MELO3C008831 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008831
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionATP-dependent DNA helicase Q-like 2
Locationchr8 : 24124060 .. 24125540 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATAGTTTTCACTTTTCAGCTACGAAAGTTGCTGGGGAATTGATTTCTAGCTCTTTGTTTAGGTAAGTTCTTAGCACTGATCTGAGAATACATATTGTTGGTTTTATGTTTCTTTATGTTCAGCGTGGAGTCTGCTTCTCTCCAATTTAGTACTTCTCTTAATTGTTATATAAACTATTGGGTTCTGGTCTCAGGGTAGAATACAAACAGCTGGACAAACTTCGTGATGTTCTACCAGGTCTTCCATTTGTTGCCCTGACTGCCACTGCAACTGAAAAGTAGGTAGCTAAATTTCTTCCAATTACACCTGTTACTTTTTCTCTTTTCAGTGCTAGTGTTTTTTGTTTTTATTGTTGAACTGAAAACATCCATTAGCAGAGCTACCGCATACTGCATCACAATGGTTTGTGTTATTGAACTCCGTTGCTCTATCTGTGGTGAATTGTTAGCTTGAAGGCTGATCTTGCTATTATTTATTTGGATAGATTTTGTTAAATCTCACATAAAAGCTTCTTTCTTTTCGTTGAAAATTTACTCCTTTTTTTTGGCCAGGGGATTCAAACCTCTAATTTTTGATTGAGGATATATGCCTTAACTAGTTGAGTGAGCTTGTATTTATTGAAATTTTACTTGTATGATGGAGAAATGTGGAACTCTTGTATGTCACATGTTTTCTAGTTAATAGCCCCATGGCTTTATTAGGATTCTATTTATAGCCCATAGTAAAGAGATTATGTACAGTTCCATTTAATAATTTGGTGCAGAATTGGGATATTTTGCGTTGATTTTTTTAACTTTAATGTTTATGCTCTTAAATTTATTTCCTCGGATTTTTTTAATTTTCAATACATTTTCTTGGGGACTGAATTCTTTGGGTATTTATTTCACATTTTGTTTCAGGGTCCGGAGTGACATTATTAATTCTTTGAAGATGAAAGACCCACAAGTTACCATTGGTTCATTTGATCGAACAAATCTTTTTTATGGAGTCAAGTCTTTTAATCGTGGTCCATTATTCATGAACGAGCTGGTGCTTGATATCTCTAAGTACGTAGCCTCTGGTGGTTCGACTATCATTTACTGCACGACAATTAAAGATGTTGAGCAGGTATATTCTTTTGCTTCTAGTTCTTACAAACGCTGCTTTCAAGTTCACTGCACTTTAAGAAGCATAGATAATTAAATATTTGCATACTTACCTAGCACAATAAATTCAGGGCATGGAGCAACTGGATTATTTCATTATTGTTAATTACACTTGAGATTATATATGCCTTCATGGTGGGCTGTCGCAACAATTTGTGCAAGAAGCACTTTCAGGTTTATGTTGAGCTTATTAATTGGCTTTTCGTGAATTTCGGTCCAAATTGTTTTTGTAGATATTCAAGGCACTTGAAGAAGCAGGGATTAGTGTTGGAATCTATCACGGTCAAATGGACAAAAAATCACGTGCAGAATCCCACAGGTTATACCACTAG

mRNA sequence

ATGTATAGTTTTCACTTTTCAGCTACGAAAGTTGCTGGGGAATTGATTTCTAGCTCTTTGTTTAGGGTAGAATACAAACAGCTGGACAAACTTCGTGATGTTCTACCAGGTCTTCCATTTGTTGCCCTGACTGCCACTGCAACTGAAAAGGTCCGGAGTGACATTATTAATTCTTTGAAGATGAAAGACCCACAAGTTACCATTGGTTCATTTGATCGAACAAATCTTTTTTATGGAGTCAAGTCTTTTAATCGTGGTCCATTATTCATGAACGAGCTGGTGCTTGATATCTCTAAGTACGTAGCCTCTGGTGGTTCGACTATCATTTACTGCACGACAATTAAAGATGTTGAGCAGATATTCAAGGCACTTGAAGAAGCAGGGATTAGTGTTGGAATCTATCACGGTCAAATGGACAAAAAATCACGTGCAGAATCCCACAGGTTATACCACTAG

Coding sequence (CDS)

ATGTATAGTTTTCACTTTTCAGCTACGAAAGTTGCTGGGGAATTGATTTCTAGCTCTTTGTTTAGGGTAGAATACAAACAGCTGGACAAACTTCGTGATGTTCTACCAGGTCTTCCATTTGTTGCCCTGACTGCCACTGCAACTGAAAAGGTCCGGAGTGACATTATTAATTCTTTGAAGATGAAAGACCCACAAGTTACCATTGGTTCATTTGATCGAACAAATCTTTTTTATGGAGTCAAGTCTTTTAATCGTGGTCCATTATTCATGAACGAGCTGGTGCTTGATATCTCTAAGTACGTAGCCTCTGGTGGTTCGACTATCATTTACTGCACGACAATTAAAGATGTTGAGCAGATATTCAAGGCACTTGAAGAAGCAGGGATTAGTGTTGGAATCTATCACGGTCAAATGGACAAAAAATCACGTGCAGAATCCCACAGGTTATACCACTAG

Protein sequence

MYSFHFSATKVAGELISSSLFRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDKKSRAESHRLYH*
Homology
[Close]
BLAST of MELO3C008831 vs. Swiss-Prot
Match: WRN_XENLA (Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis GN=wrn PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.9e-18
Identity = 57/136 (41.91%), Postives = 74/136 (54.41%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FR  Y+ L  L+ +LP +P VALTATA+  +R DI  SL + +PQVT  SFDR NL+  V
Sbjct: 621 FRSAYRSLGSLKRMLPNVPIVALTATASPSIREDITKSLNLHNPQVTCTSFDRPNLYLDV 680

Query: 81  --KSFNRGPLFMNELVLDISKYVASG----GSTIIYCTTIKDVEQIFKALEEAGISVGIY 140
             K+ N   + ++     I K   SG    G+TI+YC T K  EQ+   L + GI+ G Y
Sbjct: 681 ARKTTN---ISIDLRQFLIKKQQGSGWEFEGATIVYCPTRKTSEQVTAELIKLGIACGTY 740

Query: 141 HGQMDKKSRAESHRLY 151
           H  M  K R E H  +
Sbjct: 741 HAGMGIKQRREVHHRF 753

[Close]
BLAST of MELO3C008831 vs. Swiss-Prot
Match: MED34_ARATH (Mediator of RNA polymerase II transcription subunit 34 OS=Arabidopsis thaliana GN=MED34 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.0e-17
Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FR +YK L  L+   P +P VALTATAT+KV++D+I  L +      + S +R NLFY V
Sbjct: 229 FRPDYKNLSILKTQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSV 288

Query: 81  KSFNR-GPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMD 140
           +  +  G L ++E+   I +  ++  S I+YC + K+ EQI   L E GIS   YH  MD
Sbjct: 289 REKSAVGKLVVDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMD 348

Query: 141 KKSRAESH 148
              R + H
Sbjct: 349 ANMREKVH 356

[Close]
BLAST of MELO3C008831 vs. Swiss-Prot
Match: WRN_HUMAN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-15
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FR  +++L  L+  LP +P VALTATA+  +R DI+  L +++PQ+T   FDR NL+  V
Sbjct: 680 FRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLRNPQITCTGFDRPNLYLEV 739

Query: 81  KSFNRGPL-FMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMD 140
           +      L  +   ++  S +    G TIIYC + K  +Q+   L +  +S G YH  M 
Sbjct: 740 RRKTGNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVTGELRKLNLSCGTYHAGMS 799

Query: 141 KKSRAESHRLY 151
             +R + H  +
Sbjct: 800 FSTRKDIHHRF 810

[Close]
BLAST of MELO3C008831 vs. Swiss-Prot
Match: SGS1_YEAST (ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGS1 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.7e-15
Identity = 46/123 (37.40%), Postives = 66/123 (53.66%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FR +YK+L   +   P +P +ALTATA+E+VR DII++L++K+P     SF+RTNL+Y V
Sbjct: 820 FRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEV 879

Query: 81  KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK 140
               +  +F    + D  K      + IIYC + K  EQ    ++  GI    YH  M+ 
Sbjct: 880 NKKTKNTIFE---ICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEP 939

Query: 141 KSR 144
             R
Sbjct: 940 DER 939

[Close]
BLAST of MELO3C008831 vs. Swiss-Prot
Match: YR290_MIMIV (Putative ATP-dependent RNA helicase R290 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R290 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.1e-15
Identity = 45/127 (35.43%), Postives = 71/127 (55.91%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FR  Y+++   +++LP +P +ALTATAT  V  DI   L++K  +    SFDR NL+  V
Sbjct: 162 FRTAYREITFFKEILPNVPILALTATATNIVAKDICKVLQLKTNEPIKASFDRPNLYLEV 221

Query: 81  KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK 140
           ++ ++ P   N++V  I+KY     S IIYC T K+ ++I   L    +  GIYH  +  
Sbjct: 222 RTKSKNP--ANDIVPIINKY--PNQSVIIYCLTKKETQKIADILTVHKVVCGIYHAGLSN 281

Query: 141 KSRAESH 148
           + + ++H
Sbjct: 282 EHKTKTH 284

[Close]
BLAST of MELO3C008831 vs. TrEMBL
Match: A0A0A0L1A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188732 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 8.4e-64
Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FRVEYKQLDKLRDVLP LPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV
Sbjct: 75  FRVEYKQLDKLRDVLPDLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 134

Query: 81  KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK 140
           KSFNRGPLFMNE VLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGIS GIYHGQMDK
Sbjct: 135 KSFNRGPLFMNEFVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISAGIYHGQMDK 194

Query: 141 KSRAESHRLY 151
           KSRAESHRL+
Sbjct: 195 KSRAESHRLF 204

[Close]
BLAST of MELO3C008831 vs. TrEMBL
Match: A0A0A0KWB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188670 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.0e-61
Identity = 122/130 (93.85%), Postives = 126/130 (96.92%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FRVEYKQLDKLRDVLPGLPFVALTATATEKVR+DIINSLKMKDPQVTIGSFDRTNLFYGV
Sbjct: 145 FRVEYKQLDKLRDVLPGLPFVALTATATEKVRNDIINSLKMKDPQVTIGSFDRTNLFYGV 204

Query: 81  KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK 140
           KSF+RGPLFMN+LVLDISKYVASGGSTIIYCTTIKDVEQI KALEEAGIS GIYHG MDK
Sbjct: 205 KSFDRGPLFMNKLVLDISKYVASGGSTIIYCTTIKDVEQISKALEEAGISAGIYHGLMDK 264

Query: 141 KSRAESHRLY 151
            SRAESHRL+
Sbjct: 265 TSRAESHRLF 274

[Close]
BLAST of MELO3C008831 vs. TrEMBL
Match: M5W6N4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001081mg PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.5e-49
Identity = 97/130 (74.62%), Postives = 115/130 (88.46%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FRVEYK+LDKLR +L  +PF+ALTATATEKVR+DI+NSLKM++P VTIGSFDR NLFYGV
Sbjct: 148 FRVEYKKLDKLRGILVDVPFIALTATATEKVRTDIVNSLKMQNPYVTIGSFDRPNLFYGV 207

Query: 81  KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK 140
           KSFNRG  F++ELV ++SK+V   GSTIIYCTTIKDVEQ+FK+L+E GI VG YHGQMD 
Sbjct: 208 KSFNRGQSFVHELVQEVSKFVRRDGSTIIYCTTIKDVEQVFKSLKELGIKVGTYHGQMDS 267

Query: 141 KSRAESHRLY 151
           K+RAESHRL+
Sbjct: 268 KARAESHRLF 277

[Close]
BLAST of MELO3C008831 vs. TrEMBL
Match: A0A0L9VCG5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g141500 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-46
Identity = 97/130 (74.62%), Postives = 111/130 (85.38%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FRVEYK LDKLR+VL  +PFV LTATATEKVR DII+SLKM +P VTIGSFDRTNLFYGV
Sbjct: 148 FRVEYKHLDKLREVLLDVPFVGLTATATEKVRFDIISSLKMDNPYVTIGSFDRTNLFYGV 207

Query: 81  KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK 140
           K  NRG  F++ELV +ISK VA+GGSTIIYCTTIKDVEQ+FK+  EAGI  G+YHGQM+ 
Sbjct: 208 KLLNRGQSFIDELVREISKEVATGGSTIIYCTTIKDVEQVFKSFTEAGIEAGMYHGQMNG 267

Query: 141 KSRAESHRLY 151
           K+R ESHRL+
Sbjct: 268 KAREESHRLF 277

[Close]
BLAST of MELO3C008831 vs. TrEMBL
Match: V7BQR9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G082600g PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-46
Identity = 98/130 (75.38%), Postives = 110/130 (84.62%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FRVEYK LDKLR+VL  +PFV LTATATEKVR DII+SLKM +P VTIGSFDRTNLFYGV
Sbjct: 158 FRVEYKHLDKLREVLLDVPFVGLTATATEKVRFDIISSLKMDNPYVTIGSFDRTNLFYGV 217

Query: 81  KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK 140
           K  NRG  F++ELV +ISK VA+GGSTIIYCTTIKDVEQIFK+  EAGI  G+YHGQM+ 
Sbjct: 218 KLLNRGQSFIDELVREISKEVATGGSTIIYCTTIKDVEQIFKSFTEAGIEAGMYHGQMNG 277

Query: 141 KSRAESHRLY 151
           K R ESHRL+
Sbjct: 278 KDREESHRLF 287

[Close]
BLAST of MELO3C008831 vs. TAIR10
Match: AT1G31360.1 (AT1G31360.1 RECQ helicase L2)

HSP 1 Score: 89.0 bits (219), Expect = 2.8e-18
Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FR +YK L  L+   P +P VALTATAT+KV++D+I  L +      + S +R NLFY V
Sbjct: 229 FRPDYKNLSILKTQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSV 288

Query: 81  KSFNR-GPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMD 140
           +  +  G L ++E+   I +  ++  S I+YC + K+ EQI   L E GIS   YH  MD
Sbjct: 289 REKSAVGKLVVDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMD 348

Query: 141 KKSRAESH 148
              R + H
Sbjct: 349 ANMREKVH 356

[Close]
BLAST of MELO3C008831 vs. TAIR10
Match: AT4G35740.1 (AT4G35740.1 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 79.0 bits (193), Expect = 2.9e-15
Identity = 46/126 (36.51%), Postives = 67/126 (53.17%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FR  Y+QL  LRD L  +P +ALTATA  KV+ D+I+SL +++P V   SF+R N+FY V
Sbjct: 175 FRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLRNPLVLKSSFNRPNIFYEV 234

Query: 81  KSFNRGPLFMNELVLDISKYVASGGS--TIIYCTTIKDVEQIFKALEEAGISVGIYHGQM 140
           +  +     ++    D+   + S G+   IIYC      + +   L   GIS   YH  +
Sbjct: 235 RYKD----LLDNAYTDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIGISSAAYHAGL 294

Query: 141 DKKSRA 145
           + K R+
Sbjct: 295 NSKMRS 296

[Close]
BLAST of MELO3C008831 vs. TAIR10
Match: AT1G60930.1 (AT1G60930.1 RECQ helicase L4B)

HSP 1 Score: 73.9 bits (180), Expect = 9.3e-14
Identity = 45/127 (35.43%), Postives = 64/127 (50.39%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FR +Y+ L  L+   P +P +ALTATAT  V+ D++ +L + +  V   SF+R NL+Y V
Sbjct: 609 FRPDYQGLGVLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSV 668

Query: 81  KSFNRGPLFMNELVLDISKYVASG---GSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQ 140
                     N+ + DI K++         IIYC +  D E++ +AL   G     YHG 
Sbjct: 669 VPKT------NKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGS 728

Query: 141 MDKKSRA 145
           MD   RA
Sbjct: 729 MDPGKRA 729

[Close]
BLAST of MELO3C008831 vs. TAIR10
Match: AT1G10930.1 (AT1G10930.1 DNA helicase (RECQl4A))

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FR +Y+ L  L+   P +P +ALTATAT  V+ D++ +L + +  V   SF+R NL+Y V
Sbjct: 593 FRPDYQSLGILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSV 652

Query: 81  KSFNRGPLFMNELVLDISKYVASG---GSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQ 140
               +      + + DI K++         IIYC +  D E++ + L+E G     YHG 
Sbjct: 653 VPKTK------KCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGS 712

Query: 141 MDKKSRA 145
           M+ + RA
Sbjct: 713 MEPEQRA 713

[Close]
BLAST of MELO3C008831 vs. TAIR10
Match: AT3G05740.1 (AT3G05740.1 RECQ helicase l1)

HSP 1 Score: 65.5 bits (158), Expect = 3.3e-11
Identity = 46/130 (35.38%), Postives = 65/130 (50.00%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FR +Y++L  L+   P +P +ALTATATE V  D++ SL++    V   SFDR NL Y V
Sbjct: 347 FRPDYRELGCLKQNFPRVPVMALTATATESVCQDVLKSLRIPRAPVLKMSFDRINLKYEV 406

Query: 81  KSFNRGPL-FMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKAL-EEAGISVGIYHGQM 140
               + PL  + EL+ D  K      S I+YC +  +   + K L E+  +    YH  +
Sbjct: 407 IVKTKEPLKQLQELLRDRFK----DQSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHAGV 466

Query: 141 DKKSRAESHR 149
             K R +  R
Sbjct: 467 PAKQRVDVQR 472

[Close]
BLAST of MELO3C008831 vs. NCBI nr
Match: gi|659082756|ref|XP_008442016.1| (PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X2 [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 1.2e-76
Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 1 

Query: 1   MYSFHFSATKVAGELISSSLFRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLK 60
           MYSFHFSATKVAGELISSSLFRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLK
Sbjct: 1   MYSFHFSATKVAGELISSSLFRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLK 60

Query: 61  MKDPQVTIGSFDRTNLFYGVKSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQI 120
           MKDPQVTIGSFDRTNLFYGVKSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQI
Sbjct: 61  MKDPQVTIGSFDRTNLFYGVKSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQI 120

Query: 121 FKALEEAGISVGIYHGQMDKKSRAESHRLY 151
           FKALEEAGISVGIYHGQMDKKSRAESHRL+
Sbjct: 121 FKALEEAGISVGIYHGQMDKKSRAESHRLF 150

[Close]
BLAST of MELO3C008831 vs. NCBI nr
Match: gi|659082754|ref|XP_008442015.1| (PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X1 [Cucumis melo])

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-65
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV
Sbjct: 145 FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 204

Query: 81  KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK 140
           KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK
Sbjct: 205 KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK 264

Query: 141 KSRAESHRLY 151
           KSRAESHRL+
Sbjct: 265 KSRAESHRLF 274

[Close]
BLAST of MELO3C008831 vs. NCBI nr
Match: gi|778692430|ref|XP_011653463.1| (PREDICTED: ATP-dependent DNA helicase Q-like SIM [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 1.2e-63
Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FRVEYKQLDKLRDVLP LPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV
Sbjct: 145 FRVEYKQLDKLRDVLPDLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 204

Query: 81  KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK 140
           KSFNRGPLFMNE VLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGIS GIYHGQMDK
Sbjct: 205 KSFNRGPLFMNEFVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISAGIYHGQMDK 264

Query: 141 KSRAESHRLY 151
           KSRAESHRL+
Sbjct: 265 KSRAESHRLF 274

[Close]
BLAST of MELO3C008831 vs. NCBI nr
Match: gi|700198758|gb|KGN53916.1| (hypothetical protein Csa_4G188732 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 1.2e-63
Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FRVEYKQLDKLRDVLP LPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV
Sbjct: 75  FRVEYKQLDKLRDVLPDLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 134

Query: 81  KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK 140
           KSFNRGPLFMNE VLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGIS GIYHGQMDK
Sbjct: 135 KSFNRGPLFMNEFVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISAGIYHGQMDK 194

Query: 141 KSRAESHRLY 151
           KSRAESHRL+
Sbjct: 195 KSRAESHRLF 204

[Close]
BLAST of MELO3C008831 vs. NCBI nr
Match: gi|659082746|ref|XP_008442011.1| (PREDICTED: Werner syndrome ATP-dependent helicase-like isoform X1 [Cucumis melo])

HSP 1 Score: 243.8 bits (621), Expect = 1.9e-61
Identity = 122/130 (93.85%), Postives = 127/130 (97.69%), Query Frame = 1 

Query: 21  FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 80
           FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV
Sbjct: 145 FRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGV 204

Query: 81  KSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKDVEQIFKALEEAGISVGIYHGQMDK 140
           +SF+RGPLFMN+LVLDISKYVASGGSTIIYCTTIKDVEQI KALEEAGIS GIYH QMDK
Sbjct: 205 RSFDRGPLFMNKLVLDISKYVASGGSTIIYCTTIKDVEQISKALEEAGISAGIYHAQMDK 264

Query: 141 KSRAESHRLY 151
           +SRAESHRL+
Sbjct: 265 ESRAESHRLF 274

The following BLAST results are available for this feature:
BLAST of MELO3C008831 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRN_XENLA5.9e-1841.91Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis GN=wrn PE=2 SV=... [more]
MED34_ARATH5.0e-1739.84Mediator of RNA polymerase II transcription subunit 34 OS=Arabidopsis thaliana G... [more]
WRN_HUMAN1.2e-1534.35Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2[more]
SGS1_YEAST2.7e-1537.40ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2... [more]
YR290_MIMIV6.1e-1535.43Putative ATP-dependent RNA helicase R290 OS=Acanthamoeba polyphaga mimivirus GN=... [more]
BLAST of MELO3C008831 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1A4_CUCSA8.4e-6496.92Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188732 PE=4 SV=1[more]
A0A0A0KWB6_CUCSA3.0e-6193.85Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188670 PE=4 SV=1[more]
M5W6N4_PRUPE4.5e-4974.62Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001081mg PE=4 SV=1[more]
A0A0L9VCG5_PHAAN1.2e-4674.62Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g141500 PE=4 SV=1[more]
V7BQR9_PHAVU1.2e-4675.38Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G082600g PE=4 SV=1[more]
BLAST of MELO3C008831 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G31360.12.8e-1839.84 RECQ helicase L2[more]
AT4G35740.12.9e-1536.51 DEAD/DEAH box RNA helicase family protein [more]
AT1G60930.19.3e-1435.43 RECQ helicase L4B[more]
AT1G10930.11.2e-1333.86 DNA helicase (RECQl4A)[more]
AT3G05740.13.3e-1135.38 RECQ helicase l1[more]
BLAST of MELO3C008831 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082756|ref|XP_008442016.1|1.2e-7699.33PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X2 [Cucumis me... [more]
gi|659082754|ref|XP_008442015.1|2.2e-6599.23PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X1 [Cucumis me... [more]
gi|778692430|ref|XP_011653463.1|1.2e-6396.92PREDICTED: ATP-dependent DNA helicase Q-like SIM [Cucumis sativus][more]
gi|700198758|gb|KGN53916.1|1.2e-6396.92hypothetical protein Csa_4G188732 [Cucumis sativus][more]
gi|659082746|ref|XP_008442011.1|1.9e-6193.85PREDICTED: Werner syndrome ATP-dependent helicase-like isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032508 DNA duplex unwinding
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
biological_process GO:0006260 DNA replication
cellular_component GO:0005657 replication fork
molecular_function GO:0005524 ATP binding
molecular_function GO:0043140 ATP-dependent 3'-5' DNA helicase activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008831T1MELO3C008831T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 97..146
score: 9.
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 20..67
score: 1.5E-7coord: 91..146
score: 9.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 36..145
score: 3.01
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 21..148
score: 1.8
NoneNo IPR availablePANTHERPTHR13710:SF87WERNER SYNDROME ATP-DEPENDENT HELICASEcoord: 21..148
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008831Wax gourdmewgoB652
MELO3C008831Cucumber (Gy14) v1cgymeB547
MELO3C008831Cucurbita maxima (Rimu)cmameB610
MELO3C008831Cucurbita maxima (Rimu)cmameB801
MELO3C008831Cucurbita moschata (Rifu)cmomeB599
MELO3C008831Cucurbita moschata (Rifu)cmomeB785
MELO3C008831Wild cucumber (PI 183967)cpimeB323
MELO3C008831Cucumber (Chinese Long) v2cumeB324
MELO3C008831Watermelon (Charleston Gray)mewcgB532
MELO3C008831Watermelon (97103) v1mewmB585
MELO3C008831Cucurbita pepo (Zucchini)cpemeB070
MELO3C008831Cucurbita pepo (Zucchini)cpemeB459
MELO3C008831Bottle gourd (USVL1VR-Ls)lsimeB157
MELO3C008831Cucumber (Gy14) v2cgybmeB280
MELO3C008831Silver-seed gourdcarmeB0586
MELO3C008831Silver-seed gourdcarmeB0627
MELO3C008831Cucumber (Chinese Long) v3cucmeB328
MELO3C008831Watermelon (97103) v2mewmbB540