MELO3C008868.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C008868.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionsubtilisin-like protease SBT3.17 isoform X1
Locationchr08 : 25147571 .. 25147897 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGATAGGAACGAGGAGTTGCCATCCATGTACAGTCAGGGGATTTACATGTCTCAGAATAATGTATGCACATCACGACCTGCTCACACATCAAACGGTAGAGCTGAATCGAGCGAATCAAAGAGAAATAAGGGAAGCCAATGGGAGGGTGAGCTTGACGTCATACATATGGCCTTGGAGTGTACCAATGACCAACTCAGGACGATTTCTGAGTGGTCTGCACACACGCTTGCTAATGACACCCATGTTCGCCAAGAATTTTTACACCTATTGCATGAGATGCCCGACCTAAGAAGTTTGGATAGGATGTTGTGCCAAAGGTAG

mRNA sequence

ATGTCGGATAGGAACGAGGAGTTGCCATCCATGTACAGTCAGGGGATTTACATGTCTCAGAATAATGTATGCACATCACGACCTGCTCACACATCAAACGGTAGAGCTGAATCGAGCGAATCAAAGAGAAATAAGGGAAGCCAATGGGAGGGTGAGCTTGACGTCATACATATGGCCTTGGAGTGTACCAATGACCAACTCAGGACGATTTCTGAGTGGTCTGCACACACGCTTGCTAATGACACCCATGTTCGCCAAGAATTTTTACACCTATTGCATGAGATGCCCGACCTAAGAAGTTTGGATAGGATGTTGTGCCAAAGGTAG

Coding sequence (CDS)

ATGTCGGATAGGAACGAGGAGTTGCCATCCATGTACAGTCAGGGGATTTACATGTCTCAGAATAATGTATGCACATCACGACCTGCTCACACATCAAACGGTAGAGCTGAATCGAGCGAATCAAAGAGAAATAAGGGAAGCCAATGGGAGGGTGAGCTTGACGTCATACATATGGCCTTGGAGTGTACCAATGACCAACTCAGGACGATTTCTGAGTGGTCTGCACACACGCTTGCTAATGACACCCATGTTCGCCAAGAATTTTTACACCTATTGCATGAGATGCCCGACCTAAGAAGTTTGGATAGGATGTTGTGCCAAAGGTAG

Protein sequence

MSDRNEELPSMYSQGIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMALECTNDQLRTISEWSAHTLANDTHVRQEFLHLLHEMPDLRSLDRMLCQR
Homology
[Close]
BLAST of MELO3C008868.2 vs. NCBI nr
Match: XP_016900897.1 (PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo] >XP_016900898.1 PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo])

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-18
Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 0 

Query: 1   MSDRNE-ELPSMYSQGIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMA 60
           MSD N+ E P MYSQ I MSQ++V  SRP   S+ R  SS SK+ + SQWEGE+++IHMA
Sbjct: 46  MSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKQKRESQWEGEIEMIHMA 105

Query: 61  LECTNDQLRTISEWSAHTLANDTHV 85
           LEC NDQLRTI EWSA  LANDT V
Sbjct: 106 LECANDQLRTIVEWSARALANDTTV 130

[Close]
BLAST of MELO3C008868.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 99.4 bits (246), Expect = 8.1e-18
Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = 0 

Query: 1   MSDRNEELPSMYSQGIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMAL 60
           M D NE+ P +YS+G+ + Q++V  SRP+             R +GSQ + +++ IH+AL
Sbjct: 483 MGDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLAL 542

Query: 61  ECTNDQLRTISEWSAHTLANDTHVRQEFLHLLHEMPDLRSLDRMLCQR 109
           + TN+QLR I+EW A  LAND HVR EF  +L EMP+L SLDR L QR
Sbjct: 543 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQR 590

[Close]
BLAST of MELO3C008868.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 67.4 bits (163), Expect = 3.4e-08
Identity = 36/99 (36.36%), Postives = 59/99 (59.60%), Query Frame = 0 

Query: 5   NEELPSMYSQGIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMALECTN 64
           +E++P+MYSQG++MS + +   R    S  R  SS SKR +GS+    ++VI   +E  N
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGN 230

Query: 65  DQLRTISEWSAHTLANDTHVRQEFLHLLHEMPDLRSLDR 104
           +QL+ I++W     A +  +R + +  L ++P LRS DR
Sbjct: 231 EQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDR 269

[Close]
BLAST of MELO3C008868.2 vs. NCBI nr
Match: ADN33753.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 67.0 bits (162), Expect = 4.4e-08
Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 0 

Query: 5   NEELPSMYSQGIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMALECTN 64
           ++++P+MYSQG++M  N +   R    S  R  SS SKR +GS+    ++VI  A+E  N
Sbjct: 13  DQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGN 72

Query: 65  DQLRTISEWSAHTLANDTHVRQEFLHLLHEMPDLRSLDR 104
           DQL+   +WS    + +  +  E +  L ++P+LRS DR
Sbjct: 73  DQLKAFEDWSKDKHSTEVELHAEVVKQLQDIPELRSRDR 111

[Close]
BLAST of MELO3C008868.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05
Identity = 35/102 (34.31%), Postives = 52/102 (50.98%), Query Frame = 0 

Query: 7   ELPSMYSQGIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMALECTNDQ 66
           + P MYS G+ MS +++  +R A  S  R  SS SKR +        D++  A+E  N+Q
Sbjct: 524 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQ 583

Query: 67  LRTISEWSAHTLANDTHVRQEFLHLLHEMPDLRSLDRMLCQR 109
           L  I+EW      + T  RQE +  L  +P+L  +DR    R
Sbjct: 584 LHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMR 625

[Close]
BLAST of MELO3C008868.2 vs. TrEMBL
Match: tr|A0A1S4DY48|A0A1S4DY48_CUCME (uncharacterized protein LOC103491960 OS=Cucumis melo OX=3656 GN=LOC103491960 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-18
Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 0 

Query: 1   MSDRNE-ELPSMYSQGIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMA 60
           MSD N+ E P MYSQ I MSQ++V  SRP   S+ R  SS SK+ + SQWEGE+++IHMA
Sbjct: 46  MSDENDMEFPFMYSQRIVMSQDDVRASRPYSVSDSRTGSSGSKQKRESQWEGEIEMIHMA 105

Query: 61  LECTNDQLRTISEWSAHTLANDTHV 85
           LEC NDQLRTI EWSA  LANDT V
Sbjct: 106 LECANDQLRTIVEWSARALANDTTV 130

[Close]
BLAST of MELO3C008868.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.4e-18
Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = 0 

Query: 1   MSDRNEELPSMYSQGIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMAL 60
           M D NE+ P +YS+G+ + Q++V  SRP+             R +GSQ + +++ IH+AL
Sbjct: 483 MGDGNEDFPPVYSRGVDILQDDVRASRPSXXXXXXXXXXXXXRKRGSQRDFDVEAIHLAL 542

Query: 61  ECTNDQLRTISEWSAHTLANDTHVRQEFLHLLHEMPDLRSLDRMLCQR 109
           + TN+QLR I+EW A  LAND HVR EF  +L EMP+L SLDR L QR
Sbjct: 543 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQR 590

[Close]
BLAST of MELO3C008868.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-08
Identity = 36/99 (36.36%), Postives = 59/99 (59.60%), Query Frame = 0 

Query: 5   NEELPSMYSQGIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMALECTN 64
           +E++P+MYSQG++MS + +   R    S  R  SS SKR +GS+    ++VI   +E  N
Sbjct: 171 DEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGN 230

Query: 65  DQLRTISEWSAHTLANDTHVRQEFLHLLHEMPDLRSLDR 104
           +QL+ I++W     A +  +R + +  L ++P LRS DR
Sbjct: 231 EQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDR 269

[Close]
BLAST of MELO3C008868.2 vs. TrEMBL
Match: tr|E5GBB1|E5GBB1_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-08
Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 0 

Query: 5   NEELPSMYSQGIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMALECTN 64
           ++++P+MYSQG++M  N +   R    S  R  SS SKR +GS+    ++VI  A+E  N
Sbjct: 13  DQDIPTMYSQGVHMLSNEMFGIRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGN 72

Query: 65  DQLRTISEWSAHTLANDTHVRQEFLHLLHEMPDLRSLDR 104
           DQL+   +WS    + +  +  E +  L ++P+LRS DR
Sbjct: 73  DQLKAFEDWSKDKHSTEVELHAEVVKQLQDIPELRSRDR 111

[Close]
BLAST of MELO3C008868.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.0e-06
Identity = 35/102 (34.31%), Postives = 52/102 (50.98%), Query Frame = 0 

Query: 7   ELPSMYSQGIYMSQNNVCTSRPAHTSNGRAESSESKRNKGSQWEGELDVIHMALECTNDQ 66
           + P MYS G+ MS +++  +R A  S  R  SS SKR +        D++  A+E  N+Q
Sbjct: 524 DFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQ 583

Query: 67  LRTISEWSAHTLANDTHVRQEFLHLLHEMPDLRSLDRMLCQR 109
           L  I+EW      + T  RQE +  L  +P+L  +DR    R
Sbjct: 584 LHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMR 625

The following BLAST results are available for this feature:
BLAST of MELO3C008868.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016900897.11.6e-1863.53PREDICTED: uncharacterized protein LOC103491960 [Cucumis melo] >XP_016900898.1 P... [more]
ADN33754.18.1e-1847.22retrotransposon protein [Cucumis melo subsp. melo][more]
XP_008441954.13.4e-0836.36PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo][more]
ADN33753.14.4e-0836.36hypothetical protein [Cucumis melo subsp. melo][more]
ADN34114.11.2e-0534.31retrotransposon protein [Cucumis melo subsp. melo][more]
BLAST of MELO3C008868.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C008868.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C008868.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DY48|A0A1S4DY48_CUCME1.1e-1863.53uncharacterized protein LOC103491960 OS=Cucumis melo OX=3656 GN=LOC103491960 PE=... [more]
tr|E5GBB2|E5GBB2_CUCME5.4e-1847.22Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3B4L3|A0A1S3B4L3_CUCME2.3e-0836.36uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
tr|E5GBB1|E5GBB1_CUCME2.9e-0836.36Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|E5GCB5|E5GCB5_CUCME8.0e-0634.31Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008233 peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008868.2.1MELO3C008868.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..49

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008868.2Cucumber (Gy14) v2cgybmedB287
MELO3C008868.2Cucumber (Gy14) v1cgymedB070
MELO3C008868.2Cucurbita maxima (Rimu)cmamedB693
MELO3C008868.2Cucurbita maxima (Rimu)cmamedB899
MELO3C008868.2Cucurbita moschata (Rifu)cmomedB685
MELO3C008868.2Cucurbita moschata (Rifu)cmomedB888
MELO3C008868.2Cucurbita pepo (Zucchini)cpemedB089
MELO3C008868.2Cucurbita pepo (Zucchini)cpemedB542
MELO3C008868.2Wild cucumber (PI 183967)cpimedB326
MELO3C008868.2Cucumber (Chinese Long) v2cumedB322
MELO3C008868.2Bottle gourd (USVL1VR-Ls)lsimedB164
MELO3C008868.2Watermelon (Charleston Gray)medwcgB532
MELO3C008868.2Watermelon (97103) v1medwmB575
MELO3C008868.2Silver-seed gourdcarmedB0593
MELO3C008868.2Silver-seed gourdcarmedB1010
MELO3C008868.2Cucumber (Chinese Long) v3cucmedB333
MELO3C008868.2Watermelon (97103) v2medwmbB538
MELO3C008868.2Wax gourdmedwgoB666