MELO3C008643 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008643
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative helicase
Locationchr5 : 15993883 .. 15995904 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATTTTCTTTCTTGTTAAAGAGAAGAGAAAAGAAAAGGGATCCATTAAATACTTCTTTCTTGGCAGGCTAGATGGAAGAACTGAGAGTTCCGAAAGACAGAAGATTGTTGAGAGGTTTAATGAGCCTCTAAATAAGAGGGTAAAATGTACCCTGATATCAACTAGAGCTGGATCATTGGGCATCAATCTTCATTCTGCTAACCGTGTCATTATAGTGGATGGTTCTTGGAATCCAACTTATGATCTTCAGGCTATTTATCGAGCTTGGAGGTAGTTAGTTATCTTGTTCTTTTTTCTTCCTACTGAAGAATATGATAGCTTATGAAAATTCAATTGACCCTATCGGACTTGGATGCATATTTTCTGTTTATAACCAAAAAGAATTTTTCAAACGGGCATGCCATGGGGAACTTGGGTATTTTCACCAGGAACTATTTTGCTGAGTTTGTGAACTATCCTTCATACGATAACCTTCAGCATCTAGAATTAGTTCTAACTTGTTAGTTAGCAATGGATCGAAGAAAGAAATTCAAAGTTCTTAATTTTTATTGATATAGTCTGCCTGATAAAATTAGCAATGAACGAAGAAAAAATATTGAAGTTCTTAAATTTTTATTGTAAGTTTGCATGACATATAGAGGATGCATTGGCCTCCTTTATATGCCATGCTATTTTTCACAGTAGGTTATGGAAGTTTACTTTATTGTATTTCTTAGGCATGATACAGCCATAATCTATAACCCTAAAATAGACCTGCAGTAAGAAAAGTCAAAAAAGAAAGAAGTGTACAAGTGAACTACTAAGATGCAGGAAATAATTGCAGATTCTCGAAGGTAATGACATAATATATGACTAATGGACCTAAAGGAGAGGGATGACCGGGTGCGATCATACCAGCACTAATGCACCGGATCCCGTTAGAACTCTGCAGCTAAGCGTGTTAATACTAAGTCGGATGACCACTTGGGAAGTCCTCGTGTTACATCCCTTTTTAAGGAGAGGGATGACCCCATTCTTTAACACCTCAACATGTCCTGCAAGGATGGTGTGAAGAAATAATTTATATTTCTGTTTTGAAGCTAAAACCATTAATAGGCTTTTAAATGTGATCTCAAATTTCATGAACTTTCAAACTTTTTTGTATTATTTTTATAAATGATGGAACGTGTACCCTCTTGTCATTTACTTATATGAAAATAATGGAAATGTTGATTTAGCTTTCTAATTTTTGTTGACAGTTGCATCAATTTTTACCTCATCTCTGTCTCTAGATTATTGTGGACATGATATCTTGATTTATTTCTTTCTTTTGTTATCAATGAGAAGGTTTTTTTTGGCTCTTTTGTTACATTTTTCTCACTCGTATATATATATACATATATATATACACACACATGCTTGCACACGCATGCATATAAACATATTCAAACATTTAGTTACTAGTTCACTATCGCTCTTCCCCATCATTATTCTTCAACAAGAGCCACTCTTAACTTGGTAGCTAAATTTCATAGTGACCACTAAAACTTTGTTGTTTAATATATTTCAATTATCATAATTTTATTTTTTAACCTGCAGATATGGCCAAACAAAACCGGTGTTTGCTTACCGATTTTTGGCGCATGGAACAATGGAAGAAAAAATTTATAAGCGTCAGGTATGATAAAACATTTTCTTACATTTTATGATTGCAGATGCAGTTTCTTTTATGGACTTGAATTTGATTGAGAAGTAAATTTGATAGGTAACGAAGGAGGGACTGGCTGCTAGAGTTGTTGATCGCCAACAGGTATATCGAACTATTTCTCGGGAAGAAATGTTGCATCTTTTTGAATTTGGTGATGATGAGAGTCTTGAGGCTTCCACTGAGTTGGACCAAGGAAATGGGCATACATCCCACCAGATTATGACTGGGCATCAAGGAAACGTGCTGAAGCAGAAAGGGCCTCTTTCCCATGGCAATTGTTCATCCGACAAGTTAATGGAAACTTTACTTGGGAAACACCATCCAAGGTAG

mRNA sequence

ATGAAAATTTTCTTTCTTGTTAAAGAGAAGAGAAAAGAAAAGGGATCCATTAAATACTTCTTTCTTGGCAGGCTAGATGGAAGAACTGAGAGTTCCGAAAGACAGAAGATTGTTGAGAGGTTTAATGAGCCTCTAAATAAGAGGGTAAAATGTACCCTGATATCAACTAGAGCTGGATCATTGGGCATCAATCTTCATTCTGCTAACCGTGTCATTATAGTGGATGGTTCTTGGAATCCAACTTATGATCTTCAGGCTATTTATCGAGCTTGGAGATATGGCCAAACAAAACCGGTGTTTGCTTACCGATTTTTGGCGCATGGAACAATGGAAGAAAAAATTTATAAGCGTCAGGTAACGAAGGAGGGACTGGCTGCTAGAGTTGTTGATCGCCAACAGGTATATCGAACTATTTCTCGGGAAGAAATGTTGCATCTTTTTGAATTTGGTGATGATGAGAGTCTTGAGGCTTCCACTGAGTTGGACCAAGGAAATGGGCATACATCCCACCAGATTATGACTGGGCATCAAGGAAACGTGCTGAAGCAGAAAGGGCCTCTTTCCCATGGCAATTGTTCATCCGACAAGTTAATGGAAACTTTACTTGGGAAACACCATCCAAGGTAG

Coding sequence (CDS)

ATGAAAATTTTCTTTCTTGTTAAAGAGAAGAGAAAAGAAAAGGGATCCATTAAATACTTCTTTCTTGGCAGGCTAGATGGAAGAACTGAGAGTTCCGAAAGACAGAAGATTGTTGAGAGGTTTAATGAGCCTCTAAATAAGAGGGTAAAATGTACCCTGATATCAACTAGAGCTGGATCATTGGGCATCAATCTTCATTCTGCTAACCGTGTCATTATAGTGGATGGTTCTTGGAATCCAACTTATGATCTTCAGGCTATTTATCGAGCTTGGAGATATGGCCAAACAAAACCGGTGTTTGCTTACCGATTTTTGGCGCATGGAACAATGGAAGAAAAAATTTATAAGCGTCAGGTAACGAAGGAGGGACTGGCTGCTAGAGTTGTTGATCGCCAACAGGTATATCGAACTATTTCTCGGGAAGAAATGTTGCATCTTTTTGAATTTGGTGATGATGAGAGTCTTGAGGCTTCCACTGAGTTGGACCAAGGAAATGGGCATACATCCCACCAGATTATGACTGGGCATCAAGGAAACGTGCTGAAGCAGAAAGGGCCTCTTTCCCATGGCAATTGTTCATCCGACAAGTTAATGGAAACTTTACTTGGGAAACACCATCCAAGGTAG

Protein sequence

MKIFFLVKEKRKEKGSIKYFFLGRLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEMLHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLGKHHPR*
Homology
[Close]
BLAST of MELO3C008643 vs. Swiss-Prot
Match: CHR20_ARATH (Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana GN=ATRX PE=2 SV=2)

HSP 1 Score: 251.9 bits (642), Expect = 6.1e-66
Identity = 134/187 (71.66%), Postives = 150/187 (80.21%), Query Frame = 1 

Query: 24   RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
            R+DG+TESSERQK+V+RFNEP NKRVKCTLISTRAGSLGINL++ANRVIIVDGSWNPTYD
Sbjct: 1172 RIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1231

Query: 84   LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
            LQAI+RAWRYGQ KPVFAYR +A GT+EEKIYKRQVTKEGLAARVVDRQQV+RTIS+EEM
Sbjct: 1232 LQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1291

Query: 144  LHLFEF-GDDESLEASTELDQGN--GHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMET 203
            LHLFEF  DDE  EA TE+ + N  GH++       Q  +  +K  LS      DKLME 
Sbjct: 1292 LHLFEFDDDDEKSEAVTEISKQNEAGHSN----LVEQAILWTKKATLS--RVGGDKLMEN 1351

Query: 204  LLGKHHP 208
            LL +H P
Sbjct: 1352 LLQRHGP 1352

[Close]
BLAST of MELO3C008643 vs. Swiss-Prot
Match: ATRX_PONPY (Transcriptional regulator ATRX OS=Pongo pygmaeus GN=ATRX PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37
Identity = 80/147 (54.42%), Postives = 103/147 (70.07%), Query Frame = 1 

Query: 6    LVKEKRKEKGSIKYFFLGRLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINL 65
            + K + K   +I Y+   RLDG T +  R+K  E FN+  N R +  +IST+AGSLGINL
Sbjct: 2070 IYKGEGKWLRNIDYY---RLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINL 2129

Query: 66   HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLA 125
             +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YRFLA GTME+KIY RQVTK+ L+
Sbjct: 2130 VAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLS 2189

Query: 126  ARVVDRQQVYRTISREEMLHLFEFGDD 153
             RVVD+QQV R  +  E+  L+ F  D
Sbjct: 2190 FRVVDQQQVERHFTMNELTELYTFEPD 2213

[Close]
BLAST of MELO3C008643 vs. Swiss-Prot
Match: ATRX_PANTR (Transcriptional regulator ATRX OS=Pan troglodytes GN=ATRX PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37
Identity = 80/147 (54.42%), Postives = 103/147 (70.07%), Query Frame = 1 

Query: 6    LVKEKRKEKGSIKYFFLGRLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINL 65
            + K + K   +I Y+   RLDG T +  R+K  E FN+  N R +  +IST+AGSLGINL
Sbjct: 2070 IYKGEGKWLRNIDYY---RLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINL 2129

Query: 66   HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLA 125
             +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YRFLA GTME+KIY RQVTK+ L+
Sbjct: 2130 VAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLS 2189

Query: 126  ARVVDRQQVYRTISREEMLHLFEFGDD 153
             RVVD+QQV R  +  E+  L+ F  D
Sbjct: 2190 FRVVDQQQVERHFTMNELTELYTFEPD 2213

[Close]
BLAST of MELO3C008643 vs. Swiss-Prot
Match: ATRX_HUMAN (Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37
Identity = 80/147 (54.42%), Postives = 103/147 (70.07%), Query Frame = 1 

Query: 6    LVKEKRKEKGSIKYFFLGRLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINL 65
            + K + K   +I Y+   RLDG T +  R+K  E FN+  N R +  +IST+AGSLGINL
Sbjct: 2070 IYKGEGKWLRNIDYY---RLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINL 2129

Query: 66   HSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLA 125
             +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YRFLA GTME+KIY RQVTK+ L+
Sbjct: 2130 VAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLS 2189

Query: 126  ARVVDRQQVYRTISREEMLHLFEFGDD 153
             RVVD+QQV R  +  E+  L+ F  D
Sbjct: 2190 FRVVDQQQVERHFTMNELTELYTFEPD 2213

[Close]
BLAST of MELO3C008643 vs. Swiss-Prot
Match: ATRX_MOUSE (Transcriptional regulator ATRX OS=Mus musculus GN=Atrx PE=1 SV=3)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37
Identity = 76/129 (58.91%), Postives = 95/129 (73.64%), Query Frame = 1 

Query: 24   RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
            RLDG T +  R+K  E FN+  N R +  +IST+AGSLGINL +ANRVII D SWNP+YD
Sbjct: 2068 RLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYD 2127

Query: 84   LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
            +Q+I+R +R+GQTKPV+ YRFLA GTME+KIY RQVTK+ L+ RVVD+QQV R  +  E+
Sbjct: 2128 IQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNEL 2187

Query: 144  LHLFEFGDD 153
              L+ F  D
Sbjct: 2188 TELYTFEPD 2196

[Close]
BLAST of MELO3C008643 vs. TrEMBL
Match: A0A0A0LJN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G076015 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 9.0e-101
Identity = 182/185 (98.38%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 24  RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
           RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD
Sbjct: 47  RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 106

Query: 84  LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
           LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM
Sbjct: 107 LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 166

Query: 144 LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 203
           LHLFEFGD+E+LEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHG+CSSDKLMETLLG
Sbjct: 167 LHLFEFGDEENLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGSCSSDKLMETLLG 226

Query: 204 KHHPR 209
           KHHPR
Sbjct: 227 KHHPR 231

[Close]
BLAST of MELO3C008643 vs. TrEMBL
Match: A0A061F1R3_THECC (Chromatin remodeling complex subunit isoform 1 OS=Theobroma cacao GN=TCM_026141 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.1e-81
Identity = 152/185 (82.16%), Postives = 167/185 (90.27%), Query Frame = 1 

Query: 24   RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
            RLDGRTESSERQK+VE+FN P+NKRVKCTLISTRAGSLGINL++ANRVIIVDGSWNPTYD
Sbjct: 1210 RLDGRTESSERQKLVEKFNAPMNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1269

Query: 84   LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
            LQAIYRAWRYGQTKPVFAYR +AHGTMEEKIYKRQVTKEGLAARVVDRQQV+RTIS+EEM
Sbjct: 1270 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1329

Query: 144  LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 203
            LHLFEFGDDE+ +   EL + NG   +Q +T   G  LKQK PLSHG+CSSDKLME+LLG
Sbjct: 1330 LHLFEFGDDENFDTLMELSEENG---NQNLTCEVGKSLKQKMPLSHGSCSSDKLMESLLG 1389

Query: 204  KHHPR 209
            KHHPR
Sbjct: 1390 KHHPR 1391

[Close]
BLAST of MELO3C008643 vs. TrEMBL
Match: A5C3T6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027610 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.0e-80
Identity = 151/185 (81.62%), Postives = 166/185 (89.73%), Query Frame = 1 

Query: 24   RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
            RLDGRTE SERQK+VERFN+PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD
Sbjct: 981  RLDGRTEGSERQKLVERFNDPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1040

Query: 84   LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
            LQAIYRAWRYGQTKPVFAYR +AHGTMEEKIYKRQVTKEGLAARVVDRQQV+RTIS+EEM
Sbjct: 1041 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1100

Query: 144  LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 203
            LHLF+FGDDE+ +   E  +   HT++Q MTG  GN LK K  LSHG+CSSDKLME+LL 
Sbjct: 1101 LHLFDFGDDENPDILPERGKEEEHTTNQNMTGQVGNSLKDKLSLSHGSCSSDKLMESLLV 1160

Query: 204  KHHPR 209
            +H+PR
Sbjct: 1161 RHYPR 1165

[Close]
BLAST of MELO3C008643 vs. TrEMBL
Match: E0CU60_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g01460 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.0e-80
Identity = 151/185 (81.62%), Postives = 166/185 (89.73%), Query Frame = 1 

Query: 24   RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
            RLDGRTE SERQK+VERFN+PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD
Sbjct: 1164 RLDGRTEGSERQKLVERFNDPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1223

Query: 84   LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
            LQAIYRAWRYGQTKPVFAYR +AHGTMEEKIYKRQVTKEGLAARVVDRQQV+RTIS+EEM
Sbjct: 1224 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1283

Query: 144  LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 203
            LHLF+FGDDE+ +   E  +   HT++Q MTG  GN LK K  LSHG+CSSDKLME+LL 
Sbjct: 1284 LHLFDFGDDENPDILPERGKEEEHTTNQNMTGQVGNSLKDKLSLSHGSCSSDKLMESLLV 1343

Query: 204  KHHPR 209
            +H+PR
Sbjct: 1344 RHYPR 1348

[Close]
BLAST of MELO3C008643 vs. TrEMBL
Match: A0A067JW49_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23567 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.5e-79
Identity = 149/185 (80.54%), Postives = 162/185 (87.57%), Query Frame = 1 

Query: 24   RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
            RLDGRTESSERQ++VE+FN+P NKRVKCTLISTRAGSLGINLH+ANRV+IVDGSWNPTYD
Sbjct: 1213 RLDGRTESSERQRMVEKFNDPENKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYD 1272

Query: 84   LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
            LQAIYRAWRYGQ KPVFAYR +AHGTMEEKIYKRQVTKEGLAARVVDRQQ++RTISREEM
Sbjct: 1273 LQAIYRAWRYGQKKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQIHRTISREEM 1332

Query: 144  LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 203
            LHLFEFGDDE+ +   EL Q    T  Q M+   G  LKQ  PLSHG+CSSDKLME LLG
Sbjct: 1333 LHLFEFGDDENTDPQIELGQEVRQTDDQNMSCQVGTSLKQNLPLSHGSCSSDKLMERLLG 1392

Query: 204  KHHPR 209
            KHHPR
Sbjct: 1393 KHHPR 1397

[Close]
BLAST of MELO3C008643 vs. TAIR10
Match: AT1G08600.3 (AT1G08600.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 251.9 bits (642), Expect = 3.4e-67
Identity = 134/187 (71.66%), Postives = 150/187 (80.21%), Query Frame = 1 

Query: 24   RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
            R+DG+TESSERQK+V+RFNEP NKRVKCTLISTRAGSLGINL++ANRVIIVDGSWNPTYD
Sbjct: 1172 RIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1231

Query: 84   LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
            LQAI+RAWRYGQ KPVFAYR +A GT+EEKIYKRQVTKEGLAARVVDRQQV+RTIS+EEM
Sbjct: 1232 LQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM 1291

Query: 144  LHLFEF-GDDESLEASTELDQGN--GHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMET 203
            LHLFEF  DDE  EA TE+ + N  GH++       Q  +  +K  LS      DKLME 
Sbjct: 1292 LHLFEFDDDDEKSEAVTEISKQNEAGHSN----LVEQAILWTKKATLS--RVGGDKLMEN 1351

Query: 204  LLGKHHP 208
            LL +H P
Sbjct: 1352 LLQRHGP 1352

[Close]
BLAST of MELO3C008643 vs. TAIR10
Match: AT3G19210.1 (AT3G19210.1 homolog of RAD54)

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-27
Identity = 71/173 (41.04%), Postives = 100/173 (57.80%), Query Frame = 1 

Query: 18  KYFFLGRLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 77
           +Y FL RLDG T  S+RQK+V R N+P  K     L+S++AG  G+NL  ANR+++ D  
Sbjct: 575 RYPFL-RLDGSTTISKRQKLVNRLNDP-TKDEFAFLLSSKAGGCGLNLIGANRLVLFDPD 634

Query: 78  WNPTYDLQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRT 137
           WNP  D QA  R WR GQ K V+ YRFL+ GT+EEK+Y+RQ++KEGL  +V+  +Q   +
Sbjct: 635 WNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGL-QKVIQHEQTDNS 694

Query: 138 ------ISREEMLHLFEFGDDESLEASTELD----QGNGHTSHQIMTGHQGNV 181
                 +S E++  LF F  D   E   ++     Q +   +  I  G++ NV
Sbjct: 695 TRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSCSRCQNDASGTENIEEGNENNV 744

[Close]
BLAST of MELO3C008643 vs. TAIR10
Match: AT2G18760.1 (AT2G18760.1 chromatin remodeling 8)

HSP 1 Score: 109.4 bits (272), Expect = 2.7e-24
Identity = 58/137 (42.34%), Postives = 77/137 (56.20%), Query Frame = 1 

Query: 24  RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
           R+DG T   +R  +++ FN   +  V   +++T+ G LG NL  ANRVII D  WNP+ D
Sbjct: 772 RMDGLTPVKQRMALIDEFNNSEDMFV--FVLTTKVGGLGTNLTGANRVIIFDPDWNPSND 831

Query: 84  LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
           +QA  RAWR GQ K V  YR +  GT+EEK+Y RQ+ K  L  +++   Q  R     +M
Sbjct: 832 MQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDM 891

Query: 144 LHLFEFGDDESLEASTE 161
             LF   DD    ASTE
Sbjct: 892 KDLFILKDDGDSNASTE 906

[Close]
BLAST of MELO3C008643 vs. TAIR10
Match: AT1G03750.1 (AT1G03750.1 switch 2)

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 54/108 (50.00%), Postives = 75/108 (69.44%), Query Frame = 1 

Query: 18  KYFFLGRLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGS 77
           K +   RLDG T ++ RQ +V+ FN   +K+V   LIST+AG LG+NL SANRV+I D +
Sbjct: 567 KGYSFARLDGSTPTNLRQSLVDDFNASPSKQV--FLISTKAGGLGLNLVSANRVVIFDPN 626

Query: 78  WNPTYDLQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLA 126
           WNP++DLQA  R++RYGQ + V  +R L+ G++EE +Y RQV K+ L+
Sbjct: 627 WNPSHDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLS 672

[Close]
BLAST of MELO3C008643 vs. TAIR10
Match: AT5G63950.1 (AT5G63950.1 chromatin remodeling 24)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-22
Identity = 57/146 (39.04%), Postives = 86/146 (58.90%), Query Frame = 1 

Query: 2   KIFFLVKEKRKEKGSIKYFFLGRLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSL 61
           K+  L+++     G   Y FL R+DG T++ +R K VE F E         L++++ G L
Sbjct: 759 KMLNLIQDSLTSNG---YSFL-RIDGTTKAPDRLKTVEEFQE--GHVAPIFLLTSQVGGL 818

Query: 62  GINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTK 121
           G+ L  A+RVI+VD +WNP+ D Q++ RA+R GQTK V  YR +   T+EEKIY++QV K
Sbjct: 819 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRKQVYK 878

Query: 122 EGLAARVVDRQQVYRTISREEMLHLF 148
            GL     + ++  R  S++++  LF
Sbjct: 879 GGLFKTATEHKEQIRYFSQQDLRELF 898

[Close]
BLAST of MELO3C008643 vs. NCBI nr
Match: gi|659082341|ref|XP_008441788.1| (PREDICTED: transcriptional regulator ATRX isoform X5 [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 5.3e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 24   RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
            RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD
Sbjct: 1073 RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1132

Query: 84   LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
            LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM
Sbjct: 1133 LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 1192

Query: 144  LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 203
            LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG
Sbjct: 1193 LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 1252

Query: 204  KHHPR 209
            KHHPR
Sbjct: 1253 KHHPR 1257

[Close]
BLAST of MELO3C008643 vs. NCBI nr
Match: gi|659082337|ref|XP_008441786.1| (PREDICTED: transcriptional regulator ATRX isoform X4 [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 5.3e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 24   RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
            RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD
Sbjct: 1082 RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1141

Query: 84   LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
            LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM
Sbjct: 1142 LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 1201

Query: 144  LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 203
            LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG
Sbjct: 1202 LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 1261

Query: 204  KHHPR 209
            KHHPR
Sbjct: 1262 KHHPR 1266

[Close]
BLAST of MELO3C008643 vs. NCBI nr
Match: gi|659082335|ref|XP_008441785.1| (PREDICTED: transcriptional regulator ATRX isoform X3 [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 5.3e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 24   RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
            RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD
Sbjct: 1170 RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1229

Query: 84   LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
            LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM
Sbjct: 1230 LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 1289

Query: 144  LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 203
            LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG
Sbjct: 1290 LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 1349

Query: 204  KHHPR 209
            KHHPR
Sbjct: 1350 KHHPR 1354

[Close]
BLAST of MELO3C008643 vs. NCBI nr
Match: gi|659082333|ref|XP_008441784.1| (PREDICTED: transcriptional regulator ATRX isoform X2 [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 5.3e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 24   RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
            RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD
Sbjct: 1174 RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1233

Query: 84   LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
            LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM
Sbjct: 1234 LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 1293

Query: 144  LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 203
            LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG
Sbjct: 1294 LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 1353

Query: 204  KHHPR 209
            KHHPR
Sbjct: 1354 KHHPR 1358

[Close]
BLAST of MELO3C008643 vs. NCBI nr
Match: gi|659082329|ref|XP_008441780.1| (PREDICTED: transcriptional regulator ATRX isoform X1 [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 5.3e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 24   RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 83
            RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD
Sbjct: 1180 RLDGRTESSERQKIVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1239

Query: 84   LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 143
            LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM
Sbjct: 1240 LQAIYRAWRYGQTKPVFAYRFLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEM 1299

Query: 144  LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 203
            LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG
Sbjct: 1300 LHLFEFGDDESLEASTELDQGNGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLG 1359

Query: 204  KHHPR 209
            KHHPR
Sbjct: 1360 KHHPR 1364

The following BLAST results are available for this feature:
BLAST of MELO3C008643 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHR20_ARATH6.1e-6671.66Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana GN=ATRX PE=2 SV=2[more]
ATRX_PONPY1.6e-3754.42Transcriptional regulator ATRX OS=Pongo pygmaeus GN=ATRX PE=2 SV=1[more]
ATRX_PANTR1.6e-3754.42Transcriptional regulator ATRX OS=Pan troglodytes GN=ATRX PE=2 SV=1[more]
ATRX_HUMAN1.6e-3754.42Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5[more]
ATRX_MOUSE1.6e-3758.91Transcriptional regulator ATRX OS=Mus musculus GN=Atrx PE=1 SV=3[more]
BLAST of MELO3C008643 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJN1_CUCSA9.0e-10198.38Uncharacterized protein OS=Cucumis sativus GN=Csa_2G076015 PE=4 SV=1[more]
A0A061F1R3_THECC6.1e-8182.16Chromatin remodeling complex subunit isoform 1 OS=Theobroma cacao GN=TCM_026141 ... [more]
A5C3T6_VITVI1.0e-8081.62Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027610 PE=4 SV=1[more]
E0CU60_VITVI1.0e-8081.62Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g01460 PE=4 SV=... [more]
A0A067JW49_JATCU1.5e-7980.54Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23567 PE=4 SV=1[more]
BLAST of MELO3C008643 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G08600.33.4e-6771.66 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT3G19210.11.6e-2741.04 homolog of RAD54[more]
AT2G18760.12.7e-2442.34 chromatin remodeling 8[more]
AT1G03750.11.2e-2250.00 switch 2[more]
AT5G63950.12.0e-2239.04 chromatin remodeling 24[more]
BLAST of MELO3C008643 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082341|ref|XP_008441788.1|5.3e-102100.00PREDICTED: transcriptional regulator ATRX isoform X5 [Cucumis melo][more]
gi|659082337|ref|XP_008441786.1|5.3e-102100.00PREDICTED: transcriptional regulator ATRX isoform X4 [Cucumis melo][more]
gi|659082335|ref|XP_008441785.1|5.3e-102100.00PREDICTED: transcriptional regulator ATRX isoform X3 [Cucumis melo][more]
gi|659082333|ref|XP_008441784.1|5.3e-102100.00PREDICTED: transcriptional regulator ATRX isoform X2 [Cucumis melo][more]
gi|659082329|ref|XP_008441780.1|5.3e-102100.00PREDICTED: transcriptional regulator ATRX isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008643T1MELO3C008643T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 20..94
score: 2.6
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 9..94
score: 5.2
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 1..142
score: 14
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 23..117
score: 4.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 23..154
score: 9.67
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 24..156
score: 4.2
NoneNo IPR availablePANTHERPTHR10799:SF350TRANSCRIPTIONAL REGULATOR ATRX HOMOLOGcoord: 24..156
score: 4.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008643Cucumber (Chinese Long) v3cucmeB144
MELO3C008643Watermelon (97103) v2mewmbB372
MELO3C008643Wax gourdmewgoB458
MELO3C008643Cucumber (Gy14) v1cgymeB321
MELO3C008643Cucurbita maxima (Rimu)cmameB178
MELO3C008643Cucurbita maxima (Rimu)cmameB739
MELO3C008643Cucurbita moschata (Rifu)cmomeB167
MELO3C008643Cucurbita moschata (Rifu)cmomeB726
MELO3C008643Wild cucumber (PI 183967)cpimeB142
MELO3C008643Cucumber (Chinese Long) v2cumeB137
MELO3C008643Watermelon (Charleston Gray)mewcgB369
MELO3C008643Watermelon (97103) v1mewmB428
MELO3C008643Cucurbita pepo (Zucchini)cpemeB106
MELO3C008643Cucurbita pepo (Zucchini)cpemeB780
MELO3C008643Bottle gourd (USVL1VR-Ls)lsimeB117
MELO3C008643Cucumber (Gy14) v2cgybmeB125
MELO3C008643Silver-seed gourdcarmeB0487