MELO3C008987.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C008987.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Locationchr08 : 21752146 .. 21755970 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAGCTTTTGTTTGATGATTATTAGTTAAAAGTTGTGTGTTTTTTTCTGTGTGTTTTATTTGATGATTATTAGGTAGGATGACTTCATTCTCTGTAGAAGAGACTTCAAAACAAAGTTGTTCTAGTCTAGTGTTAGGAATTAAAGTTCCGGTTAAACCACCATCATCGGTATGGGAACATTTTATAAAAGTAGAAGGATGTGATCCTAAATATCCTAGGGTTGCTTGTAAACATTGTGGGGCTTCGTATGCTTGTGATTCCAAAAGAAATGGTACCACTAATTTAAAAAGACATATAGAGAAATGTAAGAATATGTAAATTCATTGGAAGATAATGTTGAAGGAGACGGAGATTCTGAAAGTAGTTTGATGGCTACATCATTCACACAAGAAAATTGTAGAACAATGCTTGCTAGTATGGTTATCTTGGATGAATTGCCATTTAAGTTTGTAGAAAGTGAAGGGTTTCACCAATTTTGTCGAGCATTAAATCCAAAGTTTATCAACAGTAACCGTTGCAAAGGATTGTTTTCAAATGTATATGGAGGAGAAAAAAAAAGTTAAAAAAATGTATTAACTCGAAGTGGCCAAAGAGTTTGTTTAACAACGGATACATGGACTTCTGTGGAAAATATTGATTATATGGTTATAACAGCTCATTTCATTGATGATGATTGAAACTTACATAAAAGAATTTTGAACTTTTGTCAAGTAGCTAATCATAAAGGAGATACAATAGGTAGAGCTGTTGAAAAGTGCTTAGAAGGTTGGGGTACTGATAGGCTCTTTACTGTAACAGTTGATAATGCGAGTTCAAATGATGTAGCCATTGCCTACTTCGTTAAAAAGTTTAAAGGCAAAAATGGATGGTGTTGGACTGTGAATTTATTCATATTAGATGTTGTGCCCATATTCTTAATTTAATTGTTAGTGATGCCTTAAAAGATTTGCATGTGTCTATCATTCAAATCAGAAATGTTGTGAAGTATGTTAGGTCATCTCCTACTAGATTGCAAATATTTAAAGATTTTGCTAATGAAGATAAGATGTCAACAAAAAATTGTCTTACGATGGATATGTACCAACACGATGGAATTCTACTTTCACTATGTTGGATAGAGCAATTAAGTGTCAAAAGACTTTTGAGAGATTAGAGGAGCATGACCCTAGTTATTTACCAAAGGATGATATTCCTACTGCTGAAGATTGAGATAATGCAAAAGTGTTTGGAAAGTTCCTACAGACTTTTTCAGCGATAACAATGAAGTTTTCTTCATCTATGTCTGTGACTTCAAACATATTTTTTCACGAACTATGTTTGATCCAAGAAATAATTCATGAATACTCATCGTATGAGAATGCATTATTGAGTTAGATGACATTAAGCATGTAGGCCAAATTCAATAAGTATTGGGGTATAACTACAAGTGAGAAGACCAATTTATTATTGTATGTTTTTGTAGTCCTTAACCCTAGGTACAAGTTAGCTTATGTGAATTATTGTTTTAATGAATTTTTGAAGGAAGATTGTGCAAAAATATGGACAAATAAGGTTGAAGAAACATTTCGTTGATTGTGTGATGATTATTATATGAGAATGTCAAAAGAAAAATATTCGCAAACACAATCATGTACACTTGTCGAAGGATTTGGCTTTCAAAGTCAAAGTGAATTGCCTTCTATCTCATCTAGTGAATCTTATAAGACACATGCTGCTGTTCATGATAGATTTAAACAAAGTAACAAAACATGTCTAGATGATGCTAAAATAGAGGTGGCTCGTTATCTGGATGAGGCTCGTATAGAAGATGAATATTTAGATTTTCTAACTTGGTGGAAGGTGAATTCTTCTCGATTTAAGATTATTAGCCAAGTAGCCAGGGATATCTACAACATTCCTATATCAACCGTGCCTTCTGAGTCTGCCTTTAGCACTGGAGGACGGGAGTTAGATTCTTTTCGAAGTTCTTTAATTCCTCAAACTGCAGAGGCACTCATTTGTGCTCAGAATTAGATTCAGTCTAAACCTTTGGATGACATGACTGAAGAAATTAACAGGACTGAAGAAATTGATGAAGGTAATGTTCTTTTTTAAGTACACATTTAAAATTTTCAATTGTTCCATATAAGTTAACAATTTGTCATTTTGATCTAGAATTCATAAACATATAAGCTGCATTTAGGTTTAAATCATTTACATTTTTTTATTATTTTAAATTATTAACTTGTTAAATATCGAATCTTGTTAATTCATTATTCATTTGAGAATCTGAATAATGACTTTATGGTTTAAATCCCCACTCTTAAATCTTTATTTACATTTTTTTTTTTTTTTATTTTAAATTGTTAACTTGTTAAATATTGAATCTTGTTGTTTAGAATCTTGAATTAGCACAGTGATGGAAGCACTTTGTGATAGTTTATTCTTCTTATGAGTTGGTTTTGTGAGGTGAGTTTTATTCCTAGATCTGAAGCATTGTTGTACTTTCCAGATTGTACCTAATCCTAGTAATGCATATACCAAAAAACTGGTGTTTTTTGGTTTTGCTTAGTTTCTTTATTTAGAAAATAGGCTAAAACAATGGTGTGGAATCATGTAATCAATTGACTCTTGAAAATATCAATGGTTATTTCAAATTTATTGTATGTGTCGTTAGTTTAGTTGATATATTTGTTTGCTACCATTAGTTACTGTAGTTTTTCACCATTCTTGTTCAAATATCAATAGAATACTGGAAATTTGTAATTGCATTGCTGCCTTTGAAGATTTTGATCTTGCAGTTGCAAGCAAAGCCATAGTTTTAGGGTTTAATGTTAAAGCATCAGGTTCTATCAAGATTTATGCAAAAAATAAAGGTGTCGAGATCAGGCTGTATAGAGTTATCTACGAGCTTATTGATGATGTTCGGAATGCAATGGAAGGACCCCTAGAACCTGTAGAGGTCAGTACTTAAAAGTCTTGCATTTCCGAGCTTTATCGACATAATATCCTAGTTTGTGAAGTGGTTTTCATTTTGGTTGTTATTTACAGGAGAGATTCATCCTCAGATATGCCTTAATCCTTAAGATCTGCAACTTGGTTTGCTGCATCTTAAGGCCATTGCACATTCACTTAAGCCATTTTTCATATTTGATGTTTAATGTGATTATTTGACCATGTATTTGTTATCATTAAAAAAATACATGAAAGCTCCTAAAATTGTCTTTTAACTTGCTTACTCTTCCTGTCAGTCCATGTGATTACAGCACACTTATATTGTTTTGATTTATATCGACTCACTCTGTCCATTGTGTAATAAATGATGTCCTCTGATTTTGCTTTTTGGTCTTAGTTTCTTTCTAATTTCAATGGCTAAAGATGTACAGCTAAAAATTTTCATTTGTCTTTAATAGGAAAAAATACCAATAGGGTCAGTAGAAGTCTGTGCAGTATTCAGTAGTGGCAGTGGTCTTGTTGCTGGATGCATGATAGTAGAAAGAAAACTGGTAAAGGGCTGTGGCATTGAGGAATGGTTGTAAGGGGAATTTAAGGGATTGTGAGAATGTCTACTTTTACTTATTGACAGAGATATAAAAGGTTTAGGGGTTCTACTTTTACTTTTACTTAAAAAAAAAAAGACCCGACCCAATTCATTTCGACCCGACCCGAATGTGGATCGACCCTAAGCCAAGGCTTGGAAGAGTGGTAGCAGTTCTTCGAACCTCATATTCGCAAGAAATGCACTATAGGGAGGTTAGCGAACTAAGAGCTAGCCTTGAGCGCTCGTAATCCAAGATTGAAGAACAACAAGATGACCTTGAAGAAGCTAATGGCTTGATTGAAGAA

mRNA sequence

ACAGCTTTTGTTTGATGATTATTAGTTAAAAGTTGTGTGTTTTTTTCTGTGTGTTTTATTTGATGATTATTAGGTAGGATGACTTCATTCTCTGTAGAAGAGACTTCAAAACAAAGTTGTTCTAGTCTAGTGTTAGGAATTAAAGTTCCGGTTAAACCACCATCATCGGTATGGGAACATTTTATAAAAGTAGAAGGATGTGATCCTAAATATCCTAGGGTTGCTTGTAAACATTGTGGGGCTTCGTATGCTTGTGATTCCAAAAGAAATGGTACCACTAATTTAAAAAGACATATAGAGAAATGTAAGAATATGTAAATTCATTGGAAGATAATGTTGAAGGAGACGGAGATTCTGAAAGTAGTTTGATGGCTACATCATTCACACAAGAAAATTGTAGAACAATGCTTGCTAGTATGGTTATCTTGGATGAATTGCCATTTAAGTTTGTAGAAAGTGAAGGGTTTCACCAATTTTGTCGAGCATTAAATCCAAAGTTTATCAACAGTAACCGTTGCAAAGGATTGTTTTCAAATGTATATGGAGGAGAAAAAAAAAGTTAAAAAAATGTATTAACTCGAAGTGGCCAAAGAGTTTGTTTAACAACGGATACATGGACTTCTGTGGAAAATATTGATTATATGGTTATAACAGCTCATTTCATTGATGATGATTGAAACTTACATAAAAGAATTTTGAACTTTTGTCAAGTAGCTAATCATAAAGGAGATACAATAGGTAGAGCTGTTGAAAAGTGCTTAGAAGGTTGGGGTACTGATAGGCTCTTTACTGTAACAGTTGATAATGCGAGTTCAAATGATGTAGCCATTGCCTACTTCGTTAAAAAGTTTAAAGGCAAAAATGGATGGTGTTGGACTGTGAATTTATTCATATTAGATGTTGTGCCCATATTCTTAATTTAATTGTTAGTGATGCCTTAAAAGATTTGCATGTGTCTATCATTCAAATCAGAAATGTTGTGAAGTATGTTAGGTCATCTCCTACTAGATTGCAAATATTTAAAGATTTTGCTAATGAAGATAAGATGTCAACAAAAAATTGTCTTACGATGGATATGTACCAACACGATGGAATTCTACTTTCACTATGTTGGATAGAGCAATTAAGTGTCAAAAGACTTTTGAGAGATTAGAGGAGCATGACCCTAGTTATTTACCAAAGGATGATATTCCTACTGCTGAAGATTGAGATAATGCAAAAGTGTTTGGAAAGTTCCTACAGACTTTTTCAGCGATAACAATGAAGTTTTCTTCATCTATGTCTGTGACTTCAAACATATTTTTTCACGAACTATGTTTGATCCAAGAAATAATTCATGAATACTCATCGTATGAGAATGCATTATTGAGTTAGATGACATTAAGCATGTAGGCCAAATTCAATAAGTATTGGGGTATAACTACAAGTGAGAAGACCAATTTATTATTGTATGTTTTTGTAGTCCTTAACCCTAGGTACAAGTTAGCTTATGTGAATTATTGTTTTAATGAATTTTTGAAGGAAGATTGTGCAAAAATATGGACAAATAAGGTTGAAGAAACATTTCGTTGATTGTGTGATGATTATTATATGAGAATGTCAAAAGAAAAATATTCGCAAACACAATCATGTACACTTGTCGAAGGATTTGGCTTTCAAAGTCAAAGTGAATTGCCTTCTATCTCATCTAGTGAATCTTATAAGACACATGCTGCTGTTCATGATAGATTTAAACAAAGTAACAAAACATGTCTAGATGATGCTAAAATAGAGGTGGCTCGTTATCTGGATGAGGCTCGTATAGAAGATGAATATTTAGATTTTCTAACTTGGTGGAAGGTGAATTCTTCTCGATTTAAGATTATTAGCCAAGTAGCCAGGGATATCTACAACATTCCTATATCAACCGTGCCTTCTGAGTCTGCCTTTAGCACTGGAGGACGGGAGTTAGATTCTTTTCGAAGTTCTTTAATTCCTCAAACTGCAGAGGCACTCATTTGTGCTCAGAATTAGATTCAGTCTAAACCTTTGGATGACATGACTGAAGAAATTAACAGGACTGAAGAAATTGATGAAGGTAATGTTCTTTTTTAAGTACACATTTAAAATTTTCAATTGTTCCATATAAGTTAACAATTTGTCATTTTGATCTAGAATTCATAAACATATAAGCTGCATTTAGGTTTAAATCATTTACATTTTTTTATTATTTTAAATTATTAACTTGTTAAATATCGAATCTTGTTAATTCATTATTCATTTGAGAATCTGAATAATGACTTTATGGTTTAAATCCCCACTCTTAAATCTTTATTTACATTTTTTTTTTTTTTTATTTTAAATTGTTAACTTGTTAAATATTGAATCTTGTTGTTTAGAATCTTGAATTAGCACAGTGATGGAAGCACTTTGTGATAGTTTATTCTTCTTATGAGTTGGTTTTGTGAGGTGAGTTTTATTCCTAGATCTGAAGCATTGTTGTACTTTCCAGATTGTACCTAATCCTAGTAATGCATATACCAAAAAACTGGTGTTTTTTGGTTTTGCTTAGTTTCTTTATTTAGAAAATAGGCTAAAACAATGGTGTGGAATCATGTAATCAATTGACTCTTGAAAATATCAATGGTTATTTCAAATTTATTGTATGTGTCGTTAGTTTAGTTGATATATTTGTTTGCTACCATTAGTTACTGTAGTTTTTCACCATTCTTGTTCAAATATCAATAGAATACTGGAAATTTGTAATTGCATTGCTGCCTTTGAAGATTTTGATCTTGCAGTTGCAAGCAAAGCCATAGTTTTAGGGTTTAATGTTAAAGCATCAGGTTCTATCAAGATTTATGCAAAAAATAAAGGTGTCGAGATCAGGCTGTATAGAGTTATCTACGAGCTTATTGATGATGTTCGGAATGCAATGGAAGGACCCCTAGAACCTGTAGAGGAGAGATTCATCCTCAGATATGCCTTAATCCTTAAGATCTGCAACTTGGTTTGCTGCATCTTAAGGCCATTGCACATTCACTTAAGCCATTTTTCATATTTGATGTTTAATGTGATTATTTGACCATGTATTTGTTATCATTAAAAAAATACATGAAAGCTCCTAAAATTGTCTTTTAACTTGCTTACTCTTCCTGTCAGTCCATGTGATTACAGCACACTTATATTGTTTTGATTTATATCGACTCACTCTGTCCATTGTGTAATAAATGATGTCCTCTGATTTTGCTTTTTGGTCTTAGTTTCTTTCTAATTTCAATGGCTAAAGATGTACAGCTAAAAATTTTCATTTGTCTTTAATAGGAAAAAATACCAATAGGGTCAGTAGAAGTCTGTGCAGTATTCAGTAGTGGCAGTGGTCTTGTTGCTGGATGCATGATAGTAGAAAGAAAACTGGTAAAGGGCTGTGGCATTGAGGAATGGTTGTAAGGGGAATTTAAGGGATTGTGAGAATGTCTACTTTTACTTATTGACAGAGATATAAAAGGTTTAGGGGTTCTACTTTTACTTTTACTTAAAAAAAAAAAGACCCGACCCAATTCATTTCGACCCGACCCGAATGTGGATCGACCCTAAGCCAAGGCTTGGAAGAGTGGTAGCAGTTCTTCGAACCTCATATTCGCAAGAAATGCACTATAGGGAGGTTAGCGAACTAAGAGCTAGCCTTGAGCGCTCGTAATCCAAGATTGAAGAACAACAAGATGACCTTGAAGAAGCTAATGGCTTGATTGAAGAA

Coding sequence (CDS)

ATGAGAATGTCAAAAGAAAAATATTCGCAAACACAATCATGTACACTTGTCGAAGGATTTGGCTTTCAAAGTCAAAGTGAATTGCCTTCTATCTCATCTAGTGAATCTTATAAGACACATGCTGCTGTTCATGATAGATTTAAACAAAGTAACAAAACATGTCTAGATGATGCTAAAATAGAGGTGGCTCGTTATCTGGATGAGGCTCGTATAGAAGATGAATATTTAGATTTTCTAACTTGGTGGAAGGTGAATTCTTCTCGATTTAAGATTATTAGCCAAGTAGCCAGGGATATCTACAACATTCCTATATCAACCGTGCCTTCTGAGTCTGCCTTTAGCACTGGAGGACGGGAGTTAGATTCTTTTCGAAGTTCTTTAATTCCTCAAACTGCAGAGGCACTCATTTGTGCTCAGAATTAG

Protein sequence

MRMSKEKYSQTQSCTLVEGFGFQSQSELPSISSSESYKTHAAVHDRFKQSNKTCLDDAKIEVARYLDEARIEDEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGGRELDSFRSSLIPQTAEALICAQN
Homology
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BLAST of MELO3C008987.2 vs. NCBI nr
Match: ADN33674.1 (transposase [Cucumis melo subsp. melo])

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61
Identity = 125/143 (87.41%), Postives = 130/143 (90.91%), Query Frame = 0 

Query: 1   MRMSKEKYSQTQSCTLVEGFGFQSQSELPSISSSESYKTHAAVHDRFKQSNKTCLDDAKI 60
           MRMSKEKYSQTQSCT +EGFGFQSQSE+PSISSS SYK  A VHDRFKQSNKTCLDDAK 
Sbjct: 174 MRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFKQSNKTCLDDAKT 233

Query: 61  EVARYLDEARIE---DEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGG 120
           EV RYLDEARI+   DEYLD LTWWKVN+SRFKIISQVARDIY+IPISTVPSESAFSTGG
Sbjct: 234 EVTRYLDEARIDCMGDEYLDLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFSTGG 293

Query: 121 RELDSFRSSLIPQTAEALICAQN 141
           R LDSFRSSL PQTAEALICAQN
Sbjct: 294 RVLDSFRSSLTPQTAEALICAQN 316

[Close]
BLAST of MELO3C008987.2 vs. NCBI nr
Match: ACX85638.1 (putative transposase [Cucumis melo])

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61
Identity = 125/143 (87.41%), Postives = 130/143 (90.91%), Query Frame = 0 

Query: 1   MRMSKEKYSQTQSCTLVEGFGFQSQSELPSISSSESYKTHAAVHDRFKQSNKTCLDDAKI 60
           MRMSKEKYSQTQSCT +EGFGFQSQSE+PSISSS SYK  A VHDRFKQSNKTCLDDAK 
Sbjct: 507 MRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFKQSNKTCLDDAKT 566

Query: 61  EVARYLDEARIE---DEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGG 120
           EV RYLDEARI+   DEYLD LTWWKVN+SRFKIISQVARDIY+IPISTVPSESAFSTGG
Sbjct: 567 EVTRYLDEARIDCMGDEYLDLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFSTGG 626

Query: 121 RELDSFRSSLIPQTAEALICAQN 141
           R LDSFRSSL PQTAEALICAQN
Sbjct: 627 RVLDSFRSSLTPQTAEALICAQN 649

[Close]
BLAST of MELO3C008987.2 vs. NCBI nr
Match: XP_016903394.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 1.0e-60
Identity = 124/143 (86.71%), Postives = 128/143 (89.51%), Query Frame = 0 

Query: 1   MRMSKEKYSQTQSCTLVEGFGFQSQSELPSISSSESYKTHAAVHDRFKQSNKTCLDDAKI 60
           MRMSKEKYSQTQSCT +EGFGFQSQSE+PSISSS SYK HA VH RFKQSNKTCLDDAK 
Sbjct: 85  MRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKAHAIVHHRFKQSNKTCLDDAKT 144

Query: 61  EVARYLDEAR---IEDEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGG 120
           EVARYLDEAR   I+DEYLD LTWWKVNSSRFKIISQVARDIY+IPISTVPSES FSTGG
Sbjct: 145 EVARYLDEARIYSIDDEYLDLLTWWKVNSSRFKIISQVARDIYSIPISTVPSESIFSTGG 204

Query: 121 RELDSFRSSLIPQTAEALICAQN 141
           R LDSFRSSL PQ AE LICAQN
Sbjct: 205 RVLDSFRSSLTPQIAEVLICAQN 227

[Close]
BLAST of MELO3C008987.2 vs. NCBI nr
Match: XP_008464607.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 4-like [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 1.6e-58
Identity = 120/140 (85.71%), Postives = 123/140 (87.86%), Query Frame = 0 

Query: 1   MRMSKEKYSQTQSCTLVEGFGFQSQSELPSISSSESYKTHAAVHDRFKQSNKTCLDDAKI 60
           MRMSKEKYSQTQSCT +EGF FQSQS +PSIS S SYK   AVH+ FKQSNKTC DDAK 
Sbjct: 1   MRMSKEKYSQTQSCTPIEGFDFQSQSGIPSISPSGSYKARVAVHNIFKQSNKTCRDDAKT 60

Query: 61  EVARYLDEARIEDEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGGREL 120
           EV RYLDEARIEDEYLD L WWKVNSSRFKIISQVARDIY IPISTVPSESAFSTGGR L
Sbjct: 61  EVTRYLDEARIEDEYLDLLNWWKVNSSRFKIISQVARDIYIIPISTVPSESAFSTGGRVL 120

Query: 121 DSFRSSLIPQTAEALICAQN 141
           DSFRSSL PQTAEALICAQN
Sbjct: 121 DSFRSSLTPQTAEALICAQN 140

[Close]
BLAST of MELO3C008987.2 vs. NCBI nr
Match: XP_016899471.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo] >XP_016899472.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 231.1 bits (588), Expect = 2.3e-57
Identity = 116/140 (82.86%), Postives = 121/140 (86.43%), Query Frame = 0 

Query: 1   MRMSKEKYSQTQSCTLVEGFGFQSQSELPSISSSESYKTHAAVHDRFKQSNKTCLDDAKI 60
           MRMSKEKYSQTQSCT +EGF FQSQSE+PSISSS SYK    VHDRFKQSNKTCLDDAK 
Sbjct: 174 MRMSKEKYSQTQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFKQSNKTCLDDAKT 233

Query: 61  EVARYLDEARIEDEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGGREL 120
           EV RYLDEA I+DEYLD L WWKVNSSRFKIISQV RD+Y+IPIS VPSE AFSTGGR L
Sbjct: 234 EVTRYLDEAHIKDEYLDLLNWWKVNSSRFKIISQVVRDMYSIPISIVPSEFAFSTGGRVL 293

Query: 121 DSFRSSLIPQTAEALICAQN 141
            SFRSSL PQTAE LICAQN
Sbjct: 294 TSFRSSLTPQTAEPLICAQN 313

[Close]
BLAST of MELO3C008987.2 vs. TAIR10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain)

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-13
Identity = 35/89 (39.33%), Postives = 55/89 (61.80%), Query Frame = 0 

Query: 52  KTCLDDAKIEVARYLDEARI-EDEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSE 111
           +T   + K E+ +YLDE  +   +  D L WWK N  ++  +S++ARDI +IP+S    +
Sbjct: 583 ETTGQNLKSELDQYLDETLLPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFD 642

Query: 112 SAFSTGGRELDSFRSSLIPQTAEALICAQ 140
             F    RE+D +++SL P+T EALICA+
Sbjct: 643 YVFDMEPREMDEYKTSLRPETVEALICAR 671

[Close]
BLAST of MELO3C008987.2 vs. TAIR10
Match: AT1G18560.1 (BED zinc finger ;hAT family dimerisation domain)

HSP 1 Score: 51.2 bits (121), Expect = 5.9e-07
Identity = 25/80 (31.25%), Postives = 43/80 (53.75%), Query Frame = 0 

Query: 61  EVARYLDEARIEDEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGGREL 120
           E+ +YL E+ I     D L WWKVNS R+  +S +ARD   +  ++   E  F   G E+
Sbjct: 569 ELTQYLSES-IVPMQTDVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKGEEI 628

Query: 121 DSFRSSLIPQTAEALICAQN 141
           D  +  +   + +++IC ++
Sbjct: 629 DKQKYCMPHDSTQSVICIRS 647

[Close]
BLAST of MELO3C008987.2 vs. Swiss-Prot
Match: sp|Q6AVI0|RSLE2_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.0e-13
Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 0 

Query: 59  KIEVARYLDEA---RIEDEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPS-ESAFS 118
           K E+ +YLDE+   RI++   D L WWK+N+ +F  +S++ARDI  IP+S V S  S FS
Sbjct: 615 KSELEQYLDESLTPRIQE--FDILNWWKLNTLKFPTLSRMARDILAIPMSMVSSGNSIFS 674

Query: 119 --TGGRELDSFRSSLIPQTAEALICAQN 141
             TG R LD +RSSL P+  EAL+CA++
Sbjct: 675 AGTGTRMLDDYRSSLRPEIVEALVCAKD 700

[Close]
BLAST of MELO3C008987.2 vs. Swiss-Prot
Match: sp|Q75HY5|RSLE3_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-12
Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = 0 

Query: 61  EVARYLDEA---RIEDEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSE----SAF 120
           E+ +YL+EA   RI+D   + L WWK+N+ +F  +S++ARD+  IP+S V S     SA 
Sbjct: 647 ELEQYLEEALMPRIQD--FEILEWWKLNTIKFPTLSKMARDVLAIPMSMVSSGSSIFSAT 706

Query: 121 STGGRELDSFRSSLIPQTAEALICAQN 141
           +TG + LD +RSSL P+T EAL CA++
Sbjct: 707 ATGSQMLDDYRSSLRPETVEALFCAKD 731

[Close]
BLAST of MELO3C008987.2 vs. Swiss-Prot
Match: sp|Q9M2N5|DSLE_ARATH (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.5e-12
Identity = 35/89 (39.33%), Postives = 55/89 (61.80%), Query Frame = 0 

Query: 52  KTCLDDAKIEVARYLDEARI-EDEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSE 111
           +T   + K E+ +YLDE  +   +  D L WWK N  ++  +S++ARDI +IP+S    +
Sbjct: 583 ETTGQNLKSELDQYLDETLLPRVQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFD 642

Query: 112 SAFSTGGRELDSFRSSLIPQTAEALICAQ 140
             F    RE+D +++SL P+T EALICA+
Sbjct: 643 YVFDMEPREMDEYKTSLRPETVEALICAR 671

[Close]
BLAST of MELO3C008987.2 vs. Swiss-Prot
Match: sp|P08770|TRA1_MAIZE (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 7.7e-12
Identity = 33/81 (40.74%), Postives = 53/81 (65.43%), Query Frame = 0 

Query: 61  EVARYLDEARIEDE-YLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGGRE 120
           E+ +Y+ E  ++     D L+WW+   + + I++Q+ARD+  I +STV SESAFS GGR 
Sbjct: 669 ELDKYMSEPLLKHSGQFDILSWWRGRVAEYPILTQIARDVLAIQVSTVASESAFSAGGRV 728

Query: 121 LDSFRSSLIPQTAEALICAQN 141
           +D +R+ L  +  EALIC ++
Sbjct: 729 VDPYRNRLGSEIVEALICTKD 749

[Close]
BLAST of MELO3C008987.2 vs. Swiss-Prot
Match: sp|P03010|TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.7e-12
Identity = 33/81 (40.74%), Postives = 53/81 (65.43%), Query Frame = 0 

Query: 61  EVARYLDEARIEDE-YLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGGRE 120
           E+ +Y+ E  ++     D L+WW+   + + I++Q+ARD+  I +STV SESAFS GGR 
Sbjct: 638 ELDKYMSEPLLKHSGQFDILSWWRGRVAEYPILTQIARDVLAIQVSTVASESAFSAGGRV 697

Query: 121 LDSFRSSLIPQTAEALICAQN 141
           +D +R+ L  +  EALIC ++
Sbjct: 698 VDPYRNRLGSEIVEALICTKD 718

[Close]
BLAST of MELO3C008987.2 vs. TrEMBL
Match: tr|D0UIX2|D0UIX2_CUCME (Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.8e-62
Identity = 125/143 (87.41%), Postives = 130/143 (90.91%), Query Frame = 0 

Query: 1   MRMSKEKYSQTQSCTLVEGFGFQSQSELPSISSSESYKTHAAVHDRFKQSNKTCLDDAKI 60
           MRMSKEKYSQTQSCT +EGFGFQSQSE+PSISSS SYK  A VHDRFKQSNKTCLDDAK 
Sbjct: 507 MRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFKQSNKTCLDDAKT 566

Query: 61  EVARYLDEARIE---DEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGG 120
           EV RYLDEARI+   DEYLD LTWWKVN+SRFKIISQVARDIY+IPISTVPSESAFSTGG
Sbjct: 567 EVTRYLDEARIDCMGDEYLDLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFSTGG 626

Query: 121 RELDSFRSSLIPQTAEALICAQN 141
           R LDSFRSSL PQTAEALICAQN
Sbjct: 627 RVLDSFRSSLTPQTAEALICAQN 649

[Close]
BLAST of MELO3C008987.2 vs. TrEMBL
Match: tr|E5GB32|E5GB32_CUCME (Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.8e-62
Identity = 125/143 (87.41%), Postives = 130/143 (90.91%), Query Frame = 0 

Query: 1   MRMSKEKYSQTQSCTLVEGFGFQSQSELPSISSSESYKTHAAVHDRFKQSNKTCLDDAKI 60
           MRMSKEKYSQTQSCT +EGFGFQSQSE+PSISSS SYK  A VHDRFKQSNKTCLDDAK 
Sbjct: 174 MRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFKQSNKTCLDDAKT 233

Query: 61  EVARYLDEARIE---DEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGG 120
           EV RYLDEARI+   DEYLD LTWWKVN+SRFKIISQVARDIY+IPISTVPSESAFSTGG
Sbjct: 234 EVTRYLDEARIDCMGDEYLDLLTWWKVNASRFKIISQVARDIYSIPISTVPSESAFSTGG 293

Query: 121 RELDSFRSSLIPQTAEALICAQN 141
           R LDSFRSSL PQTAEALICAQN
Sbjct: 294 RVLDSFRSSLTPQTAEALICAQN 316

[Close]
BLAST of MELO3C008987.2 vs. TrEMBL
Match: tr|A0A1S4E592|A0A1S4E592_CUCME (zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo OX=3656 GN=LOC107992164 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 6.6e-61
Identity = 124/143 (86.71%), Postives = 128/143 (89.51%), Query Frame = 0 

Query: 1   MRMSKEKYSQTQSCTLVEGFGFQSQSELPSISSSESYKTHAAVHDRFKQSNKTCLDDAKI 60
           MRMSKEKYSQTQSCT +EGFGFQSQSE+PSISSS SYK HA VH RFKQSNKTCLDDAK 
Sbjct: 85  MRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKAHAIVHHRFKQSNKTCLDDAKT 144

Query: 61  EVARYLDEAR---IEDEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGG 120
           EVARYLDEAR   I+DEYLD LTWWKVNSSRFKIISQVARDIY+IPISTVPSES FSTGG
Sbjct: 145 EVARYLDEARIYSIDDEYLDLLTWWKVNSSRFKIISQVARDIYSIPISTVPSESIFSTGG 204

Query: 121 RELDSFRSSLIPQTAEALICAQN 141
           R LDSFRSSL PQ AE LICAQN
Sbjct: 205 RVLDSFRSSLTPQIAEVLICAQN 227

[Close]
BLAST of MELO3C008987.2 vs. TrEMBL
Match: tr|A0A1S3CNE8|A0A1S3CNE8_CUCME (zinc finger BED domain-containing protein RICESLEEPER 4-like OS=Cucumis melo OX=3656 GN=LOC103502449 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-58
Identity = 120/140 (85.71%), Postives = 123/140 (87.86%), Query Frame = 0 

Query: 1   MRMSKEKYSQTQSCTLVEGFGFQSQSELPSISSSESYKTHAAVHDRFKQSNKTCLDDAKI 60
           MRMSKEKYSQTQSCT +EGF FQSQS +PSIS S SYK   AVH+ FKQSNKTC DDAK 
Sbjct: 1   MRMSKEKYSQTQSCTPIEGFDFQSQSGIPSISPSGSYKARVAVHNIFKQSNKTCRDDAKT 60

Query: 61  EVARYLDEARIEDEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGGREL 120
           EV RYLDEARIEDEYLD L WWKVNSSRFKIISQVARDIY IPISTVPSESAFSTGGR L
Sbjct: 61  EVTRYLDEARIEDEYLDLLNWWKVNSSRFKIISQVARDIYIIPISTVPSESAFSTGGRVL 120

Query: 121 DSFRSSLIPQTAEALICAQN 141
           DSFRSSL PQTAEALICAQN
Sbjct: 121 DSFRSSLTPQTAEALICAQN 140

[Close]
BLAST of MELO3C008987.2 vs. TrEMBL
Match: tr|A0A1S4DU07|A0A1S4DU07_CUCME (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.5e-57
Identity = 116/140 (82.86%), Postives = 121/140 (86.43%), Query Frame = 0 

Query: 1   MRMSKEKYSQTQSCTLVEGFGFQSQSELPSISSSESYKTHAAVHDRFKQSNKTCLDDAKI 60
           MRMSKEKYSQTQSCT +EGF FQSQSE+PSISSS SYK    VHDRFKQSNKTCLDDAK 
Sbjct: 174 MRMSKEKYSQTQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFKQSNKTCLDDAKT 233

Query: 61  EVARYLDEARIEDEYLDFLTWWKVNSSRFKIISQVARDIYNIPISTVPSESAFSTGGREL 120
           EV RYLDEA I+DEYLD L WWKVNSSRFKIISQV RD+Y+IPIS VPSE AFSTGGR L
Sbjct: 234 EVTRYLDEAHIKDEYLDLLNWWKVNSSRFKIISQVVRDMYSIPISIVPSEFAFSTGGRVL 293

Query: 121 DSFRSSLIPQTAEALICAQN 141
            SFRSSL PQTAE LICAQN
Sbjct: 294 TSFRSSLTPQTAEPLICAQN 313

The following BLAST results are available for this feature:
BLAST of MELO3C008987.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN33674.11.2e-6187.41transposase [Cucumis melo subsp. melo][more]
ACX85638.11.2e-6187.41putative transposase [Cucumis melo][more]
XP_016903394.11.0e-6086.71PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis... [more]
XP_008464607.11.6e-5885.71PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 4-like [Cucumis... [more]
XP_016899471.12.3e-5782.86PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform ... [more]
BLAST of MELO3C008987.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G42170.12.5e-1339.33BED zinc finger ;hAT family dimerisation domain[more]
AT1G18560.15.9e-0731.25BED zinc finger ;hAT family dimerisation domain[more]
BLAST of MELO3C008987.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6AVI0|RSLE2_ORYSJ9.0e-1348.86Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j... [more]
sp|Q75HY5|RSLE3_ORYSJ2.0e-1245.98Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j... [more]
sp|Q9M2N5|DSLE_ARATH4.5e-1239.33Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=... [more]
sp|P08770|TRA1_MAIZE7.7e-1240.74Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2[more]
sp|P03010|TRAC9_MAIZE7.7e-1240.74Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1[more]
BLAST of MELO3C008987.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|D0UIX2|D0UIX2_CUCME7.8e-6287.41Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1[more]
tr|E5GB32|E5GB32_CUCME7.8e-6287.41Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S4E592|A0A1S4E592_CUCME6.6e-6186.71zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo OX=... [more]
tr|A0A1S3CNE8|A0A1S3CNE8_CUCME1.1e-5885.71zinc finger BED domain-containing protein RICESLEEPER 4-like OS=Cucumis melo OX=... [more]
tr|A0A1S4DU07|A0A1S4DU07_CUCME1.5e-5782.86zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Cucum... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR008906HATC_C_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008987.2.1MELO3C008987.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 61..139
e-value: 1.5E-22
score: 79.0
NoneNo IPR availablePANTHERPTHR23272:SF54SUBFAMILY NOT NAMEDcoord: 24..140
NoneNo IPR availablePANTHERPTHR23272BED FINGER-RELATEDcoord: 24..140
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 50..139

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008987.2Wax gourdmedwgoB650
MELO3C008987.2Wax gourdmedwgoB670
MELO3C008987.2Cucumber (Gy14) v2cgybmedB285
MELO3C008987.2Cucumber (Gy14) v1cgymedB577
MELO3C008987.2Cucurbita maxima (Rimu)cmamedB698
MELO3C008987.2Cucurbita maxima (Rimu)cmamedB909
MELO3C008987.2Cucurbita moschata (Rifu)cmomedB689
MELO3C008987.2Cucurbita moschata (Rifu)cmomedB897
MELO3C008987.2Cucurbita pepo (Zucchini)cpemedB095
MELO3C008987.2Cucurbita pepo (Zucchini)cpemedB533
MELO3C008987.2Wild cucumber (PI 183967)cpimedB324
MELO3C008987.2Cucumber (Chinese Long) v2cumedB321
MELO3C008987.2Bottle gourd (USVL1VR-Ls)lsimedB159
MELO3C008987.2Watermelon (Charleston Gray)medwcgB522
MELO3C008987.2Watermelon (97103) v1medwmB565
MELO3C008987.2Silver-seed gourdcarmedB0298
MELO3C008987.2Silver-seed gourdcarmedB0858
MELO3C008987.2Cucumber (Chinese Long) v3cucmedB329
MELO3C008987.2Watermelon (97103) v2medwmbB526