MELO3C008509 (gene) Melon (DHL92) v3.5.1

NameMELO3C008509
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionATP citrate lyase subunit B 2
Locationchr5 : 11419482 .. 11419901 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGCCAAAAGATATCTTCATTTTGATTTGAAAGCACCAAGAACGAGGTGTTCTAAGAAGGGCTTAAAATCTCCTTCAAGAGGGTTACAAACGAGTGAGAATGACTATTATGTCAAAGCGAGTGAAAAAGAAAGAGCTACCCTCACAATACCTGAAATTGAGCCACCGAATGATGGAGACAATCTTGATGGTACCCACACAACTCCGAGTTCACCTGTATCATTTGATTCACTAGCATCTCGTACAAGAGGAGCTCTTCAAAAGTTAGCTTTTAGAGGTCAAGTTTCACCAATTGTAGAGGTATCGCAAGAAGTAGGTGAGGATATAAATGAAGCTAAACCAAACGACACAACTCCGAGTTCACCTGTACCCACACAACTCCCAAAAAAAAAAAGCGTAAAGGTCCTACAAAGATGA

mRNA sequence

ATGGGTGCCAAAAGATATCTTCATTTTGATTTGAAAGCACCAAGAACGAGGTGTTCTAAGAAGGGCTTAAAATCTCCTTCAAGAGGGTTACAAACGAGTGAGAATGACTATTATGTCAAAGCGAGTGAAAAAGAAAGAGCTACCCTCACAATACCTGAAATTGAGCCACCGAATGATGGAGACAATCTTGATGGTACCCACACAACTCCGAGTTCACCTGTATCATTTGATTCACTAGCATCTCGTACAAGAGGAGCTCTTCAAAAGTTAGCTTTTAGAGGTCAAGTTTCACCAATTGTAGAGGTATCGCAAGAAGTAGGTGAGGATATAAATGAAGCTAAACCAAACGACACAACTCCGAGTTCACCTGTACCCACACAACTCCCAAAAAAAAAAAGCGTAAAGGTCCTACAAAGATGA

Coding sequence (CDS)

ATGGGTGCCAAAAGATATCTTCATTTTGATTTGAAAGCACCAAGAACGAGGTGTTCTAAGAAGGGCTTAAAATCTCCTTCAAGAGGGTTACAAACGAGTGAGAATGACTATTATGTCAAAGCGAGTGAAAAAGAAAGAGCTACCCTCACAATACCTGAAATTGAGCCACCGAATGATGGAGACAATCTTGATGGTACCCACACAACTCCGAGTTCACCTGTATCATTTGATTCACTAGCATCTCGTACAAGAGGAGCTCTTCAAAAGTTAGCTTTTAGAGGTCAAGTTTCACCAATTGTAGAGGTATCGCAAGAAGTAGGTGAGGATATAAATGAAGCTAAACCAAACGACACAACTCCGAGTTCACCTGTACCCACACAACTCCCAAAAAAAAAAAGCGTAAAGGTCCTACAAAGATGA

Protein sequence

MGAKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSENDYYVKASEKERATLTIPEIEPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPIVEVSQEVGEDINEAKPNDTTPSSPVPTQLPKKKSVKVLQR*
BLAST of MELO3C008509 vs. TrEMBL
Match: E5GCG1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 5.0e-47
Identity = 101/125 (80.80%), Postives = 106/125 (84.80%), Query Frame = 1

Query: 1   MGAKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSENDYYVKASEKERATLTIPEIEPPNDG 60
           M AKR LHFD KAPR R SKKGLKSPSRGLQT END YVKASEKE ATLT PE +PPNDG
Sbjct: 8   MVAKRCLHFDSKAPRKRLSKKGLKSPSRGLQTGENDDYVKASEKEGATLTKPETKPPNDG 67

Query: 61  DNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPIVEVSQEVGEDINEAKPNDTTP 120
           DNLDGTHTTPSSP+ FDS AS TRGALQ+LA +GQVSPIVEVSQE  EDINE +PN TT 
Sbjct: 68  DNLDGTHTTPSSPIPFDSPASCTRGALQRLASKGQVSPIVEVSQEECEDINEVEPNHTTL 127

Query: 121 SSPVP 126
           SSPVP
Sbjct: 128 SSPVP 132

BLAST of MELO3C008509 vs. TrEMBL
Match: A0A0A0L5I2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113900 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.0e-16
Identity = 67/143 (46.85%), Postives = 81/143 (56.64%), Query Frame = 1

Query: 3   AKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSE--NDYYVKASE-----------KERATL 62
           AKR + FD KAPR R SK+ LK  S  L T+E  ND  + + E           + + +L
Sbjct: 353 AKRCIDFDSKAPRKRRSKR-LKFLSIDLATTEDVNDGEINSMEGVNITNKLFVDQSQDSL 412

Query: 63  TIPEIEPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPIVEVSQEVGED 122
            +   E PN GDNLD THTTP SP+  DSLAS T   L KLA RGQVSPI++ SQ VGE 
Sbjct: 413 PVAGNERPNIGDNLDSTHTTPESPLPSDSLASLT---LLKLASRGQVSPILDRSQNVGEH 472

Query: 123 INEAKPNDTTPSSPVPTQLPKKK 133
           IN+        S P   Q PKK+
Sbjct: 473 IND--------SEPTMQQHPKKR 483

BLAST of MELO3C008509 vs. TrEMBL
Match: A0A0A0L5I2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113900 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.3e-14
Identity = 63/143 (44.06%), Postives = 82/143 (57.34%), Query Frame = 1

Query: 3   AKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSENDYYVKASEKERATLT-----------I 62
           AKR + FD +  R R SK+ LKS S GL T+E+    + +E+E   +T           +
Sbjct: 113 AKRCVDFDSRESRKRRSKR-LKSLSVGLATTEDGNDGEMNEREGDNITNKLFVDQSQDFL 172

Query: 63  PEI--EPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPIVEVSQEVGED 122
           P +  +PPN  DNLD TH TP SP+  DSLAS    AL KLA RGQVSPI++ SQ VGE 
Sbjct: 173 PVVGKKPPNIRDNLDSTHMTPRSPLPSDSLASL---ALLKLASRGQVSPILDRSQNVGEL 232

Query: 123 INEAKPNDTTPSSPVPTQLPKKK 133
           +N  +P+          QLPKK+
Sbjct: 233 VNVCEPS--------RQQLPKKR 243


HSP 2 Score: 47.0 bits (110), Expect = 2.2e-02
Identity = 43/127 (33.86%), Postives = 61/127 (48.03%), Query Frame = 1

Query: 1   MGAKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSEND---------------YYVKASEKE 60
           M AKR ++FD K  + R SK+ L+S S G  T+E+D               +++  S+  
Sbjct: 697 MVAKRCIYFDPKTLQKRRSKR-LESFSIGPATTEDDNDGKMNKEGDNITNKFFIDQSQNS 756

Query: 61  RATLTIPEIEPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPI-VEVSQ 112
            A       + PN GDN D THT PSSP+  DS ++           R   SP+ ++ SQ
Sbjct: 757 MAAGN----KAPNIGDNHDSTHTIPSSPLPLDSDSTD----------RTPSSPLSLDRSQ 808

BLAST of MELO3C008509 vs. NCBI nr
Match: gi|307136345|gb|ADN34160.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 195.3 bits (495), Expect = 7.2e-47
Identity = 101/125 (80.80%), Postives = 106/125 (84.80%), Query Frame = 1

Query: 1   MGAKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSENDYYVKASEKERATLTIPEIEPPNDG 60
           M AKR LHFD KAPR R SKKGLKSPSRGLQT END YVKASEKE ATLT PE +PPNDG
Sbjct: 8   MVAKRCLHFDSKAPRKRLSKKGLKSPSRGLQTGENDDYVKASEKEGATLTKPETKPPNDG 67

Query: 61  DNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPIVEVSQEVGEDINEAKPNDTTP 120
           DNLDGTHTTPSSP+ FDS AS TRGALQ+LA +GQVSPIVEVSQE  EDINE +PN TT 
Sbjct: 68  DNLDGTHTTPSSPIPFDSPASCTRGALQRLASKGQVSPIVEVSQEECEDINEVEPNHTTL 127

Query: 121 SSPVP 126
           SSPVP
Sbjct: 128 SSPVP 132

BLAST of MELO3C008509 vs. NCBI nr
Match: gi|700201166|gb|KGN56299.1| (hypothetical protein Csa_3G113900 [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 8.6e-16
Identity = 67/143 (46.85%), Postives = 81/143 (56.64%), Query Frame = 1

Query: 3   AKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSE--NDYYVKASE-----------KERATL 62
           AKR + FD KAPR R SK+ LK  S  L T+E  ND  + + E           + + +L
Sbjct: 353 AKRCIDFDSKAPRKRRSKR-LKFLSIDLATTEDVNDGEINSMEGVNITNKLFVDQSQDSL 412

Query: 63  TIPEIEPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPIVEVSQEVGED 122
            +   E PN GDNLD THTTP SP+  DSLAS T   L KLA RGQVSPI++ SQ VGE 
Sbjct: 413 PVAGNERPNIGDNLDSTHTTPESPLPSDSLASLT---LLKLASRGQVSPILDRSQNVGEH 472

Query: 123 INEAKPNDTTPSSPVPTQLPKKK 133
           IN+        S P   Q PKK+
Sbjct: 473 IND--------SEPTMQQHPKKR 483

BLAST of MELO3C008509 vs. NCBI nr
Match: gi|700201166|gb|KGN56299.1| (hypothetical protein Csa_3G113900 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 6.2e-14
Identity = 63/143 (44.06%), Postives = 82/143 (57.34%), Query Frame = 1

Query: 3   AKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSENDYYVKASEKERATLT-----------I 62
           AKR + FD +  R R SK+ LKS S GL T+E+    + +E+E   +T           +
Sbjct: 113 AKRCVDFDSRESRKRRSKR-LKSLSVGLATTEDGNDGEMNEREGDNITNKLFVDQSQDFL 172

Query: 63  PEI--EPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPIVEVSQEVGED 122
           P +  +PPN  DNLD TH TP SP+  DSLAS    AL KLA RGQVSPI++ SQ VGE 
Sbjct: 173 PVVGKKPPNIRDNLDSTHMTPRSPLPSDSLASL---ALLKLASRGQVSPILDRSQNVGEL 232

Query: 123 INEAKPNDTTPSSPVPTQLPKKK 133
           +N  +P+          QLPKK+
Sbjct: 233 VNVCEPS--------RQQLPKKR 243


HSP 2 Score: 47.0 bits (110), Expect = 3.2e-02
Identity = 43/127 (33.86%), Postives = 61/127 (48.03%), Query Frame = 1

Query: 1   MGAKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSEND---------------YYVKASEKE 60
           M AKR ++FD K  + R SK+ L+S S G  T+E+D               +++  S+  
Sbjct: 697 MVAKRCIYFDPKTLQKRRSKR-LESFSIGPATTEDDNDGKMNKEGDNITNKFFIDQSQNS 756

Query: 61  RATLTIPEIEPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPI-VEVSQ 112
            A       + PN GDN D THT PSSP+  DS ++           R   SP+ ++ SQ
Sbjct: 757 MAAGN----KAPNIGDNHDSTHTIPSSPLPLDSDSTD----------RTPSSPLSLDRSQ 808


HSP 3 Score: 92.0 bits (227), Expect = 8.6e-16
Identity = 67/143 (46.85%), Postives = 81/143 (56.64%), Query Frame = 1

Query: 3   AKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSE--NDYYVKASE-----------KERATL 62
           AKR + FD KAPR R SK+ LK  S  L T+E  ND  + + E           + + +L
Sbjct: 316 AKRCIDFDSKAPRKRRSKR-LKFLSIDLATTEDVNDGEINSMEGVNITNKLFVDQSQDSL 375

Query: 63  TIPEIEPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPIVEVSQEVGED 122
            +   E PN GDNLD THTTP SP+  DSLAS T   L KLA RGQVSPI++ SQ VGE 
Sbjct: 376 PVAGNERPNIGDNLDSTHTTPESPLPSDSLASLT---LLKLASRGQVSPILDRSQNVGEH 435

Query: 123 INEAKPNDTTPSSPVPTQLPKKK 133
           IN+        S P   Q PKK+
Sbjct: 436 IND--------SEPTMQQHPKKR 446

BLAST of MELO3C008509 vs. NCBI nr
Match: gi|778676482|ref|XP_011650591.1| (PREDICTED: uncharacterized protein LOC101217008 isoform X2 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 6.2e-14
Identity = 63/143 (44.06%), Postives = 82/143 (57.34%), Query Frame = 1

Query: 3   AKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSENDYYVKASEKERATLT-----------I 62
           AKR + FD +  R R SK+ LKS S GL T+E+    + +E+E   +T           +
Sbjct: 10  AKRCVDFDSRESRKRRSKR-LKSLSVGLATTEDGNDGEMNEREGDNITNKLFVDQSQDFL 69

Query: 63  PEI--EPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPIVEVSQEVGED 122
           P +  +PPN  DNLD TH TP SP+  DSLAS    AL KLA RGQVSPI++ SQ VGE 
Sbjct: 70  PVVGKKPPNIRDNLDSTHMTPRSPLPSDSLASL---ALLKLASRGQVSPILDRSQNVGEL 129

Query: 123 INEAKPNDTTPSSPVPTQLPKKK 133
           +N  +P+          QLPKK+
Sbjct: 130 VNVCEPS--------RQQLPKKR 140


HSP 2 Score: 47.0 bits (110), Expect = 3.2e-02
Identity = 43/127 (33.86%), Postives = 61/127 (48.03%), Query Frame = 1

Query: 1   MGAKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSEND---------------YYVKASEKE 60
           M AKR ++FD K  + R SK+ L+S S G  T+E+D               +++  S+  
Sbjct: 660 MVAKRCIYFDPKTLQKRRSKR-LESFSIGPATTEDDNDGKMNKEGDNITNKFFIDQSQNS 719

Query: 61  RATLTIPEIEPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPI-VEVSQ 112
            A       + PN GDN D THT PSSP+  DS ++           R   SP+ ++ SQ
Sbjct: 720 MAAGN----KAPNIGDNHDSTHTIPSSPLPLDSDSTD----------RTPSSPLSLDRSQ 771


HSP 3 Score: 92.0 bits (227), Expect = 8.6e-16
Identity = 70/142 (49.30%), Postives = 79/142 (55.63%), Query Frame = 1

Query: 3   AKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSE--NDYYVKASEKERAT-----------L 62
           AKR + FD KAPR R SK+ LKS S  L T+E  ND  + A E +  T           L
Sbjct: 319 AKRCIDFDPKAPRRRRSKR-LKSFSVDLATTEDGNDGEINAMEGDNITNKLFVDQSQDSL 378

Query: 63  TIPEIEPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPIVEVSQEVGED 122
            +   E PN  DNLD THTTP SP+  DSLAS    AL KLA RGQVSPI++ SQ VGE 
Sbjct: 379 PVAGNERPNIVDNLDSTHTTPKSPLPSDSLASL---ALLKLASRGQVSPILDRSQNVGER 438

Query: 123 INEAKPNDTTPSSPVPTQLPKK 132
           IN         S P   QLPKK
Sbjct: 439 IN--------VSEPTMQQLPKK 448

BLAST of MELO3C008509 vs. NCBI nr
Match: gi|659102534|ref|XP_008452184.1| (PREDICTED: uncharacterized protein LOC103493280 [Cucumis melo])

HSP 1 Score: 82.8 bits (203), Expect = 5.2e-13
Identity = 63/143 (44.06%), Postives = 80/143 (55.94%), Query Frame = 1

Query: 3   AKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSENDYYVKASEKE-------------RATL 62
           AKR + FD KAPR R SK+ LKS S  L T+EN    + +E+E             + +L
Sbjct: 10  AKRCIDFDPKAPRKRRSKR-LKSLSIDLATTENGNDGEMNEREGDNIGNKLFVDQSQDSL 69

Query: 63  TIPEIEPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPIVEVSQEVGED 122
            +   +PPN  D+LD TH TP SP+  DSLAS    AL KLA +GQVSPI++ SQ V E 
Sbjct: 70  PVVGNKPPNIRDSLDSTHITPRSPLPSDSLASL---ALLKLASKGQVSPILDRSQNVVEL 129

Query: 123 INEAKPNDTTPSSPVPTQLPKKK 133
           IN  +        P   QLPKK+
Sbjct: 130 INVFE--------PTMQQLPKKR 140


HSP 2 Score: 44.7 bits (104), Expect = 1.6e-01
Identity = 44/128 (34.38%), Postives = 61/128 (47.66%), Query Frame = 1

Query: 3   AKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSENDYYVKASEK------------ERATLT 62
           AKR + FD KA + R SK+ LKS S G  T+E+D   K +E+             + ++ 
Sbjct: 665 AKRCIDFDPKALQKRRSKR-LKSLSIGPTTTEDDNDEKMNEEGDNITNKFFVDQSQDSMP 724

Query: 63  IPEIEPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQ------VSPI-VEVS 112
           +   +  N GD+ D THT PSSP+  D+  S  R     L F          SP  ++ S
Sbjct: 725 VAGNKASNIGDDHDSTHTIPSSPLPLDN-DSTDRTPSSPLPFDSDSTHTTPSSPFSLDRS 784


HSP 3 Score: 92.0 bits (227), Expect = 8.6e-16
Identity = 67/143 (46.85%), Postives = 81/143 (56.64%), Query Frame = 1

Query: 3   AKRYLHFDLKAPRTRCSKKGLKSPSRGLQTSE--NDYYVKASE-----------KERATL 62
           AKR + FD KAPR R SK+ LK  S  L T+E  ND  + + E           + + +L
Sbjct: 290 AKRCIDFDSKAPRKRRSKR-LKFLSIDLATTEDVNDGEINSMEGVNITNKLFVDQSQDSL 349

Query: 63  TIPEIEPPNDGDNLDGTHTTPSSPVSFDSLASRTRGALQKLAFRGQVSPIVEVSQEVGED 122
            +   E PN GDNLD THTTP SP+  DSLAS T   L KLA RGQVSPI++ SQ VGE 
Sbjct: 350 PVAGNERPNIGDNLDSTHTTPESPLPSDSLASLT---LLKLASRGQVSPILDRSQNVGEH 409

Query: 123 INEAKPNDTTPSSPVPTQLPKKK 133
           IN+        S P   Q PKK+
Sbjct: 410 IND--------SEPTMQQHPKKR 420

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
E5GCG1_CUCME5.0e-4780.80Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0L5I2_CUCSA6.0e-1646.85Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113900 PE=4 SV=1[more]
A0A0A0L5I2_CUCSA4.3e-1444.06Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|307136345|gb|ADN34160.1|7.2e-4780.80hypothetical protein [Cucumis melo subsp. melo][more]
gi|700201166|gb|KGN56299.1|8.6e-1646.85hypothetical protein Csa_3G113900 [Cucumis sativus][more]
gi|700201166|gb|KGN56299.1|6.2e-1444.06hypothetical protein Csa_3G113900 [Cucumis sativus][more]
gi|778676482|ref|XP_011650591.1|6.2e-1444.06PREDICTED: uncharacterized protein LOC101217008 isoform X2 [Cucumis sativus][more]
gi|659102534|ref|XP_008452184.1|5.2e-1344.06PREDICTED: uncharacterized protein LOC103493280 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008509T1MELO3C008509T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None