MELO3C008763 (gene) Melon (DHL92) v3.5.1

NameMELO3C008763
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionGlutamine--tRNA ligase
Locationchr5 : 18754215 .. 18754523 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTGAAGGAGAAGAAGAAAGGGATCAAGGACCCACTTATTCACAAGAGGAAAGGTGAGGAAGAGGCCTCTAGGTCAAGGAAAAGAGAAAAGAAACCCAAGGCAAAGGACTCTAGGGACCCTATCCATCTTGTGATAATCAACCGGCCTACTGACCAAACCACCACCACCTCGCCCACGCCTTCCAAAACGCCACCTCCTTCAATAATCCAAATTCCTTCTCCCCAAAAATCCAAAATGCCAAGACCTTTTGGCCAAATCCAAAAAACCACTTGTCACACCCCATCCCAAACACCTCCTCTTTAG

mRNA sequence

ATGAGATTGAAGGAGAAGAAGAAAGGGATCAAGGACCCACTTATTCACAAGAGGAAAGGTGAGGAAGAGGCCTCTAGGTCAAGGAAAAGAGAAAAGAAACCCAAGGCAAAGGACTCTAGGGACCCTATCCATCTTGTGATAATCAACCGGCCTACTGACCAAACCACCACCACCTCGCCCACGCCTTCCAAAACGCCACCTCCTTCAATAATCCAAATTCCTTCTCCCCAAAAATCCAAAATGCCAAGACCTTTTGGCCAAATCCAAAAAACCACTTGTCACACCCCATCCCAAACACCTCCTCTTTAG

Coding sequence (CDS)

ATGAGATTGAAGGAGAAGAAGAAAGGGATCAAGGACCCACTTATTCACAAGAGGAAAGGTGAGGAAGAGGCCTCTAGGTCAAGGAAAAGAGAAAAGAAACCCAAGGCAAAGGACTCTAGGGACCCTATCCATCTTGTGATAATCAACCGGCCTACTGACCAAACCACCACCACCTCGCCCACGCCTTCCAAAACGCCACCTCCTTCAATAATCCAAATTCCTTCTCCCCAAAAATCCAAAATGCCAAGACCTTTTGGCCAAATCCAAAAAACCACTTGTCACACCCCATCCCAAACACCTCCTCTTTAG

Protein sequence

MRLKEKKKGIKDPLIHKRKGEEEASRSRKREKKPKAKDSRDPIHLVIINRPTDQTTTTSPTPSKTPPPSIIQIPSPQKSKMPRPFGQIQKTTCHTPSQTPPL*
BLAST of MELO3C008763 vs. TrEMBL
Match: A0A0A0LY93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G676915 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.8e-13
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 1

Query: 4  KEKKKGIKDPLIHKRKGEEEASRSRKREKKPKAKDSRDPIHLVIINRPTDQTTTTSPTPS 63
          +E +  ++ PLI KRKG EE SRSRK++KK KAKDSR+PI LVIIN PT QTTTTSP PS
Sbjct: 34 EEMEDEMQSPLICKRKGMEEVSRSRKKKKKSKAKDSRNPIPLVIINPPTVQTTTTSPFPS 93

Query: 64 K 65
          K
Sbjct: 94 K 94

BLAST of MELO3C008763 vs. TrEMBL
Match: A0A0A0KTK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G406560 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.2e-09
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 1

Query: 4   KEKKKGIKDPLIHKRKGEEEASRSRKREKKPKAKDSRDPIHLVIINRPTDQTTTTSPTPS 63
           +E++K  + PL+HKRKG++E S S+K+EKKP+AK+S+DP  L I      QTT T+ + S
Sbjct: 41  EEREKEKQTPLVHKRKGKDEGSGSKKQEKKPRAKESKDPFPLAIFTPHVAQTTKTTYSLS 100

Query: 64  KTP--PPSIIQIPSPQKSKMPR 84
           K+P   P+   +PS +    P+
Sbjct: 101 KSPTRTPTKTTLPSQEHQCPPK 122

BLAST of MELO3C008763 vs. TrEMBL
Match: A0A0A0L7I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G284530 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.1e-06
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1

Query: 4   KEKKKGIKDPLIHKRKGEEEASRSRKREKKPKAKDSRDPIHLVIINRPTDQTT--TTSPT 63
           K+KKK  K  L  + K +      RK EKKP+ K+S+DP+ LV+I  PT QTT  T  P+
Sbjct: 48  KKKKKKKKSHLSTRGKAKARRPGQRKEEKKPRDKESKDPLPLVVITLPTAQTTKATILPS 107

Query: 64  PSKTP 67
           PSKTP
Sbjct: 108 PSKTP 112

BLAST of MELO3C008763 vs. NCBI nr
Match: gi|700211657|gb|KGN66753.1| (hypothetical protein Csa_1G676915 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-12
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 1

Query: 4  KEKKKGIKDPLIHKRKGEEEASRSRKREKKPKAKDSRDPIHLVIINRPTDQTTTTSPTPS 63
          +E +  ++ PLI KRKG EE SRSRK++KK KAKDSR+PI LVIIN PT QTTTTSP PS
Sbjct: 34 EEMEDEMQSPLICKRKGMEEVSRSRKKKKKSKAKDSRNPIPLVIINPPTVQTTTTSPFPS 93

Query: 64 K 65
          K
Sbjct: 94 K 94

BLAST of MELO3C008763 vs. NCBI nr
Match: gi|700195834|gb|KGN51011.1| (hypothetical protein Csa_5G406560 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 7.5e-09
Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 1

Query: 4   KEKKKGIKDPLIHKRKGEEEASRSRKREKKPKAKDSRDPIHLVIINRPTDQTTTTSPTPS 63
           +E++K  + PL+HKRKG++E S S+K+EKKP+AK+S+DP  L I      QTT T+ + S
Sbjct: 41  EEREKEKQTPLVHKRKGKDEGSGSKKQEKKPRAKESKDPFPLAIFTPHVAQTTKTTYSLS 100

Query: 64  KTP--PPSIIQIPSPQKSKMPR 84
           K+P   P+   +PS +    P+
Sbjct: 101 KSPTRTPTKTTLPSQEHQCPPK 122

BLAST of MELO3C008763 vs. NCBI nr
Match: gi|700202635|gb|KGN57768.1| (hypothetical protein Csa_3G284530 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 5.9e-06
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1

Query: 4   KEKKKGIKDPLIHKRKGEEEASRSRKREKKPKAKDSRDPIHLVIINRPTDQTT--TTSPT 63
           K+KKK  K  L  + K +      RK EKKP+ K+S+DP+ LV+I  PT QTT  T  P+
Sbjct: 48  KKKKKKKKSHLSTRGKAKARRPGQRKEEKKPRDKESKDPLPLVVITLPTAQTTKATILPS 107

Query: 64  PSKTP 67
           PSKTP
Sbjct: 108 PSKTP 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LY93_CUCSA7.8e-1368.85Uncharacterized protein OS=Cucumis sativus GN=Csa_1G676915 PE=4 SV=1[more]
A0A0A0KTK5_CUCSA5.2e-0942.68Uncharacterized protein OS=Cucumis sativus GN=Csa_5G406560 PE=4 SV=1[more]
A0A0A0L7I4_CUCSA4.1e-0649.23Uncharacterized protein OS=Cucumis sativus GN=Csa_3G284530 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700211657|gb|KGN66753.1|1.1e-1268.85hypothetical protein Csa_1G676915 [Cucumis sativus][more]
gi|700195834|gb|KGN51011.1|7.5e-0942.68hypothetical protein Csa_5G406560 [Cucumis sativus][more]
gi|700202635|gb|KGN57768.1|5.9e-0649.23hypothetical protein Csa_3G284530 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008763T1MELO3C008763T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None