MELO3C009634 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C009634
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptiontRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
Locationchr4 : 29460265 .. 29461892 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTGACAAACATCTTGAGTTTCTTCTAGGGCAAACAGAAAGGTGTCTGATTTGATTTGACTGATAGGCTTGGCCTTTGATGTTGGGGGGGGAGGGGATGATTTTTAATGCATTATGTACAATATCTTCTTAATCCTTAACCCTGTACATTACAGCCTAATGAGATGAAATATCATGTTGTAACTTTAGGTACTCGACAATGCTGGCAGAAAATCTTGTGGAAACTTATAAACCATCGCAGGTGAATTCTACAAACGAGCCACACAATTTTCATGTCCAAGAGATTGACGAAAGCAAGGCTGTTGAACCTACAGAGTTAAATGTTGGTATGCTGAAAATTGTAATATTCTATGCGATTCCTTTTAAAAATGGTATAGTTTTTAAGTTGAAATAATTGAGAACATATTTCACAGAACACGAGTCAGATTCTGTGGAGTTCGATGAAGAATTCGATGTACACTCTGAAGATGAATCTGTAAGTCCATTTTTCCTTTCTCTACTGCATTAATATTTAATAGTAACTTAGTTGAGCGTTGTTGTCAGATGCCACTATTTTTAATTGACACATAAAGTTTGGTGGTTTGCTTCTTCCCTCTTTCCTTCTTTTCTTAGTTTTGTTTGAATCACCATAGGTTCAATTGTTACGGGGTAGGCATTAGGATAAAAAAAGTAGAGAACTTGTGAGATGTATGTTCAAACTTTGTAGTGATCATCTATTAGGGATAAAATTCTTTAAGACAACCAGATGTTGAAGCCTCAAGGGCCCAACAGTTATTGTATGGGATTACATGAGGTGTATTTGCTTTGGTTACTCACAGTAAAAAACAAAGAAGAAAGATATGAATGTTGTAACCTAAACCTTGTGGCGGCAGTTGGATTTGGATCCAGGGCCAATGTGTTTCATCAAGCAAGAATAATGAACGGATAAATGTCTGCAACTTTCACGGATGGTTATCTTACTTTGGTTCAAAATCCATGTGAGATTTCTTGACCACCAATTGGTGGGGCATAATTTAGCTCCTTAGCTCTTAAAATTTTTGACCTAACACTACTAGATTCATTCCTAGCTCCACCATAATTTTTATAATTAGCTCCTGCCTTTCAGTGTTTTTGGATGCTAAATTTCAATTTGTTCAGATAATATTTCTTGATACTTCATTGTACGTTATAGTATTCTTGCTTTGGAGATTTGTTGGAGGTCTCAATAGTAATCTTTGATGTCAATATTGTTTGGCACCTTTTTCTTTTTTTTTCTTATTGCTTTACATACTATGGACTCTTTTATGTTATTTGGCAGTTTGAATCTCAATTTCCTTACAAGTAATGTGGTTTGTCACAAATGTTTTAGGAAGATAATGAGCAGACCATAGATGAAGATGAAGCTTTAATAACTAAAGAAGAAAGGCAAGAAGAATTGGAAGCTTTACAAAATGAAGTGGATCTTCCTCTTGAAGAGCTTCTTAAAAGATATAGTGGAGAGAAAGGTGCGTGGTCAACCATTATCATTTTCTTATCTTTTAATCATGCATTTGACAGGCCAGGTTGATTTCTGATTAGTGGGTAAATAAGTTTGGGGCTTATTTGTTTTTGCAGATTCCTGGGCAGGTAATTTATATTATTATTATTAT

mRNA sequence

TCTTGACAAACATCTTGAGTTTCTTCTAGGGCAAACAGAAAGGTACTCGACAATGCTGGCAGAAAATCTTGTGGAAACTTATAAACCATCGCAGGTGAATTCTACAAACGAGCCACACAATTTTCATGTCCAAGAGATTGACGAAAGCAAGGCTGTTGAACCTACAGAGTTAAATGTTGAACACGAGTCAGATTCTGTGGAGTTCGATGAAGAATTCGATGTACACTCTGAAGATGAATCTGAAGATAATGAGCAGACCATAGATGAAGATGAAGCTTTAATAACTAAAGAAGAAAGGCAAGAAGAATTGGAAGCTTTACAAAATGAAGTGGATCTTCCTCTTGAAGAGCTTCTTAAAAGATATAGTGGAGAGAAAGGTGCGTGGTCAACCATTATCATTTTCTTATCTTTTAATCATGCATTTGACAGGCCAGGTTGATTTCTGATTAGTGGGTAAATAAGTTTGGGGCTTATTTGTTTTTGCAGATTCCTGGGCAGGTAATTTATATTATTATTATTAT

Coding sequence (CDS)

ATGCTGGCAGAAAATCTTGTGGAAACTTATAAACCATCGCAGGTGAATTCTACAAACGAGCCACACAATTTTCATGTCCAAGAGATTGACGAAAGCAAGGCTGTTGAACCTACAGAGTTAAATGTTGAACACGAGTCAGATTCTGTGGAGTTCGATGAAGAATTCGATGTACACTCTGAAGATGAATCTGAAGATAATGAGCAGACCATAGATGAAGATGAAGCTTTAATAACTAAAGAAGAAAGGCAAGAAGAATTGGAAGCTTTACAAAATGAAGTGGATCTTCCTCTTGAAGAGCTTCTTAAAAGATATAGTGGAGAGAAAGGTGCGTGGTCAACCATTATCATTTTCTTATCTTTTAATCATGCATTTGACAGGCCAGGTTGA

Protein sequence

MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEKGAWSTIIIFLSFNHAFDRPG*
Homology
[Close]
BLAST of MELO3C009634 vs. Swiss-Prot
Match: PIE1_ARATH (Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana GN=PIE1 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.7e-23
Identity = 62/108 (57.41%), Postives = 76/108 (70.37%), Query Frame = 1 

Query: 1   MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVE-PTELNVEH--ESDSVEFDEEFDV 60
           MLAENLVE YK  Q N+ ++P      + DE +A + P E+N     ES S E DE++D+
Sbjct: 157 MLAENLVEPYKQGQ-NTPSKPLLTIESKSDEERAEQIPPEINSSAGLESGSPELDEDYDL 216

Query: 61  HSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYS 106
            SEDE+ED+E TI+EDE   TK ERQEELEALQNEVDLP+EELL+RY+
Sbjct: 217 KSEDETEDDEDTIEEDEKHFTKRERQEELEALQNEVDLPVEELLRRYT 263

[Close]
BLAST of MELO3C009634 vs. TrEMBL
Match: A0A0A0LBB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G808390 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.8e-52
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 1 

Query: 1   MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSE 60
           MLAENLVETYKPSQVNSTNEPHN HVQEIDESKAVEPTELNVEHESDSV+FDEEFDVHSE
Sbjct: 250 MLAENLVETYKPSQVNSTNEPHNAHVQEIDESKAVEPTELNVEHESDSVDFDEEFDVHSE 309

Query: 61  DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEK 109
           DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEK
Sbjct: 310 DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEK 357

[Close]
BLAST of MELO3C009634 vs. TrEMBL
Match: A0A0A0LBB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G808390 PE=4 SV=1)

HSP 1 Score: 41.2 bits (95), Expect = 1.1e+00
Identity = 27/88 (30.68%), Postives = 45/88 (51.14%), Query Frame = 1 

Query: 23  NFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSED----ESEDNEQTIDEDEAL-- 82
           N   +E  E+K +    +    +    +F EE +    D    E +D+E T+ E+E L  
Sbjct: 416 NHTKRETRETKNLSTLPVAFPKDDVFYDFTEEREDGDYDFTGGEDKDDETTLSEEEKLDK 475

Query: 83  ITKEERQEELEALQNEVDLPLEELLKRY 105
           +     ++E+  LQNE ++P+EELL RY
Sbjct: 476 VESNNGKDEILMLQNESEIPIEELLARY 503


HSP 2 Score: 129.8 bits (325), Expect = 2.4e-27
Identity = 67/110 (60.91%), Postives = 85/110 (77.27%), Query Frame = 1 

Query: 1   MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNV-EHESDSVEFDEEFDVHS 60
           MLAENLV+ YKP++ NS     N   +++      EP E NV E++SD+ + DEE+DV S
Sbjct: 103 MLAENLVDAYKPAENNSAEHHMNVQCKDVHGDIINEPKEANVAEYQSDAADNDEEYDVQS 162

Query: 61  EDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEKG 110
           +DESED+E+TI+ DEALITKEERQEEL AL +E+DLP+EELLKRYSGEKG
Sbjct: 163 DDESEDDERTIELDEALITKEERQEELAALCDEMDLPIEELLKRYSGEKG 212

[Close]
BLAST of MELO3C009634 vs. TrEMBL
Match: A0A151SGP8_CAJCA (Helicase domino OS=Cajanus cajan GN=KK1_000114 PE=4 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-01
Identity = 25/74 (33.78%), Postives = 41/74 (55.41%), Query Frame = 1 

Query: 33  KAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEAL--ITKEERQEELEALQ 92
           K V    +N +   D  + +E+ D     E +D+E T+ E+E L  +   + ++E+  LQ
Sbjct: 286 KEVPSETVNEDFAYDFTDGEEDGDFLLGTEDKDDETTLSEEEKLERVDAIDPKDEIALLQ 345

Query: 93  NEVDLPLEELLKRY 105
            E D+P+EELL RY
Sbjct: 346 KESDMPVEELLARY 359


HSP 2 Score: 129.0 bits (323), Expect = 4.1e-27
Identity = 63/109 (57.80%), Postives = 84/109 (77.06%), Query Frame = 1 

Query: 1   MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSE 60
           MLAENLV+   P++ NS     +F  ++I      EP E NVE++SD+ + DEE+DV S+
Sbjct: 145 MLAENLVDANAPAEKNSAEHQMSFQCKDIGGDIINEPKEANVEYKSDAPDHDEEYDVQSD 204

Query: 61  DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEKG 110
           D S+D+EQT++EDEALITKEERQEEL AL +E+DLP+EELLKRY+G+KG
Sbjct: 205 DVSDDDEQTLEEDEALITKEERQEELAALHSEMDLPIEELLKRYAGDKG 253

[Close]
BLAST of MELO3C009634 vs. TrEMBL
Match: A0A072VUA9_MEDTR (Helicase OS=Medicago truncatula GN=MTR_1g053955 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-01
Identity = 33/96 (34.38%), Postives = 52/96 (54.17%), Query Frame = 1 

Query: 12  PSQVNSTNEPHNF-HVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTI 71
           P+   S NE H   +++E+    A E    NV  +    E D +F   +ED+  D+E T+
Sbjct: 319 PTNNLSQNEVHQSENLKEVPSEAANE----NVPFDFSDEEEDGDFLFGTEDK--DDETTL 378

Query: 72  DEDEAL--ITKEERQEELEALQNEVDLPLEELLKRY 105
            E+E L  +   + ++E+  LQ E D+P+EELL RY
Sbjct: 379 SEEEKLDRVDAIDPKDEIALLQKESDMPVEELLARY 408


HSP 2 Score: 127.1 bits (318), Expect = 1.6e-26
Identity = 68/112 (60.71%), Postives = 88/112 (78.57%), Query Frame = 1 

Query: 1   MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAV--EPTELNV-EHESDSVEFDEEFDV 60
           MLAENLV+ +K  + NS    H+  +Q  D    V  EP E +V E++SD+ + D+E+DV
Sbjct: 103 MLAENLVDAHKSGENNSAE--HHMSIQRKDAHGDVINEPKEADVVEYQSDAADNDDEYDV 162

Query: 61  HSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEKG 110
            S+DESED+EQTI++DEALITKEERQEELEALQNE++LP+EELLKRY+GEKG
Sbjct: 163 QSDDESEDDEQTIEQDEALITKEERQEELEALQNEMNLPIEELLKRYAGEKG 212

[Close]
BLAST of MELO3C009634 vs. TrEMBL
Match: A0A0L9TUD0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g025600 PE=4 SV=1)

HSP 1 Score: 42.7 bits (99), Expect = 3.8e-01
Identity = 36/116 (31.03%), Postives = 53/116 (45.69%), Query Frame = 1 

Query: 16  NSTNEPHNFHVQEIDESKA--VEPTELNVEHESDSVE---------FDEEFDVHSEDESE 75
           N TN       +  DES      PT+   ++E    E          +E+F     DE E
Sbjct: 248 NGTNNSSMVSGRRCDESDGDMATPTKNLSQYEEGQSENLKEVPSETANEDFSYDFTDE-E 307

Query: 76  DNEQTIDEDEAL--ITKEERQEELEALQNEVDLPLEELLKRY-----SGEKGAWST 114
           D+E T+ E+E L  +   + ++E+  LQ E D+P+EELL RY       E G + T
Sbjct: 308 DDETTLSEEEKLERVDAIDPKDEIALLQKESDMPVEELLARYKRDPSDNEDGGYET 362


HSP 2 Score: 127.1 bits (318), Expect = 1.6e-26
Identity = 68/112 (60.71%), Postives = 88/112 (78.57%), Query Frame = 1 

Query: 1   MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAV--EPTELNV-EHESDSVEFDEEFDV 60
           MLAENLV+ +K  + NS    H+  +Q  D    V  EP E +V E++SD+ + D+E+DV
Sbjct: 144 MLAENLVDAHKSGENNSAE--HHMSIQRKDAHGDVINEPKEADVVEYQSDAADNDDEYDV 203

Query: 61  HSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEKG 110
            S+DESED+EQTI++DEALITKEERQEELEALQNE++LP+EELLKRY+GEKG
Sbjct: 204 QSDDESEDDEQTIEQDEALITKEERQEELEALQNEMNLPIEELLKRYAGEKG 253

[Close]
BLAST of MELO3C009634 vs. TAIR10
Match: AT3G12810.1 (AT3G12810.1 SNF2 domain-containing protein / helicase domain-containing protein)

HSP 1 Score: 108.2 bits (269), Expect = 3.8e-24
Identity = 62/108 (57.41%), Postives = 76/108 (70.37%), Query Frame = 1 

Query: 1   MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVE-PTELNVEH--ESDSVEFDEEFDV 60
           MLAENLVE YK  Q N+ ++P      + DE +A + P E+N     ES S E DE++D+
Sbjct: 157 MLAENLVEPYKQGQ-NTPSKPLLTIESKSDEERAEQIPPEINSSAGLESGSPELDEDYDL 216

Query: 61  HSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYS 106
            SEDE+ED+E TI+EDE   TK ERQEELEALQNEVDLP+EELL+RY+
Sbjct: 217 KSEDETEDDEDTIEEDEKHFTKRERQEELEALQNEVDLPVEELLRRYT 263

[Close]
BLAST of MELO3C009634 vs. NCBI nr
Match: gi|659084771|ref|XP_008443065.1| (PREDICTED: LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 2.1e-53
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

Query: 1   MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSE 60
           MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSE
Sbjct: 144 MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSE 203

Query: 61  DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEK 109
           DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEK
Sbjct: 204 DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEK 251

[Close]
BLAST of MELO3C009634 vs. NCBI nr
Match: gi|659084771|ref|XP_008443065.1| (PREDICTED: LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucumis melo])

HSP 1 Score: 41.6 bits (96), Expect = 1.2e+00
Identity = 26/84 (30.95%), Postives = 45/84 (53.57%), Query Frame = 1 

Query: 27  QEIDESKAVEPTELNVEHESDSVEFDEEFDVHSED----ESEDNEQTIDEDEAL--ITKE 86
           +E  E+K +    +    ++   +F EE +    D    E +D+E T+ E+E L  +   
Sbjct: 314 RETRETKNLSTLPMAFPKDNVFYDFTEEREDGDYDFTGGEDKDDETTLSEEEKLDKVDSN 373

Query: 87  ERQEELEALQNEVDLPLEELLKRY 105
             ++E+  LQNE ++P+EELL RY
Sbjct: 374 NGKDEILMLQNESEIPIEELLARY 397


HSP 2 Score: 212.6 bits (540), Expect = 4.0e-52
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 1 

Query: 1   MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSE 60
           MLAENLVETYKPSQVNSTNEPHN HVQEIDESKAVEPTELNVEHESDSV+FDEEFDVHSE
Sbjct: 144 MLAENLVETYKPSQVNSTNEPHNAHVQEIDESKAVEPTELNVEHESDSVDFDEEFDVHSE 203

Query: 61  DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEK 109
           DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEK
Sbjct: 204 DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEK 251

[Close]
BLAST of MELO3C009634 vs. NCBI nr
Match: gi|778684791|ref|XP_011652096.1| (PREDICTED: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucumis sativus])

HSP 1 Score: 41.2 bits (95), Expect = 1.6e+00
Identity = 27/88 (30.68%), Postives = 45/88 (51.14%), Query Frame = 1 

Query: 23  NFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSED----ESEDNEQTIDEDEAL-- 82
           N   +E  E+K +    +    +    +F EE +    D    E +D+E T+ E+E L  
Sbjct: 310 NHTKRETRETKNLSTLPVAFPKDDVFYDFTEEREDGDYDFTGGEDKDDETTLSEEEKLDK 369

Query: 83  ITKEERQEELEALQNEVDLPLEELLKRY 105
           +     ++E+  LQNE ++P+EELL RY
Sbjct: 370 VESNNGKDEILMLQNESEIPIEELLARY 397


HSP 2 Score: 212.6 bits (540), Expect = 4.0e-52
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 1 

Query: 1   MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSE 60
           MLAENLVETYKPSQVNSTNEPHN HVQEIDESKAVEPTELNVEHESDSV+FDEEFDVHSE
Sbjct: 250 MLAENLVETYKPSQVNSTNEPHNAHVQEIDESKAVEPTELNVEHESDSVDFDEEFDVHSE 309

Query: 61  DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEK 109
           DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEK
Sbjct: 310 DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEK 357

[Close]
BLAST of MELO3C009634 vs. NCBI nr
Match: gi|700204177|gb|KGN59310.1| (hypothetical protein Csa_3G808390 [Cucumis sativus])

HSP 1 Score: 41.2 bits (95), Expect = 1.6e+00
Identity = 27/88 (30.68%), Postives = 45/88 (51.14%), Query Frame = 1 

Query: 23  NFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSED----ESEDNEQTIDEDEAL-- 82
           N   +E  E+K +    +    +    +F EE +    D    E +D+E T+ E+E L  
Sbjct: 416 NHTKRETRETKNLSTLPVAFPKDDVFYDFTEEREDGDYDFTGGEDKDDETTLSEEEKLDK 475

Query: 83  ITKEERQEELEALQNEVDLPLEELLKRY 105
           +     ++E+  LQNE ++P+EELL RY
Sbjct: 476 VESNNGKDEILMLQNESEIPIEELLARY 503


HSP 2 Score: 129.8 bits (325), Expect = 3.4e-27
Identity = 67/110 (60.91%), Postives = 85/110 (77.27%), Query Frame = 1 

Query: 1   MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNV-EHESDSVEFDEEFDVHS 60
           MLAENLV+ YKP++ NS     N   +++      EP E NV E++SD+ + DEE+DV S
Sbjct: 103 MLAENLVDAYKPAENNSAEHHMNVQCKDVHGDIINEPKEANVAEYQSDAADNDEEYDVQS 162

Query: 61  EDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEKG 110
           +DESED+E+TI+ DEALITKEERQEEL AL +E+DLP+EELLKRYSGEKG
Sbjct: 163 DDESEDDERTIELDEALITKEERQEELAALCDEMDLPIEELLKRYSGEKG 212

[Close]
BLAST of MELO3C009634 vs. NCBI nr
Match: gi|1012342757|gb|KYP53949.1| (Helicase domino [Cajanus cajan])

HSP 1 Score: 43.9 bits (102), Expect = 2.5e-01
Identity = 25/74 (33.78%), Postives = 41/74 (55.41%), Query Frame = 1 

Query: 33  KAVEPTELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEAL--ITKEERQEELEALQ 92
           K V    +N +   D  + +E+ D     E +D+E T+ E+E L  +   + ++E+  LQ
Sbjct: 286 KEVPSETVNEDFAYDFTDGEEDGDFLLGTEDKDDETTLSEEEKLERVDAIDPKDEIALLQ 345

Query: 93  NEVDLPLEELLKRY 105
            E D+P+EELL RY
Sbjct: 346 KESDMPVEELLARY 359


HSP 2 Score: 129.0 bits (323), Expect = 5.9e-27
Identity = 63/109 (57.80%), Postives = 84/109 (77.06%), Query Frame = 1 

Query: 1   MLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEPTELNVEHESDSVEFDEEFDVHSE 60
           MLAENLV+   P++ NS     +F  ++I      EP E NVE++SD+ + DEE+DV S+
Sbjct: 145 MLAENLVDANAPAEKNSAEHQMSFQCKDIGGDIINEPKEANVEYKSDAPDHDEEYDVQSD 204

Query: 61  DESEDNEQTIDEDEALITKEERQEELEALQNEVDLPLEELLKRYSGEKG 110
           D S+D+EQT++EDEALITKEERQEEL AL +E+DLP+EELLKRY+G+KG
Sbjct: 205 DVSDDDEQTLEEDEALITKEERQEELAALHSEMDLPIEELLKRYAGDKG 253

The following BLAST results are available for this feature:
BLAST of MELO3C009634 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PIE1_ARATH6.7e-2357.41Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana GN=PIE... [more]
BLAST of MELO3C009634 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBB6_CUCSA2.8e-5298.15Uncharacterized protein OS=Cucumis sativus GN=Csa_3G808390 PE=4 SV=1[more]
A0A0A0LBB6_CUCSA1.1e+0030.68Uncharacterized protein OS=Cucumis sativus GN=Csa_3G808390 PE=4 SV=1[more]
A0A151SGP8_CAJCA1.7e-0133.78Helicase domino OS=Cajanus cajan GN=KK1_000114 PE=4 SV=1[more]
A0A072VUA9_MEDTR1.0e-0134.38Helicase OS=Medicago truncatula GN=MTR_1g053955 PE=4 SV=1[more]
A0A0L9TUD0_PHAAN3.8e-0131.03Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g025600 PE=4 SV=1[more]
BLAST of MELO3C009634 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12810.13.8e-2457.41 SNF2 domain-containing protein / helicase domain-containing protein[more]
BLAST of MELO3C009634 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659084771|ref|XP_008443065.1|2.1e-53100.00PREDICTED: LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING ... [more]
gi|659084771|ref|XP_008443065.1|1.2e+0030.95PREDICTED: LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING ... [more]
gi|778684791|ref|XP_011652096.1|1.6e+0030.68PREDICTED: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Cucumis sativus][more]
gi|700204177|gb|KGN59310.1|1.6e+0030.68hypothetical protein Csa_3G808390 [Cucumis sativus][more]
gi|1012342757|gb|KYP53949.1|2.5e-0133.78Helicase domino [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048468 cell development
biological_process GO:0048449 floral organ formation
biological_process GO:0048438 floral whorl development
biological_process GO:0043933 macromolecular complex subunit organization
biological_process GO:0048827 phyllome development
biological_process GO:0090558 plant epidermis development
biological_process GO:0009909 regulation of flower development
biological_process GO:0033043 regulation of organelle organization
cellular_component GO:0044464 cell part
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C009634T1MELO3C009634T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 72..92
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C009634Cucumber (Chinese Long) v2cumeB223
MELO3C009634Cucumber (Chinese Long) v2cumeB553
MELO3C009634Watermelon (Charleston Gray)mewcgB315
MELO3C009634Watermelon (97103) v1mewmB346
MELO3C009634Cucurbita pepo (Zucchini)cpemeB571
MELO3C009634Cucurbita pepo (Zucchini)cpemeB797
MELO3C009634Bottle gourd (USVL1VR-Ls)lsimeB260
MELO3C009634Cucumber (Gy14) v2cgybmeB184
MELO3C009634Silver-seed gourdcarmeB0163
MELO3C009634Silver-seed gourdcarmeB0251
MELO3C009634Cucumber (Chinese Long) v3cucmeB218
MELO3C009634Watermelon (97103) v2mewmbB316
MELO3C009634Wax gourdmewgoB382
MELO3C009634Melon (DHL92) v3.5.1memeB085
MELO3C009634Cucumber (Gy14) v1cgymeB412
MELO3C009634Cucurbita maxima (Rimu)cmameB229
MELO3C009634Cucurbita maxima (Rimu)cmameB752
MELO3C009634Cucurbita moschata (Rifu)cmomeB215
MELO3C009634Cucurbita moschata (Rifu)cmomeB744
MELO3C009634Wild cucumber (PI 183967)cpimeB214