MELO3C009749 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAAATGTAAATTGGCCAGTACTACAAACGGTGTTCGAATCAAAACATGGCCAGATTCTGTTGGCACGTTCCCAACCACTGACATGCATTTTGAAGATATAGAAATGGTTAATGTGAGTAATCCTATCATCATAGACCAAGAATATTGTCCATGGAACCAATGCAACCGAAAGGTACATCTAAAATTAGGCCTCCTTAGTTTTGAACTTATTAATTAACTCAAAAGACATCAATAATATTATTGTTCGAGTTATGTATTTTTATTATGTTTTCTTTGTTTGTTCAGGTTCCATAA ATGAAAAAATGTAAATTGGCCAGTACTACAAACGGTGTTCGAATCAAAACATGGCCAGATTCTGTTGGCACGTTCCCAACCACTGACATGCATTTTGAAGATATAGAAATGGTTAATGTGAGTAATCCTATCATCATAGACCAAGAATATTGTCCATGGAACCAATGCAACCGAAAGGTTCCATAA ATGAAAAAATGTAAATTGGCCAGTACTACAAACGGTGTTCGAATCAAAACATGGCCAGATTCTGTTGGCACGTTCCCAACCACTGACATGCATTTTGAAGATATAGAAATGGTTAATGTGAGTAATCCTATCATCATAGACCAAGAATATTGTCCATGGAACCAATGCAACCGAAAGGTTCCATAA MKKCKLASTTNGVRIKTWPDSVGTFPTTDMHFEDIEMVNVSNPIIIDQEYCPWNQCNRKVP*
BLAST of MELO3C009749 vs. Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.7e-19 Identity = 40/61 (65.57%), Postives = 46/61 (75.41%), Query Frame = 1
BLAST of MELO3C009749 vs. Swiss-Prot
Match: PGLR_BRANA (Polygalacturonase OS=Brassica napus PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.3e-16 Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 1
BLAST of MELO3C009749 vs. Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.8e-13 Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 1
BLAST of MELO3C009749 vs. Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.8e-13 Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 1
BLAST of MELO3C009749 vs. Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 2.3e-13 Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 1
BLAST of MELO3C009749 vs. TrEMBL
Match: A0A0A0LX75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066500 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 4.8e-26 Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 1
BLAST of MELO3C009749 vs. TrEMBL
Match: A0A0A0KF15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G434410 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.7e-23 Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 1
BLAST of MELO3C009749 vs. TrEMBL
Match: E3VSV7_CUCPE (Polygalacturonase OS=Cucurbita pepo GN=PG1 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.9e-23 Identity = 49/61 (80.33%), Postives = 55/61 (90.16%), Query Frame = 1
BLAST of MELO3C009749 vs. TrEMBL
Match: A0A0A0K6J6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037450 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.5e-22 Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 1
BLAST of MELO3C009749 vs. TrEMBL
Match: A0A0A0KPH7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G266870 PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.0e-20 Identity = 45/57 (78.95%), Postives = 50/57 (87.72%), Query Frame = 1
BLAST of MELO3C009749 vs. TAIR10
Match: AT5G48140.1 (AT5G48140.1 Pectin lyase-like superfamily protein) HSP 1 Score: 87.4 bits (215), Expect = 3.3e-18 Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 1
BLAST of MELO3C009749 vs. TAIR10
Match: AT3G07820.1 (AT3G07820.1 Pectin lyase-like superfamily protein) HSP 1 Score: 84.0 bits (206), Expect = 3.7e-17 Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 1
BLAST of MELO3C009749 vs. TAIR10
Match: AT3G07840.1 (AT3G07840.1 Pectin lyase-like superfamily protein) HSP 1 Score: 82.4 bits (202), Expect = 1.1e-16 Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 1
BLAST of MELO3C009749 vs. TAIR10
Match: AT3G07830.1 (AT3G07830.1 Pectin lyase-like superfamily protein) HSP 1 Score: 81.6 bits (200), Expect = 1.8e-16 Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 1
BLAST of MELO3C009749 vs. TAIR10
Match: AT4G18180.1 (AT4G18180.1 Pectin lyase-like superfamily protein) HSP 1 Score: 79.0 bits (193), Expect = 1.2e-15 Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 1
BLAST of MELO3C009749 vs. NCBI nr
Match: gi|659067859|ref|XP_008441641.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo]) HSP 1 Score: 129.4 bits (324), Expect = 2.2e-27 Identity = 56/61 (91.80%), Postives = 59/61 (96.72%), Query Frame = 1
BLAST of MELO3C009749 vs. NCBI nr
Match: gi|778658546|ref|XP_011652893.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 3.7e-27 Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 1
BLAST of MELO3C009749 vs. NCBI nr
Match: gi|700209485|gb|KGN64581.1| (hypothetical protein Csa_1G066500 [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 6.9e-26 Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 1
BLAST of MELO3C009749 vs. NCBI nr
Match: gi|659134134|ref|XP_008467043.1| (PREDICTED: exopolygalacturonase-like, partial [Cucumis melo]) HSP 1 Score: 120.9 bits (302), Expect = 7.7e-25 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 1
BLAST of MELO3C009749 vs. NCBI nr
Match: gi|659097567|ref|XP_008449696.1| (PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo]) HSP 1 Score: 120.2 bits (300), Expect = 1.3e-24 Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |