MELO3C009102.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTCTCGCCCTACCCCCCTCTATCCTCAAGCCTTGGGTTGCCAACTTCTTTGAAGAAAATGGTAGCCTAAGCGCCAATATACAATCCCATTCCATCCATACCGCTCACTATAATTTCACTCACAAACTGGAGACTCAGATCCCCACTAGAACGACCAGAATTAAATCGCTCCCAATACCGTTGGAAGAAGGGACTGAAATTTTCATGTCTCAGAAAGACTGTCAGATTCGAACTCGAAGCATATCTGAATTCAATTACCTGTTCATGGATTTCGTCTCAGAAAATCAGCCACATCATGCCCAGAAACTGTTGTCCAATATATCATCTTACGGTTTGGCCCCAAATTGTAGAACATATTTGATCATGATAAGATTCTATTGCAAGAAAGGAGAATTGGATAACGCAGGCAGGGTTTTGGAGCAAATGCTGGGAAGGGGTCATAACCCAAACGATGCGACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAGGCTTTAGAAATGGTTGAGCTGGTGGGAAGGAGGATTGGAGTTGGAGGCAGCAAGCCAACCGTTCAGGTTCAGACATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGAGAGTGGAAGAGGCCTGTGATGTTGACGAAAATGAAGAAGAATAGCTTGATACCCGACATTTACACGTATAAGGTTCTTATGGATGGCTTGTGTAAGGTCGGCAGATCAGACGAGGCATTGGAATTGCCCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTTGTCACTTTCAACACCCTCTTCAATGGCTATTGCAAGGAGGGCAGGCCAGTGGATGGAATCATGTGTTGA ATGCGTCTCGCCCTACCCCCCTCTATCCTCAAGCCTTGGGTTGCCAACTTCTTTGAAGAAAATGGTAGCCTAAGCGCCAATATACAATCCCATTCCATCCATACCGCTCACTATAATTTCACTCACAAACTGGAGACTCAGATCCCCACTAGAACGACCAGAATTAAATCGCTCCCAATACCGTTGGAAGAAGGGACTGAAATTTTCATGTCTCAGAAAGACTGTCAGATTCGAACTCGAAGCATATCTGAATTCAATTACCTGTTCATGGATTTCGTCTCAGAAAATCAGCCACATCATGCCCAGAAACTGTTGTCCAATATATCATCTTACGGTTTGGCCCCAAATTGTAGAACATATTTGATCATGATAAGATTCTATTGCAAGAAAGGAGAATTGGATAACGCAGGCAGGGTTTTGGAGCAAATGCTGGGAAGGGGTCATAACCCAAACGATGCGACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAGGCTTTAGAAATGGTTGAGCTGGTGGGAAGGAGGATTGGAGTTGGAGGCAGCAAGCCAACCGTTCAGGTTCAGACATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGAGAGTGGAAGAGGCCTGTGATGTTGACGAAAATGAAGAAGAATAGCTTGATACCCGACATTTACACGTATAAGGTTCTTATGGATGGCTTGTGTAAGGTCGGCAGATCAGACGAGGCATTGGAATTGCCCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTTGTCACTTTCAACACCCTCTTCAATGGCTATTGCAAGGAGGGCAGGCCAGTGGATGGAATCATGTGTTGA ATGCGTCTCGCCCTACCCCCCTCTATCCTCAAGCCTTGGGTTGCCAACTTCTTTGAAGAAAATGGTAGCCTAAGCGCCAATATACAATCCCATTCCATCCATACCGCTCACTATAATTTCACTCACAAACTGGAGACTCAGATCCCCACTAGAACGACCAGAATTAAATCGCTCCCAATACCGTTGGAAGAAGGGACTGAAATTTTCATGTCTCAGAAAGACTGTCAGATTCGAACTCGAAGCATATCTGAATTCAATTACCTGTTCATGGATTTCGTCTCAGAAAATCAGCCACATCATGCCCAGAAACTGTTGTCCAATATATCATCTTACGGTTTGGCCCCAAATTGTAGAACATATTTGATCATGATAAGATTCTATTGCAAGAAAGGAGAATTGGATAACGCAGGCAGGGTTTTGGAGCAAATGCTGGGAAGGGGTCATAACCCAAACGATGCGACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAGGCTTTAGAAATGGTTGAGCTGGTGGGAAGGAGGATTGGAGTTGGAGGCAGCAAGCCAACCGTTCAGGTTCAGACATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGAGAGTGGAAGAGGCCTGTGATGTTGACGAAAATGAAGAAGAATAGCTTGATACCCGACATTTACACGTATAAGGTTCTTATGGATGGCTTGTGTAAGGTCGGCAGATCAGACGAGGCATTGGAATTGCCCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTTGTCACTTTCAACACCCTCTTCAATGGCTATTGCAAGGAGGGCAGGCCAGTGGATGGAATCATGTGTTGA MRLALPPSILKPWVANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
BLAST of MELO3C009102.2 vs. NCBI nr
Match: XP_008443567.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like [Cucumis melo]) HSP 1 Score: 239.2 bits (609), Expect = 1.7e-59 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of MELO3C009102.2 vs. NCBI nr
Match: XP_022935128.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata]) HSP 1 Score: 122.1 bits (305), Expect = 3.1e-24 Identity = 78/142 (54.93%), Postives = 90/142 (63.38%), Query Frame = 0
BLAST of MELO3C009102.2 vs. NCBI nr
Match: XP_023528121.1 (pentatricopeptide repeat-containing protein At5g39710-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 121.3 bits (303), Expect = 5.2e-24 Identity = 78/142 (54.93%), Postives = 89/142 (62.68%), Query Frame = 0
BLAST of MELO3C009102.2 vs. NCBI nr
Match: XP_022982589.1 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 115.5 bits (288), Expect = 2.9e-22 Identity = 75/143 (52.45%), Postives = 89/143 (62.24%), Query Frame = 0
BLAST of MELO3C009102.2 vs. NCBI nr
Match: XP_022157329.1 (pentatricopeptide repeat-containing protein At1g09900-like [Momordica charantia]) HSP 1 Score: 100.1 bits (248), Expect = 1.2e-17 Identity = 66/125 (52.80%), Postives = 76/125 (60.80%), Query Frame = 0
BLAST of MELO3C009102.2 vs. TrEMBL
Match: tr|A0A1S3B7W4|A0A1S3B7W4_CUCME (pentatricopeptide repeat-containing protein At5g39710-like OS=Cucumis melo OX=3656 GN=LOC103487124 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of MELO3C009102.2 vs. TrEMBL
Match: tr|A0A022RNG3|A0A022RNG3_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a018881mg PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 2.8e-05 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0
BLAST of MELO3C009102.2 vs. TrEMBL
Match: tr|V4SQ57|V4SQ57_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10013314mg PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.8e-04 Identity = 34/70 (48.57%), Postives = 40/70 (57.14%), Query Frame = 0
BLAST of MELO3C009102.2 vs. TrEMBL
Match: tr|A0A061EQ47|A0A061EQ47_THECC (Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_019699 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.8e-04 Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 0
BLAST of MELO3C009102.2 vs. TrEMBL
Match: tr|A0A1R3KN51|A0A1R3KN51_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_06481 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.8e-04 Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |