCAATGCATCAAATATCAAGTTTTCAAAGTAACCACATCATGGTGTTCTGAAGACTATGCCTATTATCCATTTGCAGATGTTAGACAGTGGGAATATATTTCATATTGCCTTTCTCAGCTCGGCTTCACAGAAAAGGGAATGAAAAAGTTGATAGATTCATTCAAGACATACGAACATGTTGTTTCGGAGGACTCTGTAATGGAACATTTCAAAAGCATCATAAACAAGGTACAAGCTTATTTGGCTAGAACTCGCACGCTCCCCTAACCTTAGAATTGGAAAATTCTCATGTCTTCGTATTTTATTTCAGAGTAAGAAATTTGCTAAACCAGAACTCAAGTTGTGCGTAGAAGAATTTGAAGAAAAACTAAACAAGGCTCATAAGGAAAGGAAGGAGCAGGAAGTTACTGCTAGAAATGCCGAGATTCATCAACAGAGAATTGATAATATTGAAACTACTTCTGTGGCAGTGAAAAATGAAGATCCTACAGAGTCCGAAATCACTGAAGGTTGGTTTAAGCCACCAACTCATTTCTATTGTTCTTGTACTAATTTCTAAGTAGTCTAAAACCATCACTGGTAGGAACTTTGACATTTAAACATCATTCTTGCAGATGAAAACACTGAATCATCTGAAGATGGTGAGTCAATAAATGACAATTCAGAACCTAAGTTCGTTGAGTCGGAAGATGGAACTTCCGGTGAGCTGACAGAGTCGGAAACTTGTAAAACTGAAATTCAATCACCCCAAGTTGAGAATGAAGGTATTATGAGCTCAAAAAATTGATTATTTTATTATTATTACTTTTTTTTAAGATATCAAGAATCAAGAATATCCATCGGTACATTTCTGCCCATTTTGTAGGGACCTCCGATTTGCGAGTTAAGAGAAGAAGCTCACGTAGAAGAGGCATTTCTTCGTGAACTTATTGTTGTCTTTTGTAAGTTGATTTCTGCCTCTAGTGGTTATTTGCTTCCTGTTATACGACAATGTTCTGACCATACAACAAATTTAATGAATTTATTTTCTTTTAAAACACCATATACCTTGACTTTCTCCAAACATTTACAAATTAAAAAAAAGGTCTTGAATCTAAAACCCACGACAAGAGACACATTGAATCTCTTAAATTACATTGATTACAAGACTTAATTTAAGTAGGGTTCATCTTTATTGGTGCAGTTAAGTATAGTTAGTCTTGATTGTGGCTTAAGTGATAGATCATTTATGCCTTCAGTTACAAGGTTGTATCAGATATTAAAGATTATTATGTTGAGGATTATCATAAGTTGGTATTTTGAGTTTGAAGCTAATCTTATTCGTAATATAATAAGGTAATCTGTATGGTTGAATAATGTTTCAGGTTGTGCAGTTACAAGGAATTGAGGAGCAATTAATGAAATCAAATAATTGTGGATTATGTGAAATATGAAGTGAGGTTGGTGTTGTACTTTTATTACATATATATTCTCAAAATGTTTGTGAAGCAAAAACATCCTGTTGAAAAAAAAAATCGACATTGTCAACTTAGCTCTTCCCACCCATGTTGATGTTAGAAATATTAGAAGTTAATGAAAGTTCTATAACATTTTAGCATAATAAGGATATTGAATACTTGTAATAAATTTATATGTGAAATAGTTATCAAATTCTGGTGGAATGTTTGTAGCTTAATGAACCTGAACCAAATTGCAAACCAGT

mRNA sequence

TCGAAAAGCTATGTAATAGGTTTAGTGGAGTTTCAGATGTTAGACAGTGGGAATATATTTCATATTGCCTTTCTCAGCTCGGCTTCACAGAAAAGGGAATGAAAAAGTTGATAGATTCATTCAAGACATACGAACATGTTGTTTCGGAGGACTCTGTAATGGAACATTTCAAAAGCATCATAAACAAGAGTAAGAAATTTGCTAAACCAGAACTCAAGTTGTGCGTAGAAGAATTTGAAGAAAAACTAAACAAGGCTCATAAGGAAAGGAAGGAGCAGGAAGTTACTGCTAGAAATGCCGAGATTCATCAACAGAGAATTGATAATATTGAAACTACTTCTGTGGCAGTGAAAAATGAAGATCCTACAGAGTCCGAAATCACTGAAGATGAAAACACTGAATCATCTGAAGATGGTGAGTCAATAAATGACAATTCAGAACCTAAGTTCGTTGAGTCGGAAGATGGAACTTCCGGTGAGCTGACAGAGTCGGAAACTTGTAAAACTGAAATTCAATCACCCCAAGTTGAGAATGAAGGGACCTCCGATTTGCGAGTTAAGAGAAGAAGCTCACGTAGAAGAGGCATTTCTTCGTGAACTTATTGTTGTCTTTTGTTGTGCAGTTACAAGGAATTGAGGAGCAATTAATGAAATCAAATAATTGTGGATTATGTGAAATATGAAGTGAGGTTGGTGTTGTACTTTTATTACATATATATTCTCAAAATGTTTGTGAAGCAAAAACATCCTGTTGAAAAAAAAAATCGACATTGTCAACTTAGCTCTTCCCACCCATGTTGATGTTAGAAATATTAGAAGTTAATGAAAGTTCTATAACATTTTAGCATAATAAGGATATTGAATACTTGTAATAAATTTATATGTGAAATAGTTATCAAATTCTGGTGGAATGTTTGTAGCTTAATGAACCTGAACCAAATTGCAAACCAGT

Coding sequence (CDS)

ATGAAAAAGTTGATAGATTCATTCAAGACATACGAACATGTTGTTTCGGAGGACTCTGTAATGGAACATTTCAAAAGCATCATAAACAAGAGTAAGAAATTTGCTAAACCAGAACTCAAGTTGTGCGTAGAAGAATTTGAAGAAAAACTAAACAAGGCTCATAAGGAAAGGAAGGAGCAGGAAGTTACTGCTAGAAATGCCGAGATTCATCAACAGAGAATTGATAATATTGAAACTACTTCTGTGGCAGTGAAAAATGAAGATCCTACAGAGTCCGAAATCACTGAAGATGAAAACACTGAATCATCTGAAGATGGTGAGTCAATAAATGACAATTCAGAACCTAAGTTCGTTGAGTCGGAAGATGGAACTTCCGGTGAGCTGACAGAGTCGGAAACTTGTAAAACTGAAATTCAATCACCCCAAGTTGAGAATGAAGGGACCTCCGATTTGCGAGTTAAGAGAAGAAGCTCACGTAGAAGAGGCATTTCTTCGTGA
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR026971CND1/NCAPD3
Vocabulary: Biological Process
TermDefinition
GO:0007076mitotic chromosome condensation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:0007076 mitotic chromosome condensation
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C009772T2MELO3C009772T2mRNA
MELO3C009772T1MELO3C009772T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026971Condensin subunit 1/Condensin-2 complex subunit D3PANTHERPTHR14222CONDENSINcoord: 1..161
score: 2.2
NoneNo IPR availableunknownCoilCoilcoord: 43..63
scor
NoneNo IPR availablePANTHERPTHR14222:SF2CONDENSIN COMPLEX SUBUNIT 1coord: 1..161
score: 2.2

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None