MELO3C008584 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008584
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Aldo/keto reductase family oxidoreductase
Location	chr5 : 13775108 .. 13775650 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCGATCACTCACCGGAGCTTCTCGAACCTCACTTCCTTTAAATCCTTCACAGCTGAGACAAGAAGACATTATGAAAGGAGAAAGCTTGGAGCTAAAAGCTCTATTAAGTGCTCTCAGACATTGGAAGGGTTCACCCAAACTGTTATGGTGTCAAATAGTAAGGATTTATTAGAATTTTGTCGAGTCCTCAATGGAATGTGGCAGACTAGTGGTGGATGGAGGAGAATTAACCGTGACACCACGGTGGAGGCAATGCTCCGATATGTCGACATCGGACTTATAACCTTTGATATGGCCGACCACTATTCTGAAGCATTTCTGCACCGATTAGGTCTACACCTTCTCAACATGGCACTAATGACGCTTCGGTTGTTGATGAAGAAATTAATTCTTTTTCCCCAGATCATCTCCCTCTTCAATCTGAATCTGAATCACTTGGAGGTGTTCATGATTCTCAGGGAGCTTCCAACTCCATCGATGTCGATGAACTCGCTTGTTTTGCTATCGTGGAACACAACAAAGAAGAGTCGCAGTTGA

mRNA sequence

ATGGAAGCGATCACTCACCGGAGCTTCTCGAACCTCACTTCCTTTAAATCCTTCACAGCTGAGACAAGAAGACATTATGAAAGGAGAAAGCTTGGAGCTAAAAGCTCTATTAAGTGCTCTCAGACATTGGAAGGGTTCACCCAAACTGTTATGGTGTCAAATAGTAAGGATTTATTAGAATTTTGTCGAGTCCTCAATGGAATGTGGCAGACTAGTGGTGGATGGAGGAGAATTAACCGTGACACCACGGTGGAGGCAATGCTCCGATATGTCGACATCGGACTTATAACCTTTGATATGGCCGACCACTATTCTGAAGCATTTCTGCACCGATTAGGTCTACACCTTCTCAACATGGCACTAATGACGCTTCGGTTGTTGATGAAGAAATTAATTCTTTTTCCCCAGATCATCTCCCTCTTCAATCTGAATCTGAATCACTTGGAGGTGTTCATGATTCTCAGGGAGCTTCCAACTCCATCGATGTCGATGAACTCGCTTGTTTTGCTATCGTGGAACACAACAAAGAAGAGTCGCAGTTGA

Coding sequence (CDS)

ATGGAAGCGATCACTCACCGGAGCTTCTCGAACCTCACTTCCTTTAAATCCTTCACAGCTGAGACAAGAAGACATTATGAAAGGAGAAAGCTTGGAGCTAAAAGCTCTATTAAGTGCTCTCAGACATTGGAAGGGTTCACCCAAACTGTTATGGTGTCAAATAGTAAGGATTTATTAGAATTTTGTCGAGTCCTCAATGGAATGTGGCAGACTAGTGGTGGATGGAGGAGAATTAACCGTGACACCACGGTGGAGGCAATGCTCCGATATGTCGACATCGGACTTATAACCTTTGATATGGCCGACCACTATTCTGAAGCATTTCTGCACCGATTAGGTCTACACCTTCTCAACATGGCACTAATGACGCTTCGGTTGTTGATGAAGAAATTAATTCTTTTTCCCCAGATCATCTCCCTCTTCAATCTGAATCTGAATCACTTGGAGGTGTTCATGATTCTCAGGGAGCTTCCAACTCCATCGATGTCGATGAACTCGCTTGTTTTGCTATCGTGGAACACAACAAAGAAGAGTCGCAGTTGA

Protein sequence

MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLEFCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEAFLHRLGLHLLNMALMTLRLLMKKLILFPQIISLFNLNLNHLEVFMILRELPTPSMSMNSLVLLSWNTTKKSRS*

Homology

[Close]

BLAST of MELO3C008584 vs. TrEMBL
Match: A0A0A0KGQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G151780 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.5e-39
Identity = 84/108 (77.78%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVM-VSNSKDLL 60
           M AITHR+F NLT+FKSFTAETRR YER KLG KSS+KCSQTLEG  QTV  VSN KD L
Sbjct: 1   MAAITHRTFLNLTAFKSFTAETRRRYERTKLGTKSSVKCSQTLEGSAQTVTTVSNGKDSL 60

Query: 61  EFCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
           E CRVLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADHY  A
Sbjct: 61  EICRVLNGMWQTSGGWGRIDRDDAVEAMLRYADAGLTTFDMADHYGPA 108

[Close]

BLAST of MELO3C008584 vs. TrEMBL
Match: V7BYH2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G125800g PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.8e-21
Identity = 59/103 (57.28%), Postives = 71/103 (68.93%), Query Frame = 1


Query: 6   HRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQ--TLEGFTQTVMVSNSKDLLEFCR 65
           HR FS  T  KS T ++RR    R++GA +S++C+   T     + V VSN KD LE CR
Sbjct: 9   HRIFSTTTRLKSATRDSRR----RRIGA-NSVRCADVSTATSENRRVTVSNRKDSLEICR 68

Query: 66  VLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSE 107
           VLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADH ++
Sbjct: 69  VLNGMWQTSGGWGRIDRDDAVEAMLRYADAGLSTFDMADHSNQ 106

[Close]

BLAST of MELO3C008584 vs. TrEMBL
Match: V7BYH2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G125800g PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.6e-13
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 1


Query: 48  QTVMVSNSKDLLEFCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 107
           ++ +V N  D L+ CRV+NGMWQTSGGW RI+RD  V+AML+Y D GL TFDMAD Y  A
Sbjct: 525 RSTVVKNGNDSLDICRVVNGMWQTSGGWGRIDRDNAVDAMLKYADAGLTTFDMADIYGPA 584

HSP 2 Score: 109.0 bits (271), Expect = 6.1e-21
Identity = 60/104 (57.69%), Postives = 68/104 (65.38%), Query Frame = 1


Query: 6   HRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQ--TLEGFTQTVMVSNSKDLLEFCR 65
           HR FS  T F S    T R   R++ GA +S++C+   T+    Q V VSN  D LE CR
Sbjct: 9   HRLFSAATRFNS----TGRDSRRQRSGA-NSVRCADVSTVTSENQRVTVSNRSDSLEICR 68

Query: 66  VLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
           VLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADHY  A
Sbjct: 69  VLNGMWQTSGGWGRIDRDDAVEAMLRYADAGLTTFDMADHYGPA 107

[Close]

BLAST of MELO3C008584 vs. TrEMBL
Match: A0A067E7Z8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014906mg PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-20
Identity = 55/107 (51.40%), Postives = 68/107 (63.55%), Query Frame = 1


Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLE 60
           M    H +  +L + KS +   R   E R++ A +S++C Q      Q++ VSN  D LE
Sbjct: 33  MAVTIHNALPSLNALKSKSI-IRNRPESRRVSA-NSVRCCQVATSDKQSITVSNGNDSLE 92

Query: 61  FCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
            CRVLNGMWQTSGGW RI+RD  V+AMLRY D GL TFDMADHY  A
Sbjct: 93  ICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPA 137

[Close]

BLAST of MELO3C008584 vs. TrEMBL
Match: A0A067EBR1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014906mg PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-20
Identity = 55/107 (51.40%), Postives = 68/107 (63.55%), Query Frame = 1


Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLE 60
           M    H +  +L + KS +   R   E R++ A +S++C Q      Q++ VSN  D LE
Sbjct: 33  MAVTIHNALPSLNALKSKSI-IRNRPESRRVSA-NSVRCCQVATSDKQSITVSNGNDSLE 92

Query: 61  FCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
            CRVLNGMWQTSGGW RI+RD  V+AMLRY D GL TFDMADHY  A
Sbjct: 93  ICRVLNGMWQTSGGWGRIDRDDAVDAMLRYADAGLTTFDMADHYGPA 137

[Close]

BLAST of MELO3C008584 vs. TAIR10
Match: AT2G27680.1 (AT2G27680.1 NAD(P)-linked oxidoreductase superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-19
Identity = 45/95 (47.37%), Postives = 59/95 (62.11%), Query Frame = 1


Query: 13  TSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLEFCRVLNGMWQTS 72
           T+  +  +   R+  RR+    +S+ CS  +    ++V + N  D LE CRVLNGMWQTS
Sbjct: 11  TNLATTLSSNYRNVSRRRT-ISTSVNCSVEITEADRSVKLKNGNDSLEICRVLNGMWQTS 70

Query: 73  GGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
           GGW +I+R+  V++MLRY D GL TFDMADHY  A
Sbjct: 71  GGWGKIDRNDAVDSMLRYADAGLSTFDMADHYGPA 104

[Close]

BLAST of MELO3C008584 vs. NCBI nr
Match: gi|659117427|ref|XP_008458596.1| (PREDICTED: putative aryl-alcohol dehydrogenase C750.01 isoform X1 [Cucumis melo])

HSP 1 Score: 174.9 bits (442), Expect = 1.3e-40
Identity = 85/107 (79.44%), Postives = 88/107 (82.24%), Query Frame = 1


Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLE 60
           M  ITHRSF NLT+FKSFTAETRR YERRKLGAKSS+ CSQTLEG  QTV VSN KD LE
Sbjct: 1   MATITHRSFLNLTAFKSFTAETRRRYERRKLGAKSSVNCSQTLEGSAQTVAVSNGKDSLE 60

Query: 61  FCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
            CRVLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADHY  A
Sbjct: 61  ICRVLNGMWQTSGGWGRIDRDAAVEAMLRYADAGLTTFDMADHYGPA 107

[Close]

BLAST of MELO3C008584 vs. NCBI nr
Match: gi|449456124|ref|XP_004145800.1| (PREDICTED: flagellar radial spoke protein 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 1.2e-38
Identity = 84/108 (77.78%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVM-VSNSKDLL 60
           M AITHR+F NLT+FKSFTAETRR YER KLG KSS+KCSQTLEG  QTV  VSN KD L
Sbjct: 1   MAAITHRTFLNLTAFKSFTAETRRRYERTKLGTKSSVKCSQTLEGSAQTVTTVSNGKDSL 60

Query: 61  EFCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
           E CRVLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADHY  A
Sbjct: 61  EICRVLNGMWQTSGGWGRIDRDDAVEAMLRYADAGLTTFDMADHYGPA 108

[Close]

BLAST of MELO3C008584 vs. NCBI nr
Match: gi|719974177|ref|XP_010244190.1| (PREDICTED: norsolorinic acid reductase B isoform X1 [Nelumbo nucifera])

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-24
Identity = 64/107 (59.81%), Postives = 72/107 (67.29%), Query Frame = 1


Query: 1   MEAITHRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQTLEGFTQTVMVSNSKDLLE 60
           M A  H    NL++FKS  A+TR   E RKLG KS ++C QT+    +   V NS D LE
Sbjct: 1   MAASAHHLLCNLSTFKSTKAKTRFRNESRKLGRKS-LRCEQTVVD-NRRATVKNSNDSLE 60

Query: 61  FCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
            CRVLNGMWQTSGGW RINRD  VEAML+Y D GL TFDMADHY  A
Sbjct: 61  ICRVLNGMWQTSGGWGRINRDDAVEAMLQYADAGLSTFDMADHYGPA 105

[Close]

BLAST of MELO3C008584 vs. NCBI nr
Match: gi|593699252|ref|XP_007150091.1| (hypothetical protein PHAVU_005G125800g [Phaseolus vulgaris])

HSP 1 Score: 110.2 bits (274), Expect = 3.9e-21
Identity = 59/103 (57.28%), Postives = 71/103 (68.93%), Query Frame = 1


Query: 6   HRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQ--TLEGFTQTVMVSNSKDLLEFCR 65
           HR FS  T  KS T ++RR    R++GA +S++C+   T     + V VSN KD LE CR
Sbjct: 9   HRIFSTTTRLKSATRDSRR----RRIGA-NSVRCADVSTATSENRRVTVSNRKDSLEICR 68

Query: 66  VLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSE 107
           VLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADH ++
Sbjct: 69  VLNGMWQTSGGWGRIDRDDAVEAMLRYADAGLSTFDMADHSNQ 106

[Close]

BLAST of MELO3C008584 vs. NCBI nr
Match: gi|593699252|ref|XP_007150091.1| (hypothetical protein PHAVU_005G125800g [Phaseolus vulgaris])

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 1


Query: 48  QTVMVSNSKDLLEFCRVLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 107
           ++ +V N  D L+ CRV+NGMWQTSGGW RI+RD  V+AML+Y D GL TFDMAD Y  A
Sbjct: 525 RSTVVKNGNDSLDICRVVNGMWQTSGGWGRIDRDNAVDAMLKYADAGLTTFDMADIYGPA 584

HSP 2 Score: 109.0 bits (271), Expect = 8.8e-21
Identity = 60/104 (57.69%), Postives = 68/104 (65.38%), Query Frame = 1


Query: 6   HRSFSNLTSFKSFTAETRRHYERRKLGAKSSIKCSQ--TLEGFTQTVMVSNSKDLLEFCR 65
           HR FS  T F S    T R   R++ GA +S++C+   T+    Q V VSN  D LE CR
Sbjct: 9   HRLFSAATRFNS----TGRDSRRQRSGA-NSVRCADVSTVTSENQRVTVSNRSDSLEICR 68

Query: 66  VLNGMWQTSGGWRRINRDTTVEAMLRYVDIGLITFDMADHYSEA 108
           VLNGMWQTSGGW RI+RD  VEAMLRY D GL TFDMADHY  A
Sbjct: 69  VLNGMWQTSGGWGRIDRDDAVEAMLRYADAGLTTFDMADHYGPA 107

The following BLAST results are available for this feature:

BLAST of MELO3C008584 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGQ2_CUCSA	8.5e-39	77.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G151780 PE=4 SV=1	[more]
V7BYH2_PHAVU	2.8e-21	57.28	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G125800g PE=4 SV=1	[more]
V7BYH2_PHAVU	1.6e-13	61.67	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G125800g PE=4 SV=1	[more]
A0A067E7Z8_CITSI	1.8e-20	51.40	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014906mg PE=4 SV=1	[more]
A0A067EBR1_CITSI	1.8e-20	51.40	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014906mg PE=4 SV=1	[more]

BLAST of MELO3C008584 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27680.1	1.0e-19	47.37	NAD(P)-linked oxidoreductase superfamily protein	[more]

BLAST of MELO3C008584 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117427\|ref\|XP_008458596.1\|	1.3e-40	79.44	PREDICTED: putative aryl-alcohol dehydrogenase C750.01 isoform X1 [Cucumis melo]	[more]
gi\|449456124\|ref\|XP_004145800.1\|	1.2e-38	77.78	PREDICTED: flagellar radial spoke protein 5 isoform X1 [Cucumis sativus]	[more]
gi\|719974177\|ref\|XP_010244190.1\|	1.7e-24	59.81	PREDICTED: norsolorinic acid reductase B isoform X1 [Nelumbo nucifera]	[more]
gi\|593699252\|ref\|XP_007150091.1\|	3.9e-21	57.28	hypothetical protein PHAVU_005G125800g [Phaseolus vulgaris]	[more]
gi\|593699252\|ref\|XP_007150091.1\|	2.3e-13	61.67	hypothetical protein PHAVU_005G125800g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001395	Aldo/keto reductase/potassium channel subunit beta
IPR023210	NADP_OxRdtase_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008584T1	MELO3C008584T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001395	Aldo/keto reductase/potassium channel subunit beta	PANTHER	PTHR11732	ALDO/KETO REDUCTASE	coord: 49..104 score: 4.3
IPR023210	NADP-dependent oxidoreductase domain	GENE3D	G3DSA:3.20.20.100		coord: 59..106 score: 2.
IPR023210	NADP-dependent oxidoreductase domain	unknown	SSF51430	NAD(P)-linked oxidoreductase	coord: 62..106 score: 1.
None	No IPR available	PANTHER	PTHR11732:SF7	SUBFAMILY NOT NAMED	coord: 49..104 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C008584	Silver-seed gourd	carmeB0237
MELO3C008584	Cucumber (Chinese Long) v3	cucmeB144
MELO3C008584	Watermelon (97103) v2	mewmbB374
MELO3C008584	Wax gourd	mewgoB455
MELO3C008584	Cucumber (Gy14) v1	cgymeB345
MELO3C008584	Cucurbita maxima (Rimu)	cmameB739
MELO3C008584	Cucurbita moschata (Rifu)	cmomeB726
MELO3C008584	Wild cucumber (PI 183967)	cpimeB142
MELO3C008584	Cucumber (Chinese Long) v2	cumeB132
MELO3C008584	Watermelon (Charleston Gray)	mewcgB371
MELO3C008584	Watermelon (97103) v1	mewmB429
MELO3C008584	Cucurbita pepo (Zucchini)	cpemeB101
MELO3C008584	Bottle gourd (USVL1VR-Ls)	lsimeB117
MELO3C008584	Cucumber (Gy14) v2	cgybmeB124