MELO3C008584.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C008584.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionAldo/keto reductase family protein
Locationchr05 : 13787851 .. 13788393 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCGATCACTCACCGGAGCTTCTCGAACCTCACTTCCTTTAAATCCTTCACAGCTGAGACAAGAAGACATTATGAAAGGAGAAAGCTTGGAGCTAAAAGCTCTATTAAGTGCTCTCAGACATTGGAAGGGTTCACCCAAACTGTTATGGTGTCAAATAGTAAGGATTTATTAGAATTTTGTCGAGTCCTCAATGGAATGTGGCAGACTAGTGGTGGATGGAGGAGAATTAACCGTGACACCACGGTGGAGGCAATGCTCCGATATGTCGACATCGGACTTATAACCTTTGATATGGCCGACCACTATTCTGAAGCATTTCTGCACCGATTAGGTCTACACCTTCTCAACATGGCACTAATGACGCTTCGGTTGTTGATGAAGAAATTAATTCTTTTTCCCCAGATCATCTCCCTCTTCAATCTGAATCTGAATCACTTGGAGGTGTTCATGATTCTCAGGGAGCTTCCAACTCCATCGATGTCGATGAACTCGCTTGTTTTGCTATCGTGGAACACAACAAAGAAGAGTCGCAGTTGA

mRNA sequence

ATGGAAGCGATCACTCACCGGAGCTTCTCGAACCTCACTTCCTTTAAATCCTTCACAGCTGAGACAAGAAGACATTATGAAAGGAGAAAGCTTGGAGCTAAAAGCTCTATTAAGTGCTCTCAGACATTGGAAGGGTTCACCCAAACTGTTATGGTGTCAAATAGTAAGGATTTATTAGAATTTTGTCGAGTCCTCAATGGAATGTGGCAGACTAGTGGTGGATGGAGGAGAATTAACCGTGACACCACGGTGGAGGCAATGCTCCGATATGTCGACATCGGACTTATAACCTTTGATATGGCCGACCACTATTCTGAAGCATTTCTGCACCGATTAGGTCTACACCTTCTCAACATGGCACTAATGACGCTTCGGTTGTTGATGAAGAAATTAATTCTTTTTCCCCAGATCATCTCCCTCTTCAATCTGAATCTGAATCACTTGGAGGTGTTCATGATTCTCAGGGAGCTTCCAACTCCATCGATGTCGATGAACTCGCTTGTTTTGCTATCGTGGAACACAACAAAGAAGAGTCGCAGTTGA

Coding sequence (CDS)

ATGGAAGCGATCACTCACCGGAGCTTCTCGAACCTCACTTCCTTTAAATCCTTCACAGCTGAGACAAGAAGACATTATGAAAGGAGAAAGCTTGGAGCTAAAAGCTCTATTAAGTGCTCTCAGACATTGGAAGGGTTCACCCAAACTGTTATGGTGTCAAATAGTAAGGATTTATTAGAATTTTGTCGAGTCCTCAATGGAATGTGGCAGACTAGTGGTGGATGGAGGAGAATTAACCGTGACACCACGGTGGAGGCAATGCTCCGATATGTCGACATCGGACTTATAACCTTTGATATGGCCGACCACTATTCTGAAGCATTTCTGCACCGATTAGGTCTACACCTTCTCAACATGGCACTAATGACGCTTCGGTTGTTGATGAAGAAATTAATTCTTTTTCCCCAGATCATCTCCCTCTTCAATCTGAATCTGAATCACTTGGAGGTGTTCATGATTCTCAGGGAGCTTCCAACTCCATCGATGTCGATGAACTCGCTTGTTTTGCTATCGTGGAACACAACAAAGAAGAGTCGCAGTTGA

Protein sequence

MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLEFCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEAFLHRLGLHLLNMALMTLRLLMKKLILFPQIISLFNLNLNHLEVFMILRELPTPSMSMNSLVLLSWNTTKKSRS
Homology
[Close]
BLAST of MELO3C008584.2 vs. NCBI nr
Match: XP_008458596.1 (PREDICTED: flagellar radial spoke protein 5 isoform X3 [Cucumis melo])

HSP 1 Score: 174.5 bits (441), Expect = 3.3e-40
Identity = 85/107 (79.44%), Postives = 88/107 (82.24%), Query Frame = 0 

Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLE 60
           M  ITHRSF NLT+FKSFTAETRR YERRKLGAKSS+ CSQTLEG  QTV VSN KD LE
Sbjct: 1   MATITHRSFLNLTAFKSFTAETRRRYERRKLGAKSSVNCSQTLEGSAQTVAVSNGKDSLE 60

Query: 61  FCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
            CRVLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADHY  A
Sbjct: 61  ICRVLNGMWQTSGGWGRIDRDAAVEAMLRYADAGLTTFDMADHYGPA 107

[Close]
BLAST of MELO3C008584.2 vs. NCBI nr
Match: XP_016902264.1 (PREDICTED: flagellar radial spoke protein 5 isoform X1 [Cucumis melo])

HSP 1 Score: 174.5 bits (441), Expect = 3.3e-40
Identity = 85/107 (79.44%), Postives = 88/107 (82.24%), Query Frame = 0 

Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLE 60
           M  ITHRSF NLT+FKSFTAETRR YERRKLGAKSS+ CSQTLEG  QTV VSN KD LE
Sbjct: 1   MATITHRSFLNLTAFKSFTAETRRRYERRKLGAKSSVNCSQTLEGSAQTVAVSNGKDSLE 60

Query: 61  FCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
            CRVLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADHY  A
Sbjct: 61  ICRVLNGMWQTSGGWGRIDRDAAVEAMLRYADAGLTTFDMADHYGPA 107

[Close]
BLAST of MELO3C008584.2 vs. NCBI nr
Match: XP_004145800.1 (PREDICTED: flagellar radial spoke protein 5 isoform X1 [Cucumis sativus] >KGN46941.1 hypothetical protein Csa_6G151780 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 3.1e-38
Identity = 84/108 (77.78%), Postives = 88/108 (81.48%), Query Frame = 0 

Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTV-MVSNSKDLL 60
           M AITHR+F NLT+FKSFTAETRR YER KLG KSS+KCSQTLEG  QTV  VSN KD L
Sbjct: 1   MAAITHRTFLNLTAFKSFTAETRRRYERTKLGTKSSVKCSQTLEGSAQTVTTVSNGKDSL 60

Query: 61  EFCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
           E CRVLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADHY  A
Sbjct: 61  EICRVLNGMWQTSGGWGRIDRDDAVEAMLRYADAGLTTFDMADHYGPA 108

[Close]
BLAST of MELO3C008584.2 vs. NCBI nr
Match: XP_023513304.1 (flagellar radial spoke protein 5 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.3 bits (412), Expect = 7.6e-37
Identity = 81/107 (75.70%), Postives = 85/107 (79.44%), Query Frame = 0 

Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLE 60
           M AIT RSF NLT+ KSFTAETR  YERRKLGA SS+KCSQTLEG  Q+V VSN KD L 
Sbjct: 25  MAAITQRSFLNLTALKSFTAETRTRYERRKLGANSSVKCSQTLEGSAQSVTVSNGKDSLV 84

Query: 61  FCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
            CRVLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADHY  A
Sbjct: 85  ICRVLNGMWQTSGGWGRIDRDDAVEAMLRYADAGLSTFDMADHYGPA 131

[Close]
BLAST of MELO3C008584.2 vs. NCBI nr
Match: XP_022985985.1 (flagellar radial spoke protein 5 isoform X2 [Cucurbita maxima])

HSP 1 Score: 161.0 bits (406), Expect = 3.8e-36
Identity = 79/107 (73.83%), Postives = 85/107 (79.44%), Query Frame = 0 

Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLE 60
           M AIT RSF NLT+ KSFTAETR  YERRKLGA SS+KCSQTLEG  Q+V VSN KD L 
Sbjct: 1   MAAITQRSFLNLTALKSFTAETRTRYERRKLGANSSVKCSQTLEGSAQSVTVSNGKDSLV 60

Query: 61  FCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
            CRVLNGMWQTSGGW RI+RD  V++MLRY D GL TFDMADHY  A
Sbjct: 61  ICRVLNGMWQTSGGWGRIDRDDAVDSMLRYADAGLSTFDMADHYGPA 107

[Close]
BLAST of MELO3C008584.2 vs. TAIR10
Match: AT2G27680.1 (NAD(P)-linked oxidoreductase superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-19
Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 0 

Query: 13  TSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLEFCRVLNGMWQTS 72
           T+  +  +   R+  RR+    +S+ CS  +    ++V + N  D LE CRVLNGMWQTS
Sbjct: 11  TNLATTLSSNYRNVSRRRT-ISTSVNCSVEITEADRSVKLKNGNDSLEICRVLNGMWQTS 70

Query: 73  GGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
           GGW +I+R+  V++MLRY D GL TFDMADHY  A
Sbjct: 71  GGWGKIDRNDAVDSMLRYADAGLSTFDMADHYGPA 104

[Close]
BLAST of MELO3C008584.2 vs. TrEMBL
Match: tr|A0A1S4E206|A0A1S4E206_CUCME (flagellar radial spoke protein 5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497952 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.2e-40
Identity = 85/107 (79.44%), Postives = 88/107 (82.24%), Query Frame = 0 

Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLE 60
           M  ITHRSF NLT+FKSFTAETRR YERRKLGAKSS+ CSQTLEG  QTV VSN KD LE
Sbjct: 1   MATITHRSFLNLTAFKSFTAETRRRYERRKLGAKSSVNCSQTLEGSAQTVAVSNGKDSLE 60

Query: 61  FCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
            CRVLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADHY  A
Sbjct: 61  ICRVLNGMWQTSGGWGRIDRDAAVEAMLRYADAGLTTFDMADHYGPA 107

[Close]
BLAST of MELO3C008584.2 vs. TrEMBL
Match: tr|A0A1S3C7R4|A0A1S3C7R4_CUCME (flagellar radial spoke protein 5 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497952 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.2e-40
Identity = 85/107 (79.44%), Postives = 88/107 (82.24%), Query Frame = 0 

Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLE 60
           M  ITHRSF NLT+FKSFTAETRR YERRKLGAKSS+ CSQTLEG  QTV VSN KD LE
Sbjct: 1   MATITHRSFLNLTAFKSFTAETRRRYERRKLGAKSSVNCSQTLEGSAQTVAVSNGKDSLE 60

Query: 61  FCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
            CRVLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADHY  A
Sbjct: 61  ICRVLNGMWQTSGGWGRIDRDAAVEAMLRYADAGLTTFDMADHYGPA 107

[Close]
BLAST of MELO3C008584.2 vs. TrEMBL
Match: tr|A0A0A0KGQ2|A0A0A0KGQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151780 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.0e-38
Identity = 84/108 (77.78%), Postives = 88/108 (81.48%), Query Frame = 0 

Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTV-MVSNSKDLL 60
           M AITHR+F NLT+FKSFTAETRR YER KLG KSS+KCSQTLEG  QTV  VSN KD L
Sbjct: 1   MAAITHRTFLNLTAFKSFTAETRRRYERTKLGTKSSVKCSQTLEGSAQTVTTVSNGKDSL 60

Query: 61  EFCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
           E CRVLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADHY  A
Sbjct: 61  EICRVLNGMWQTSGGWGRIDRDDAVEAMLRYADAGLTTFDMADHYGPA 108

[Close]
BLAST of MELO3C008584.2 vs. TrEMBL
Match: tr|A0A1U7ZAH9|A0A1U7ZAH9_NELNU (flagellar radial spoke protein 5 isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC104588073 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.2e-24
Identity = 64/107 (59.81%), Postives = 72/107 (67.29%), Query Frame = 0 

Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLE 60
           M A  H    NL++FKS  A+TR   E RKLG K S++C QT+    +   V NS D LE
Sbjct: 1   MAASAHHLLCNLSTFKSTKAKTRFRNESRKLGRK-SLRCEQTVVD-NRRATVKNSNDSLE 60

Query: 61  FCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
            CRVLNGMWQTSGGW RINRD  VEAML+Y D GL TFDMADHY  A
Sbjct: 61  ICRVLNGMWQTSGGWGRINRDDAVEAMLQYADAGLSTFDMADHYGPA 105

[Close]
BLAST of MELO3C008584.2 vs. TrEMBL
Match: tr|V7BYH2|V7BYH2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G125800g PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 5.1e-21
Identity = 59/103 (57.28%), Postives = 71/103 (68.93%), Query Frame = 0 

Query: 6   HRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCS--QTLEGFTQTVMVSNSKDLLEFCR 65
           HR FS  T  KS T ++R    RR++GA +S++C+   T     + V VSN KD LE CR
Sbjct: 9   HRIFSTTTRLKSATRDSR----RRRIGA-NSVRCADVSTATSENRRVTVSNRKDSLEICR 68

Query: 66  VLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSE 107
           VLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADH ++
Sbjct: 69  VLNGMWQTSGGWGRIDRDDAVEAMLRYADAGLSTFDMADHSNQ 106

The following BLAST results are available for this feature:
BLAST of MELO3C008584.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458596.13.3e-4079.44PREDICTED: flagellar radial spoke protein 5 isoform X3 [Cucumis melo][more]
XP_016902264.13.3e-4079.44PREDICTED: flagellar radial spoke protein 5 isoform X1 [Cucumis melo][more]
XP_004145800.13.1e-3877.78PREDICTED: flagellar radial spoke protein 5 isoform X1 [Cucumis sativus] >KGN469... [more]
XP_023513304.17.6e-3775.70flagellar radial spoke protein 5 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022985985.13.8e-3673.83flagellar radial spoke protein 5 isoform X2 [Cucurbita maxima][more]
BLAST of MELO3C008584.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27680.11.0e-1947.37NAD(P)-linked oxidoreductase superfamily protein[more]
BLAST of MELO3C008584.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C008584.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E206|A0A1S4E206_CUCME2.2e-4079.44flagellar radial spoke protein 5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497... [more]
tr|A0A1S3C7R4|A0A1S3C7R4_CUCME2.2e-4079.44flagellar radial spoke protein 5 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497... [more]
tr|A0A0A0KGQ2|A0A0A0KGQ2_CUCSA2.0e-3877.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151780 PE=4 SV=1[more]
tr|A0A1U7ZAH9|A0A1U7ZAH9_NELNU2.2e-2459.81flagellar radial spoke protein 5 isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC10... [more]
tr|V7BYH2|V7BYH2_PHAVU5.1e-2157.28Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G125800g PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036812NADP_OxRdtase_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009505 plant-type cell wall
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008584.2.1MELO3C008584.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR43147FAMILY NOT NAMEDcoord: 45..107
NoneNo IPR availablePANTHERPTHR43147:SF1PROTEIN TAScoord: 45..107
IPR036812NADP-dependent oxidoreductase domain superfamilySUPERFAMILYSSF51430NAD(P)-linked oxidoreductasecoord: 62..106

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008584.2Cucumber (Gy14) v2cgybmedB122
MELO3C008584.2Cucumber (Gy14) v1cgymedB340
MELO3C008584.2Cucurbita maxima (Rimu)cmamedB833
MELO3C008584.2Cucurbita moschata (Rifu)cmomedB823
MELO3C008584.2Cucurbita pepo (Zucchini)cpemedB125
MELO3C008584.2Wild cucumber (PI 183967)cpimedB135
MELO3C008584.2Cucumber (Chinese Long) v2cumedB135
MELO3C008584.2Bottle gourd (USVL1VR-Ls)lsimedB125
MELO3C008584.2Watermelon (Charleston Gray)medwcgB366
MELO3C008584.2Silver-seed gourdcarmedB0245
MELO3C008584.2Cucumber (Chinese Long) v3cucmedB137
MELO3C008584.2Watermelon (97103) v2medwmbB366
MELO3C008584.2Wax gourdmedwgoB458