MELO3C008724 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008724
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCleavage and polyadenylation specificity factor subunit 1
Locationchr5 : 17903860 .. 17904457 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAAGATATGCCTAGATCAAATTTCAATGTGGAATTGGACGCTGCCAATGCTACGTGGTTGGTAAATGATGTGGCCTTGCTGTCAACCAAGACTGGGGAGCTATTATTGCTGGCACTTGTTTATGATGGACGGTGAGCACTTCCATTTTTCATGATGCTCATATATTTTCCATTTCATAGCTTCACCATCATAATTGTCAGCTTCTCTCATGCTAACATTTTGAGGATGGAATAATACTCTGATTTGCAGGGTTGTGCAAAGACTTGATCTTTCAAAGTCTAAAGCTTCAGTACTTGCATCGGTTAGTTTGATGCTACTTTATCCTACTATTTTAGTTTCTAGTTTGATTAAAAAACGAGGTTCATGTATGACTATATAAATTCTCTTTTATTATCGATAGGGAACTTTACAGAATATTGAAACTGATCTTTATGTACATCTTGTTGAAATGATATGTAGGGTATCGCATCAATTGGAAATTCATTATTTTTTCTGGGCAGTCGATTGGGAGATAGTTTACTTGTGCAGTTTAGTTGTGGAGTGGGATCCTCAGGATTGGCATCCAATTTAAAGGACGAGGTTTGTTGGGATCCATAA

mRNA sequence

TCAAGATATGCCTAGATCAAATTTCAATGTGGAATTGGACGCTGCCAATGCTACGTGGTTGGTAAATGATGTGGCCTTGCTGTCAACCAAGACTGGGGAGCTATTATTGCTGGCACTTGTTTATGATGGACGGGTTGTGCAAAGACTTGATCTTTCAAAGTCTAAAGCTTCAGTACTTGCATCGGGTATCGCATCAATTGGAAATTCATTATTTTTTCTGGGCAGTCGATTGGGAGATAGTTTACTTGTGCAGTTTAGTTGTGGAGTGGGATCCTCAGGATTGGCATCCAATTTAAAGGACGAGGTTTGTTGGGATCCATAA

Coding sequence (CDS)

TCAAGATATGCCTAGATCAAATTTCAATGTGGAATTGGACGCTGCCAATGCTACGTGGTTGGTAAATGATGTGGCCTTGCTGTCAACCAAGACTGGGGAGCTATTATTGCTGGCACTTGTTTATGATGGACGGGTTGTGCAAAGACTTGATCTTTCAAAGTCTAAAGCTTCAGTACTTGCATCGGGTATCGCATCAATTGGAAATTCATTATTTTTTCTGGGCAGTCGATTGGGAGATAGTTTACTTGTGCAGTTTAGTTGTGGAGTGGGATCCTCAGGATTGGCATCCAATTTAAAGGACGAGGTTTGTTGGGATCCATAA

Protein sequence

QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLASGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDEVCWDP*
Homology
[Close]
BLAST of MELO3C008724 vs. Swiss-Prot
Match: CPSF1_ARATH (Cleavage and polyadenylation specificity factor subunit 1 OS=Arabidopsis thaliana GN=CPSF160 PE=1 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 9.8e-36
Identity = 76/101 (75.25%), Postives = 84/101 (83.17%), Query Frame = 1 

Query: 1   QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 60
           Q++P SNF+VELDAA+ TW+ NDVALLSTK+GELLLL L+YDGR VQRLDLSKSKASVLA
Sbjct: 356 QELPASNFSVELDAAHGTWISNDVALLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLA 415

Query: 61  SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE 102
           S I S+GNSLFFLGSRLGDSLLVQFSC  G +     L+DE
Sbjct: 416 SDITSVGNSLFFLGSRLGDSLLVQFSCRSGPAASLPGLRDE 456

[Close]
BLAST of MELO3C008724 vs. Swiss-Prot
Match: CPSF1_ORYSJ (Probable cleavage and polyadenylation specificity factor subunit 1 OS=Oryza sativa subsp. japonica GN=Os04g0252200 PE=3 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-29
Identity = 64/85 (75.29%), Postives = 72/85 (84.71%), Query Frame = 1 

Query: 2   DMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLAS 61
           ++ +SNF VELDAA ATWL ND+ + STK GE+LLL +VYDGRVVQRLDL KSKASVL+S
Sbjct: 359 EISKSNFQVELDAAKATWLSNDIVMFSTKAGEMLLLTVVYDGRVVQRLDLMKSKASVLSS 418

Query: 62  GIASIGNSLFFLGSRLGDSLLVQFS 87
            + SIGNS FFLGSRLGDSLLVQFS
Sbjct: 419 AVTSIGNSFFFLGSRLGDSLLVQFS 443

[Close]
BLAST of MELO3C008724 vs. Swiss-Prot
Match: CPSF1_DROME (Cleavage and polyadenylation specificity factor subunit 1 OS=Drosophila melanogaster GN=Cpsf160 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.9e-08
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 1 

Query: 4   PRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDG-RVVQRLDLSKSKASVLASG 63
           P+    + LD AN  ++  D  ++S +TG+L +L L  D  R V+     K+ ASVL S 
Sbjct: 325 PQDGVRISLDCANFAFIDVDKLVISLRTGDLYVLTLCVDSMRTVRNFHFHKAAASVLTSC 384

Query: 64  IASIGNSLFFLGSRLGDSLLVQFS 87
           I  + +   FLGSRLG+SLL+ F+
Sbjct: 385 ICVLHSEYIFLGSRLGNSLLLHFT 408

[Close]
BLAST of MELO3C008724 vs. Swiss-Prot
Match: CPSF1_HUMAN (Cleavage and polyadenylation specificity factor subunit 1 OS=Homo sapiens GN=CPSF1 PE=1 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 8.6e-08
Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 1 

Query: 10  VELDAANATWLVNDVALLSTKTGELLLLALVYDG-RVVQRLDLSKSKASVLASGIASIGN 69
           + LD A AT++  D  ++S K GE+ +L L+ DG R V+     K+ ASVL + + ++  
Sbjct: 320 ITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEP 379

Query: 70  SLFFLGSRLGDSLLVQFS 87
              FLGSRLG+SLL++++
Sbjct: 380 GYLFLGSRLGNSLLLKYT 397

[Close]
BLAST of MELO3C008724 vs. Swiss-Prot
Match: CPSF1_BOVIN (Cleavage and polyadenylation specificity factor subunit 1 OS=Bos taurus GN=CPSF1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.3e-07
Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 1 

Query: 10  VELDAANATWLVNDVALLSTKTGELLLLALVYDG-RVVQRLDLSKSKASVLASGIASIGN 69
           + LD A A ++  D  ++S K GE+ +L L+ DG R V+     K+ ASVL + + ++  
Sbjct: 323 ITLDCAQAAFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEP 382

Query: 70  SLFFLGSRLGDSLLVQFS 87
              FLGSRLG+SLL++++
Sbjct: 383 GYLFLGSRLGNSLLLKYT 400

[Close]
BLAST of MELO3C008724 vs. TrEMBL
Match: A0A0A0LKI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074280 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.5e-46
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 1 

Query: 1   QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 60
           QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVL 
Sbjct: 352 QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLT 411

Query: 61  SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE 102
           SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE
Sbjct: 412 SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE 452

[Close]
BLAST of MELO3C008724 vs. TrEMBL
Match: M5X6F1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000211mg PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-39
Identity = 86/102 (84.31%), Postives = 94/102 (92.16%), Query Frame = 1 

Query: 1   QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 60
           Q+MPRS+F VELD ANATWL+NDVALLSTKTGELLLL LVYDGRVVQRLDLSKSKASVL 
Sbjct: 355 QEMPRSSFTVELDTANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLT 414

Query: 61  SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDEV 103
           SGI  +GNSLFFLGSRLGDSLLVQF+CGVG S L+S++KDEV
Sbjct: 415 SGITKVGNSLFFLGSRLGDSLLVQFTCGVGGSVLSSDMKDEV 456

[Close]
BLAST of MELO3C008724 vs. TrEMBL
Match: A0A072UAN0_MEDTR (Cleavage and polyadenylation specificity factor subunit 1 OS=Medicago truncatula GN=MTR_6g461810 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-39
Identity = 85/102 (83.33%), Postives = 96/102 (94.12%), Query Frame = 1 

Query: 1   QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 60
           Q+MPRS+FNVELDAANATWL+NDVALLSTKTGELLLL L+YDGRVVQRLDLSKSKASVL+
Sbjct: 350 QEMPRSSFNVELDAANATWLLNDVALLSTKTGELLLLTLIYDGRVVQRLDLSKSKASVLS 409

Query: 61  SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDEV 103
           SG+ +IGNS+FFL SRLGDS+LVQFSCG G S L+SNLK+EV
Sbjct: 410 SGVTTIGNSMFFLASRLGDSMLVQFSCGSGVSMLSSNLKEEV 451

[Close]
BLAST of MELO3C008724 vs. TrEMBL
Match: A0A0R0FSW8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G203900 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.0e-39
Identity = 86/102 (84.31%), Postives = 96/102 (94.12%), Query Frame = 1 

Query: 1   QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 60
           Q++PRS+FNVELDAANATWL++DVALLSTKTGELLLL LVYDGRVVQRLDLSKSKASVL+
Sbjct: 167 QEIPRSSFNVELDAANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLS 226

Query: 61  SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDEV 103
           SGI +IGNSLFFL SRLGDS+LVQFSCG G S L+SNLK+EV
Sbjct: 227 SGITTIGNSLFFLASRLGDSMLVQFSCGSGVSMLSSNLKEEV 268

[Close]
BLAST of MELO3C008724 vs. TrEMBL
Match: A0A0R0G307_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G203900 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.0e-39
Identity = 86/102 (84.31%), Postives = 96/102 (94.12%), Query Frame = 1 

Query: 1   QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 60
           Q++PRS+FNVELDAANATWL++DVALLSTKTGELLLL LVYDGRVVQRLDLSKSKASVL+
Sbjct: 156 QEIPRSSFNVELDAANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLS 215

Query: 61  SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDEV 103
           SGI +IGNSLFFL SRLGDS+LVQFSCG G S L+SNLK+EV
Sbjct: 216 SGITTIGNSLFFLASRLGDSMLVQFSCGSGVSMLSSNLKEEV 257

[Close]
BLAST of MELO3C008724 vs. TAIR10
Match: AT5G51660.1 (AT5G51660.1 cleavage and polyadenylation specificity factor 160)

HSP 1 Score: 150.6 bits (379), Expect = 5.5e-37
Identity = 76/101 (75.25%), Postives = 84/101 (83.17%), Query Frame = 1 

Query: 1   QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 60
           Q++P SNF+VELDAA+ TW+ NDVALLSTK+GELLLL L+YDGR VQRLDLSKSKASVLA
Sbjct: 356 QELPASNFSVELDAAHGTWISNDVALLSTKSGELLLLTLIYDGRAVQRLDLSKSKASVLA 415

Query: 61  SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE 102
           S I S+GNSLFFLGSRLGDSLLVQFSC  G +     L+DE
Sbjct: 416 SDITSVGNSLFFLGSRLGDSLLVQFSCRSGPAASLPGLRDE 456

[Close]
BLAST of MELO3C008724 vs. NCBI nr
Match: gi|659082458|ref|XP_008441851.1| (PREDICTED: cleavage and polyadenylation specificity factor subunit 1 isoform X2 [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-46
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 60
           QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA
Sbjct: 113 QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 172

Query: 61  SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE 102
           SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE
Sbjct: 173 SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE 213

[Close]
BLAST of MELO3C008724 vs. NCBI nr
Match: gi|659082456|ref|XP_008441850.1| (PREDICTED: cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-46
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 60
           QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA
Sbjct: 352 QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 411

Query: 61  SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE 102
           SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE
Sbjct: 412 SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE 452

[Close]
BLAST of MELO3C008724 vs. NCBI nr
Match: gi|778667872|ref|XP_011648998.1| (PREDICTED: cleavage and polyadenylation specificity factor subunit 1 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 3.6e-46
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 1 

Query: 1   QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 60
           QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVL 
Sbjct: 352 QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLT 411

Query: 61  SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE 102
           SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE
Sbjct: 412 SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDE 452

[Close]
BLAST of MELO3C008724 vs. NCBI nr
Match: gi|1009122186|ref|XP_015877866.1| (PREDICTED: cleavage and polyadenylation specificity factor subunit 1 [Ziziphus jujuba])

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-40
Identity = 89/102 (87.25%), Postives = 97/102 (95.10%), Query Frame = 1 

Query: 1   QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 60
           Q+MPRS+FNVELDAANATWL+NDVALLSTKTGELLLL +VYDGRVVQRLDLSKSKASVL 
Sbjct: 354 QEMPRSSFNVELDAANATWLLNDVALLSTKTGELLLLTIVYDGRVVQRLDLSKSKASVLT 413

Query: 61  SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDEV 103
           SGI +IGNSLFFLGSRLGDSLLVQF+CGVGSS ++S LKDEV
Sbjct: 414 SGITTIGNSLFFLGSRLGDSLLVQFTCGVGSSIMSSALKDEV 455

[Close]
BLAST of MELO3C008724 vs. NCBI nr
Match: gi|596047741|ref|XP_007220310.1| (hypothetical protein PRUPE_ppa000211mg [Prunus persica])

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-39
Identity = 86/102 (84.31%), Postives = 94/102 (92.16%), Query Frame = 1 

Query: 1   QDMPRSNFNVELDAANATWLVNDVALLSTKTGELLLLALVYDGRVVQRLDLSKSKASVLA 60
           Q+MPRS+F VELD ANATWL+NDVALLSTKTGELLLL LVYDGRVVQRLDLSKSKASVL 
Sbjct: 355 QEMPRSSFTVELDTANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLT 414

Query: 61  SGIASIGNSLFFLGSRLGDSLLVQFSCGVGSSGLASNLKDEV 103
           SGI  +GNSLFFLGSRLGDSLLVQF+CGVG S L+S++KDEV
Sbjct: 415 SGITKVGNSLFFLGSRLGDSLLVQFTCGVGGSVLSSDMKDEV 456

The following BLAST results are available for this feature:
BLAST of MELO3C008724 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CPSF1_ARATH9.8e-3675.25Cleavage and polyadenylation specificity factor subunit 1 OS=Arabidopsis thalian... [more]
CPSF1_ORYSJ1.8e-2975.29Probable cleavage and polyadenylation specificity factor subunit 1 OS=Oryza sati... [more]
CPSF1_DROME3.9e-0839.29Cleavage and polyadenylation specificity factor subunit 1 OS=Drosophila melanoga... [more]
CPSF1_HUMAN8.6e-0839.74Cleavage and polyadenylation specificity factor subunit 1 OS=Homo sapiens GN=CPS... [more]
CPSF1_BOVIN3.3e-0738.46Cleavage and polyadenylation specificity factor subunit 1 OS=Bos taurus GN=CPSF1... [more]
BLAST of MELO3C008724 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKI9_CUCSA2.5e-4699.01Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074280 PE=4 SV=1[more]
M5X6F1_PRUPE1.0e-3984.31Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000211mg PE=4 SV=1[more]
A0A072UAN0_MEDTR1.3e-3983.33Cleavage and polyadenylation specificity factor subunit 1 OS=Medicago truncatula... [more]
A0A0R0FSW8_SOYBN5.0e-3984.31Uncharacterized protein OS=Glycine max GN=GLYMA_16G203900 PE=4 SV=1[more]
A0A0R0G307_SOYBN5.0e-3984.31Uncharacterized protein OS=Glycine max GN=GLYMA_16G203900 PE=4 SV=1[more]
BLAST of MELO3C008724 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51660.15.5e-3775.25 cleavage and polyadenylation specificity factor 160[more]
BLAST of MELO3C008724 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082458|ref|XP_008441851.1|1.2e-46100.00PREDICTED: cleavage and polyadenylation specificity factor subunit 1 isoform X2 ... [more]
gi|659082456|ref|XP_008441850.1|1.2e-46100.00PREDICTED: cleavage and polyadenylation specificity factor subunit 1 isoform X1 ... [more]
gi|778667872|ref|XP_011648998.1|3.6e-4699.01PREDICTED: cleavage and polyadenylation specificity factor subunit 1 [Cucumis sa... [more]
gi|1009122186|ref|XP_015877866.1|1.0e-4087.25PREDICTED: cleavage and polyadenylation specificity factor subunit 1 [Ziziphus j... [more]
gi|596047741|ref|XP_007220310.1|1.5e-3984.31hypothetical protein PRUPE_ppa000211mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048449 floral organ formation
biological_process GO:0016570 histone modification
biological_process GO:0009909 regulation of flower development
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008724T1MELO3C008724T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYcoord: 3..102
score: 7.2
NoneNo IPR availablePANTHERPTHR10644:SF2CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1coord: 3..102
score: 7.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C008724CSPI02G07260Wild cucumber (PI 183967)cpimeB139
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008724Watermelon (Charleston Gray)mewcgB367
MELO3C008724Watermelon (97103) v1mewmB426
MELO3C008724Cucurbita pepo (Zucchini)cpemeB102
MELO3C008724Cucurbita pepo (Zucchini)cpemeB777
MELO3C008724Bottle gourd (USVL1VR-Ls)lsimeB115
MELO3C008724Cucumber (Gy14) v2cgybmeB120
MELO3C008724Silver-seed gourdcarmeB0170
MELO3C008724Silver-seed gourdcarmeB0712
MELO3C008724Cucumber (Chinese Long) v3cucmeB141
MELO3C008724Watermelon (97103) v2mewmbB369
MELO3C008724Wax gourdmewgoB456
MELO3C008724Wax gourdmewgoB468
MELO3C008724Cucumber (Gy14) v1cgymeB320
MELO3C008724Cucurbita maxima (Rimu)cmameB175
MELO3C008724Cucurbita maxima (Rimu)cmameB737
MELO3C008724Cucurbita moschata (Rifu)cmomeB164
MELO3C008724Cucurbita moschata (Rifu)cmomeB725
MELO3C008724Cucumber (Chinese Long) v2cumeB133