MELO3C008377 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008377
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionReverse transcriptase
Locationchr3 : 4768636 .. 4770244 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATCTTCAAGGATTTCTTTGAGAAAGGTGTTATCAACAAGAATATGAATAACACATACATTGCGTTGATTGGAAAAAAGAAGGACTATTCTCACCCAAAAGATTTCAGACCAATCAGCCTAACAACGTCCATCTATAAGATCATTGCTAAAACTCTTTCCAATAGATTAAAAACCACCCTTCCAGGCACTATCTCAGGAAACCAATTAGCTTTTATCAAGAATCGCCAAATAACAGATGCTATCCTAATGGCGAATGAAGCTGTGGATTATTGGAAGGTCAAGAAGATTAAAGGCTTTATTTTGAAGCTTGACATCGAAAAGGTTTTTTACAATCTGAATTGGGATTTCATTGATTATGTCTTGGGGAAAAAGAATTTTCCAAATTCTTGGAGGAAGTGGATAAGAGGATGCATAAGCAATGTCACTTATTCTGTAATTATCAATGGAAGACCCCAAGGTCGAATCAAAGCCAACAGAGGCCTTAGACAAGGTGACCCCCTTTCCCCCTTCCTGTTTGTTATTGCAATGGATTACTTTAGCCGGCTTTTATCCCATCTGGAAGCTTCTGGTGCCATTAAAGGGGTTTCCCTCAACAATAATTGCAACATCTCCCACATCCTTTTCGCTGATGATATTCTCCTTTTCGTAGAAGATAATGATTGTTTTCTGAATAACCTTATAATGGCTTTATCTCTGTTTGAAAAAGCCTCGGGTCTCAAAATAAATTTGTTGAAATCAGCTCTGGTGCCAGTGAATGTTTCCTTGAATAGAGCTAAAGAGTGTGCTTCTTTTTGGGGTATTTCGTGTCATTCTCTCCTCCTTTCCTACTTGGGAGTTCCTCTCGGTGGTAACCCAAAAGCCAACCTTTTTTGGCGAAATGTTGAAGATAAGATCCAAAAGAAGCTTAATAATTGGAAATAAGCCCAGATATCAAAAGGTGGAAGACTCACTTTAATCAAGTCTACCCTTAGCAGTCTTCCCATATATCAACCCTTTGTTTTCCAAGCTCCTTCCTCGACGTGCAAAAACATCGAAAAATCCTGGAGAAATTTCCTTTGGAAAGGTAGCAATGGCTCGAAAGGGTCTCACTTAATCAACTGGACTAAAGTGTTTAAATCTAAAGAGGAGGGTGGTCTGGGTATCTCAAGGCTTCAAGTGACAAACAAAGCTCTCTTATCTAAATGGCTTTGGCGTTACTTCTCGGAGCCTAACGCCCTATGGAGGAGGTTAATTCAATGTAAATACAAAGGCAAACATCCAGGAGACATTCCTTCAAACAACTCCTCTAGTTCTTCTAAAGCCCCGTGGAGATCTATCATCGACAACATCGATTGGTTCAAAAGTAATCAAAGTTGGGATTTGAACAATGGAGACCAAATCTCCTTCTGGTATTCTAATTGGTCTCAAGAAGGATGCCTTTCAACTGCCTATCCTAGACTTTTCGCTCTTACTCTTGACAAAGAAATCTCAGTAAAAGATGCGTGGAACACAATCGACAATCAATGGGCAATAAACTTTAGAAGAGAGTTGAACGATAGAGAAAGATGCAATTGGGAGAAAATTTTAGAAATTCTTCCTACTCCGAGACCTAATAGAGGGTCAA

mRNA sequence

ATGGATATCTTCAAGGATTTCTTTGAGAAAGGTGTTATCAACAAGAATATGAATAACACATACATTGCGTTGATTGGAAAAAAGAAGGACTATTCTCACCCAAAAGATTTCAGACCAATCAGCCTAACAACGTCCATCTATAAGATCATTGCTAAAACTCTTTCCAATAGATTAAAAACCACCCTTCCAGGCACTATCTCAGGAAACCAATTAGCTTTTATCAAGAATCGCCAAATAACAGATGCTATCCTAATGGCGAATGAAGCTGTGGATTATTGGAAGGTCAAGAAGATTAAAGGCTTTATTTTGAAGCTTGACATCGAAAAGGTTTTTTACAATCTGAATTGGGATTTCATTGATTATGTCTTGGGGAAAAAGAATTTTCCAAATTCTTGGAGGAAGTGGATAAGAGGATGCATAAGCAATGTCACTTATTCTGTAATTATCAATGGAAGACCCCAAGGTCGAATCAAAGCCAACAGAGGCCTTAGACAAGGTGACCCCCTTTCCCCCTTCCTGTTTGTTATTGCAATGGATTACTTTAGCCGGCTTTTATCCCATCTGGAAGCTTCTGGTGCCATTAAAGGGGTTTCCCTCAACAATAATTGCAACATCTCCCACATCCTTTTCGCTGATGATATTCTCCTTTTCGTAGAAGATAATGATTGTTTTCTGAATAACCTTATAATGGCTTTATCTCTGTTTGAAAAAGCCTCGGGTCTCAAAATAAATTTGTTGAAATCAGCTCTGGTGCCAGTGAATGTTTCCTTGAATAGAGCTAAAGAGTGTGCTTCTTTTTGGGGTATTTCGTGTCATTCTCTCCTCCTTTCCTACTTGGGAGTTCCTCTCGGTGCTCCTTCCTCGACGTGCAAAAACATCGAAAAATCCTGGAGAAATTTCCTTTGGAAAGGTAGCAATGGCTCGAAAGGGTCTCACTTAATCAACTGGACTAAAGTGTTTAAATCTAAAGAGGAGGGTGGTCTGGGTATCTCAAGGCTTCAAGTGACAAACAAAGCTCTCTTATCTAAATGGCTTTGGCGTTACTTCTCGGAGCCTAACGCCCTATGGAGGAGGTTAATTCAATGTAAATACAAAGGCAAACATCCAGGAGACATTCCTTCAAACAACTCCTCTAGTTCTTCTAAAGCCCCGTGGAGATCTATCATCGACAACATCGATTGGTTCAAAAGTAATCAAAGTTGGGATTTGAACAATGGAGACCAAATCTCCTTCTGGTATTCTAATTGGTCTCAAGAAGGATGCCTTTCAACTGCCTATCCTAGACTTTTCGCTCTTACTCTTGACAAAGAAATCTCAGTAAAAGATGCGTGGAACACAATCGACAATCAATGGGCAATAAACTTTAGAAGAGAGTTGAACGATAGAGAAAGATGCAATTGGGAGAAAATTTTAGAAATTCTTCCTACTCCGAGACCTAATAGAGGGTCAA

Coding sequence (CDS)

ATGGATATCTTCAAGGATTTCTTTGAGAAAGGTGTTATCAACAAGAATATGAATAACACATACATTGCGTTGATTGGAAAAAAGAAGGACTATTCTCACCCAAAAGATTTCAGACCAATCAGCCTAACAACGTCCATCTATAAGATCATTGCTAAAACTCTTTCCAATAGATTAAAAACCACCCTTCCAGGCACTATCTCAGGAAACCAATTAGCTTTTATCAAGAATCGCCAAATAACAGATGCTATCCTAATGGCGAATGAAGCTGTGGATTATTGGAAGGTCAAGAAGATTAAAGGCTTTATTTTGAAGCTTGACATCGAAAAGGTTTTTTACAATCTGAATTGGGATTTCATTGATTATGTCTTGGGGAAAAAGAATTTTCCAAATTCTTGGAGGAAGTGGATAAGAGGATGCATAAGCAATGTCACTTATTCTGTAATTATCAATGGAAGACCCCAAGGTCGAATCAAAGCCAACAGAGGCCTTAGACAAGGTGACCCCCTTTCCCCCTTCCTGTTTGTTATTGCAATGGATTACTTTAGCCGGCTTTTATCCCATCTGGAAGCTTCTGGTGCCATTAAAGGGGTTTCCCTCAACAATAATTGCAACATCTCCCACATCCTTTTCGCTGATGATATTCTCCTTTTCGTAGAAGATAATGATTGTTTTCTGAATAACCTTATAATGGCTTTATCTCTGTTTGAAAAAGCCTCGGGTCTCAAAATAAATTTGTTGAAATCAGCTCTGGTGCCAGTGAATGTTTCCTTGAATAGAGCTAAAGAGTGTGCTTCTTTTTGGGGTATTTCGTGTCATTCTCTCCTCCTTTCCTACTTGGGAGTTCCTCTCGGTGCTCCTTCCTCGACGTGCAAAAACATCGAAAAATCCTGGAGAAATTTCCTTTGGAAAGGTAGCAATGGCTCGAAAGGGTCTCACTTAATCAACTGGACTAAAGTGTTTAAATCTAAAGAGGAGGGTGGTCTGGGTATCTCAAGGCTTCAAGTGACAAACAAAGCTCTCTTATCTAAATGGCTTTGGCGTTACTTCTCGGAGCCTAACGCCCTATGGAGGAGGTTAATTCAATGTAAATACAAAGGCAAACATCCAGGAGACATTCCTTCAAACAACTCCTCTAGTTCTTCTAAAGCCCCGTGGAGATCTATCATCGACAACATCGATTGGTTCAAAAGTAATCAAAGTTGGGATTTGAACAATGGAGACCAAATCTCCTTCTGGTATTCTAATTGGTCTCAAGAAGGATGCCTTTCAACTGCCTATCCTAGACTTTTCGCTCTTACTCTTGACAAAGAAATCTCAGTAAAAGATGCGTGGAACACAATCGACAATCAATGGGCAATAAACTTTAGAAGAGAGTTGAACGATAGAGAAAGATGCAATTGGGAGAAAATTTTAGAAATTCTTCCTACTCCGAGACCTAATAGAGGGTCAA

Protein sequence

MDIFKDFFEKGVINKNMNNTYIALIGKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPGTISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGFILKLDIEKVFYNLNWDFIDYVLGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDYFSRLLSHLEASGAIKGVSLNNNCNISHILFADDILLFVEDNDCFLNNLIMALSLFEKASGLKINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLGAPSSTCKNIEKSWRNFLWKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALLSKWLWRYFSEPNALWRRLIQCKYKGKHPGDIPSNNSSSSSKAPWRSIIDNIDWFKSNQSWDLNNGDQISFWYSNWSQEGCLSTAYPRLFALTLDKEISVKDAWNTIDNQWAINFRRELNDRERCNWEKILEILPTPRPNRGS
Homology
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BLAST of MELO3C008377 vs. Swiss-Prot
Match: LORF2_HUMAN (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 5.1e-23
Identity = 82/285 (28.77%), Postives = 133/285 (46.67%), Query Frame = 1 

Query: 1   MDIFKDFFEKGVINKNMNNTYIALIGKK-KDYSHPKDFRPISLTTSIYKIIAKTLSNRLK 60
           + +F+   ++G++  +     I LI K  +D +  ++FRPISL     KI+ K L+NR++
Sbjct: 493 LKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQ 552

Query: 61  TTLPGTISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGF-ILKLDIEKVFYNLNWDF 120
             +   I  +Q+ FI   Q    I  +   + +    K K   I+ +D EK F  +   F
Sbjct: 553 QHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPF 612

Query: 121 IDYVLGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAM 180
           +   L K      + K IR      T ++I+NG+         G RQG PLSP LF I +
Sbjct: 613 MLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVL 672

Query: 181 DYFSRLLSHLEASGAIKGVSLNNNCNISHILFADDILLFVEDNDCFLNNLIMALSLFEKA 240
           +  +R +   +    IKG+ L     +   LFADD+++++E+      NL+  +S F K 
Sbjct: 673 EVLARAIRQEKE---IKGIQLGKE-EVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKV 732

Query: 241 SGLKINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPL 284
           SG KIN+ KS     N +     +       +  S  + YLG+ L
Sbjct: 733 SGYKINVQKSQAFLYNNNRQTESQIMGELPFTIASKRIKYLGIQL 773

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BLAST of MELO3C008377 vs. Swiss-Prot
Match: LORF2_MOUSE (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 6.8e-20
Identity = 93/353 (26.35%), Postives = 151/353 (42.78%), Query Frame = 1 

Query: 3   IFKDFFEKGVINKNMNNTYIALIGK-KKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTT 62
           +F     +G +  +     I LI K +KD +  ++FRPISL     KI+ K L+NR++  
Sbjct: 502 LFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEH 561

Query: 63  LPGTISGNQLAFIKNRQITDAILMANEAVDYW-KVKKIKGFILKLDIEKVFYNLNWDFID 122
           +   I  +Q+ FI   Q    I  +   + Y  K+K     I+ LD EK F  +   F+ 
Sbjct: 562 IKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMI 621

Query: 123 YVLGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDY 182
            VL +      +   I+   S    ++ +NG     I    G RQG PLSP+LF I ++ 
Sbjct: 622 KVLERSGIQGPYLNMIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEV 681

Query: 183 FSRLLSHLEASGAIKGVSLNNNCNISHILFADDILLFVEDNDCFLNNLIMALSLFEKASG 242
            +R +   +    IKG+ +     +   L ADD+++++ D       L+  ++ F +  G
Sbjct: 682 LARAIRQQK---EIKGIQIGKE-EVKISLLADDMIVYISDPKNSTRELLNLINSFGEVVG 741

Query: 243 LKINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLGAPSSTCKNIEKSW-RN 302
            KIN  KS       +    KE       S  +  + YLGV L       K ++  + +N
Sbjct: 742 YKINSNKSMAFLYTKNKQAEKEIRETTPFSIVTNNIKYLGVTL------TKEVKDLYDKN 801

Query: 303 FLWKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALLSKWLWRYFSEP 353
           F  K         L  W      K+     I R+ +   A+L K ++R+ + P
Sbjct: 802 F--KSLKKEIKEDLRRW------KDLPCSWIGRINIVKMAILPKAIYRFNAIP 836

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BLAST of MELO3C008377 vs. Swiss-Prot
Match: YTX2_XENLA (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-16
Identity = 76/283 (26.86%), Postives = 132/283 (46.64%), Query Frame = 1 

Query: 3   IFKDFFEKGVINKNMNNTYIALIGKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTL 62
           +  + F+KG +  +     ++L+ KK D    K++RP+SL ++ YKI+AK +S RLK+ L
Sbjct: 491 VLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVL 550

Query: 63  PGTISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGFILKLDIEKVFYNLNWDFIDYV 122
              I  +Q   +  R I D + +  + + + +   +    L LD EK F  ++  ++   
Sbjct: 551 AEVIHPDQSYTVPGRTIFDNVFLIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYLIGT 610

Query: 123 LGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDYFS 182
           L   +F   +  +++   ++    V IN      +   RG+RQG PLS  L+ +A++ F 
Sbjct: 611 LQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPFL 670

Query: 183 RLLSHLEASGAIKGVSLNNNCNISHILFADDILLFVEDNDCFLNNLIMALSLFEKASGLK 242
            LL        +K      +  +    +ADD++L  +D    L        ++  AS  +
Sbjct: 671 CLLRKRLTGLVLK----EPDMRVVLSAYADDVILVAQDL-VDLERAQECQEVYAAASSAR 730

Query: 243 INLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLGA 286
           IN  KS+ + +  SL       +F  IS  S ++ YLGV L A
Sbjct: 731 INWSKSSGL-LEGSLKVDFLPPAFRDISWESKIIKYLGVYLSA 767

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BLAST of MELO3C008377 vs. Swiss-Prot
Match: RNHX1_ARATH (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.5e-16
Identity = 48/135 (35.56%), Postives = 65/135 (48.15%), Query Frame = 1 

Query: 286 PSSTCKNIEKSWRNFLWKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALLSKWL 345
           P S    +++  R FLW  +   K  HL+ W+KV   K+EGGLG+   +  N+AL+SK  
Sbjct: 59  PQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVG 118

Query: 346 WRYFSEPNALWRRLIQCKYKGKHPGDIPSNN---SSSSSKAPWRSIIDNI-DWFKSNQSW 405
           WR   E N+LW  ++Q KY   H G+I  +       S  + WRSI   + D       W
Sbjct: 119 WRLLQEKNSLWTLVLQKKY---HVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGW 178

Query: 406 DLNNGDQISFWYSNW 417
              +G QI FW   W
Sbjct: 179 IPGDGQQIRFWTDRW 190

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BLAST of MELO3C008377 vs. Swiss-Prot
Match: PO22_POPJA (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.1e-15
Identity = 64/234 (27.35%), Postives = 113/234 (48.29%), Query Frame = 1 

Query: 24  LIGKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPGTISGNQLAFIKNRQITDAI 83
           LI K  D  +P ++RPI++ +++ +++ + L+ RL+  +    +    A I    +   +
Sbjct: 63  LIPKDGDLENPSNWRPITIASALQRLLHRILAKRLEAAVELHPAQKGYARIDGTLVNSLL 122

Query: 84  LMANEAVDYWKVKKIKGFILKLDIEKVFYNLNWDFIDYVLGKKNFPNSWRKWIRGCISNV 143
           L  +  +   + ++    ++ LD+ K F  ++   I   L +         +I G +S+ 
Sbjct: 123 L--DTYISSRREQRKTYNVVSLDVRKAFDTVSHSSICRALQRLGIDEGTSNYITGSLSDS 182

Query: 144 TYSVIINGRPQGR-IKANRGLRQGDPLSPFLFVIAMDYFSRLLSHLEASGAIKGVSLNNN 203
           T ++ +    Q R I   RG++QGDPLSPFLF   +D    LL  L+++  I G      
Sbjct: 183 TTTIRVGPGSQTRKICIRRGVKQGDPLSPFLFNAVLD---ELLCSLQSTPGIGGTI--GE 242

Query: 204 CNISHILFADDILLFVEDNDCFLNNLIMALSLFEKASGLKINLLKSALVPVNVS 257
             I  + FADD+LL +EDND  L   +  ++ F +  G+ +N  KS  + V  S
Sbjct: 243 EKIPVLAFADDLLL-LEDNDVLLPTTLATVANFFRLRGMSLNAKKSVSISVAAS 288

[Close]
BLAST of MELO3C008377 vs. TrEMBL
Match: A5BSZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035610 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 8.5e-94
Identity = 189/475 (39.79%), Postives = 272/475 (57.26%), Query Frame = 1 

Query: 3    IFKDFFEKGVINKNMNNTYIALIGKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTL 62
            +F +F   G+IN++ N ++I L+ KK       ++RPISL TS+YKIIAK L  RL+  L
Sbjct: 934  VFDEFHRSGIINQSTNASFIVLLPKKSMAKKISBYRPISLITSLYKIIAKVLXGRLRGIL 993

Query: 63   PGTISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGFILKLDIEKVFYNLNWDFIDYV 122
              TI   Q AF++ RQI DA+L+ANE VD  K    +G + K+D EK + +++WDF+D+V
Sbjct: 994  HETIHSTQGAFVQGRQILDAVLIANEIVDEKKRSGXEGVVFKIDFEKAYDHVSWDFLDHV 1053

Query: 123  LGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDYFS 182
            + KK F   WRKWIRGC+S+V++++++NG  +G +KA+RGLRQGDPLSPFLF I  D  S
Sbjct: 1054 MEKKGFNPKWRKWIRGCLSSVSFAILVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLS 1113

Query: 183  RLLSHLEASGAIKGVSL-NNNCNISHILFADDILLFVEDNDCFLNNLIMALSLFEKASGL 242
            R+L   E     +G  +  N   +SH+ FADD + F    +  L  L   L +F   SGL
Sbjct: 1114 RMLLRAEERNVFEGFRVGRNRTRVSHLQFADDTIFFXSTREEDLLTLKSVLVVFGHISGL 1173

Query: 243  KINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLGAPSSTCKNIEKSWRNFL 302
            K+NL KS +  +N+  +     A           + YLG+PLG    + + IE+  R+FL
Sbjct: 1174 KVNLDKSNIYGINLGQDHLHRLAKLLDCKASGWPILYLGLPLGGNPKSGR-IERLQRDFL 1233

Query: 303  WKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALLSKWLWRYFSEPNALWRRLIQ 362
            W G    K  HL++W  V KSK +GGLG+ R+ + N ALL KWLWRY  E +ALW ++I 
Sbjct: 1234 WSGVGEGKRDHLVSWDVVCKSKMKGGLGLGRISLRNSALLGKWLWRYPKEGSALWHQVIL 1293

Query: 363  CKYKGKHPGDIPSNNSSS-SSKAPWRSIIDNIDWFKSNQSWDLNNGDQISFWYSNWSQEG 422
              Y G H     +N     S + PW++I      F     + + +GD+I FW   W  + 
Sbjct: 1294 SIY-GSHSNGWDANTVVRWSHRCPWKAIAQVFQDFSKFTRFMVGDGDRIRFWEDLWWGDQ 1353

Query: 423  CLSTAYPRLFALTLDKEISVKD-AWNTIDNQWAINFRRELNDRERCNWEKILEIL 475
             L   +PRL  + +DK I +     +T    W  NFRR L+D E    E +++ L
Sbjct: 1354 SLGVRFPRLLRVVMDKNIPISSILGSTRPFSWNFNFRRNLSDSEIEEVESLMQSL 1406

[Close]
BLAST of MELO3C008377 vs. TrEMBL
Match: A5BA26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032700 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.0e-91
Identity = 190/477 (39.83%), Postives = 263/477 (55.14%), Query Frame = 1 

Query: 3   IFKDFFEKGVINKNMNNTYIALIGKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTL 62
           +F +F   GVIN++ N ++I LI KK       DFRPISL TS+YKIIAK LS RL+  L
Sbjct: 303 VFAEFHRSGVINQSTNASFIVLIPKKSLSKRISDFRPISLITSLYKIIAKVLSGRLRGVL 362

Query: 63  PGTISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGFILKLDIEKVFYNLNWDFIDYV 122
             TI   Q AF++ RQI DA+L+ANE VD  +    +G + K+D EK + ++ WDF+D+V
Sbjct: 363 HQTIHYTQGAFVQGRQILDAVLIANEIVDERRRSGEEGVVFKIDFEKAYDHVKWDFLDHV 422

Query: 123 LGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDYFS 182
           L KK F   WRKW+ GC+S+V+Y++++NG  +G +KA+RGLRQGDPLSPFLF +  D  S
Sbjct: 423 LEKKGFSPRWRKWMSGCLSSVSYAILVNGSAKGWVKASRGLRQGDPLSPFLFTLVADVLS 482

Query: 183 RLLSHLEASGAIKGVSLN-NNCNISHILFADDILLFVEDNDCFLNNLIMALSLFEKASGL 242
           R++   E    ++G  +  N   +SH+ FADD + F    +  L  L   L +F   SGL
Sbjct: 483 RMIMRAEERNMMEGFRVGXNRTRVSHLQFADDTIFFSNSREEXLQTLKSLLLVFGHISGL 542

Query: 243 KINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLGAPSSTC----------- 302
           K+NL KS++  +N+        A           + YLG+PLG     C           
Sbjct: 543 KVNLNKSSIYGINLDQALLSRLAEMLDXKASGWPILYLGLPLGGNPKACGFWDPVVERIS 602

Query: 303 --KNIEKSWRNFLWKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALLSKWLWRY 362
               IE+  R+FLW G    K  HL+ W  V K K  GGLG+  +   N ALL KWLWRY
Sbjct: 603 MAAKIERLQRDFLWSGFGEGKRDHLVRWDVVCKPKTIGGLGLGNISWRNLALLGKWLWRY 662

Query: 363 FSEPNALWRRLIQCKYKGKHPGDIPSNNSSS-SSKAPWRSIIDNIDWFKSNQSWDLNNGD 422
             E +ALW ++I   Y G H     +N     S + PW++I      F     + + NG+
Sbjct: 663 PREGSALWHQVILSIY-GSHSNGWDANTLVRWSHRCPWKAIAQVFQGFSLITRYVVGNGE 722

Query: 423 QISFWYSNWSQEGCLSTAYPRLFALTLDKEISVKDAWN-TIDNQWAINFRRELNDRE 464
           +I FW   W  +  L   YPRLF + +DK IS+      +    W +NFRR L+D E
Sbjct: 723 RIRFWEDLWWGDQPLGIQYPRLFRVVVDKNISISSVLGPSRPFLWNLNFRRNLSDYE 778

[Close]
BLAST of MELO3C008377 vs. TrEMBL
Match: A5C4L0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014001 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 3.3e-90
Identity = 185/492 (37.60%), Postives = 272/492 (55.28%), Query Frame = 1 

Query: 1    MDIFKDFFEKGVINKNMNNTYIALIGKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKT 60
            + +F++F+  G   +++N+T++ LI KK+      DF PISL  S+YK++AK L+NRLK+
Sbjct: 1237 LGLFREFYLHGTFQRSLNSTFLLLIPKKEGTEDLSDFXPISLVXSVYKLLAKVLANRLKS 1296

Query: 61   TLPGTISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGFILKLDIEKVFYNLNWDFID 120
             +   IS +Q AF+  RQI DA+L+ANEA+D        G +LK+DIEK F ++ WDF+ 
Sbjct: 1297 XMGEVISDSQHAFVHGRQILDAVLIANEALDSRLKGNNPGLLLKMDIEKAFDHVKWDFLM 1356

Query: 121  YVLGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDY 180
             V+ K  F + W KW+  C S  ++S++ING P G  +++RGLRQGDPLSP+LF+ AM+ 
Sbjct: 1357 DVMSKMGFGHRWIKWMNWCCSTASFSILINGSPSGFFRSSRGLRQGDPLSPYLFLFAMEA 1416

Query: 181  FSRLLSHLEASGAIKGVSLNNNCN----ISHILFADDILLFVEDNDCFLNNLIMALSLFE 240
             S+LLS     G I G  +         +SH+LFADD L+F +     L  L      FE
Sbjct: 1417 LSQLLSGARNGGFISGFRVGGRGREGLIVSHLLFADDTLIFCDXEADQLRYLSWTFMWFE 1476

Query: 241  KASGLKINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLGAP---------- 300
              SGLK+NL K+  +PV   +   +   S  G    SL  SYLG+PLGAP          
Sbjct: 1477 AISGLKVNLSKTEAIPVGEGI-PMETLXSVLGCKIGSLPTSYLGLPLGAPYKSTRVWDAV 1536

Query: 301  -----SSTCKNIEKSWRNFLWKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALL 360
                    C  +EK  R+FLW G       HL++W  +  +K++GGLGI  L   NKALL
Sbjct: 1537 EERFQEKVCARLEKIQRDFLWGGGALENKPHLVSWKAICATKKKGGLGIRSLSTFNKALL 1596

Query: 361  SKWLWRYFSEPNALWRRLIQCKYKGKHPGDIPSNNSSSSSKAPWRSIIDNIDWFKSNQSW 420
             KWLWR+ +E  +LW+++I  KY  +  G              W++I +  + F+S+  +
Sbjct: 1597 GKWLWRFANENESLWKQIISSKYDLQEGGWCSKGVRDRYGVGVWKAIRNGXENFRSHSRF 1656

Query: 421  DLNNGDQISFWYSNWSQEGCLSTAYPRLFALTLDKEISVKDAW--NTIDNQWAINFRREL 472
             + +G ++ FW   W     L  A+P LF L+++K+  V +AW    +   W   F R L
Sbjct: 1657 IIGDGTRVKFWKDLWCGNQALEEAFPILFNLSVNKDGWVAEAWEEEEVGGSWGPRFNRHL 1716

[Close]
BLAST of MELO3C008377 vs. TrEMBL
Match: A5B2E0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029931 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 2.8e-89
Identity = 181/480 (37.71%), Postives = 268/480 (55.83%), Query Frame = 1 

Query: 1    MDIFKDFFEKGVINKNMNNTYIALIGKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKT 60
            MD+FK+FF +    K++N T++ LI KK       +FRPISL   +YK++AK L+NRLK 
Sbjct: 1211 MDLFKEFFVQKSFAKSLNTTFLVLIPKKGGAEDLGEFRPISLLGGLYKLVAKVLANRLKK 1270

Query: 61   TLPGTISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGFILKLDIEKVFYNLNWDFID 120
             L   +S +Q AF++ RQI DA L+ANE VD+W  +K KG I KLDIEK + ++NW+F+ 
Sbjct: 1271 VLGKVVSMDQNAFVRGRQILDASLIANEVVDFWYKRKEKGLICKLDIEKAYDSINWNFLM 1330

Query: 121  YVLGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDY 180
             VL K  F + W +WI  CIS   +S+++NG P G   +++GLRQGDPLSP+LFV+ M+ 
Sbjct: 1331 KVLQKMGFGSRWMEWIWWCISTAKFSILVNGVPAGFFPSSKGLRQGDPLSPYLFVMGMEV 1390

Query: 181  FSRLLSHLEASGAIKGVSLNNN----CNISHILFADDILLFVEDNDCFLNNLIMALSLFE 240
             S L+      G + G SL         +SH+LFADD ++F E    +L +L   L+ FE
Sbjct: 1391 LSALIRRAVGGGFVSGCSLKGRGGLVMEVSHLLFADDTIIFCEAKKEYLTSLSWILAWFE 1450

Query: 241  KASGLKINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLGAPSSTCKNIEKS 300
             ASGL                N+  + A +  I  + L L  +      P S  K +EK 
Sbjct: 1451 AASGLS---------------NKPSQKAPWASIPIYQLSLFRM------PKSVAKRLEKL 1510

Query: 301  WRNFLWKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALLSKWLWRYFSEPNALW 360
             R+FLW G    +  HLINW  V   K +GGLGI ++ + NKALLSKW+WR+  E   LW
Sbjct: 1511 QRDFLWGGGRMERKIHLINWEVVCTQKVKGGLGIRKIDLLNKALLSKWIWRFAFEEGTLW 1570

Query: 361  RRLIQCKYKGKHPGDIPSNNSSSSSKAPWRSIIDNIDWFKSNQSWDLNNGDQISFWYSNW 420
            +++I  KY  +  G   +    +     W+ I+   +W   N  + +  G +++FW  +W
Sbjct: 1571 KKVIGVKYGQEGLGWRTNEARGAFGVXVWKEILKEANWCWDNIRFKVGKGTRVNFWTDHW 1630

Query: 421  SQEGCLSTAYPRLFALTLDKEISVKDAWNTIDNQ--WAINFRRELNDRERCNWEKILEIL 475
              +  LS  +P+LFAL + K  ++ + W++   Q  W + F R+ ND E    E +  +L
Sbjct: 1631 CGDEALSRIFPQLFALAVHKNATISEVWDSSLGQGGWNLRFARDSNDWELVVIEALFNML 1669

[Close]
BLAST of MELO3C008377 vs. TrEMBL
Match: A5BX70_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011015 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.1e-85
Identity = 187/506 (36.96%), Postives = 274/506 (54.15%), Query Frame = 1 

Query: 1   MDIFKDFFEKGVINKNMNNTYIALIGKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKT 60
           M  FK+F E+G   K++N T++ L+ K+      KDFRPISL  S+YK++AK L+NR+K 
Sbjct: 440 MGFFKEFHERGRFVKSLNXTFLVLVPKRGGAEDLKDFRPISLXGSLYKLLAKVLANRIKK 499

Query: 61  TLPGTISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGFILKLDIEKVFYNLNWDFID 120
            L   IS +Q AF++ RQI DA+L+ANEAVD      + G + KLDIEK +  ++W F+ 
Sbjct: 500 VLGKVISESQNAFVEGRQILDAVLIANEAVDSRLKBNVGGVLCKLDIEKAYDRVSWSFLL 559

Query: 121 YVLGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDY 180
             L +  F   W KWI  CIS V +SV++NG P G  ++ RGLRQGDPLSP+LFVIAM+ 
Sbjct: 560 AXLKEMGFGERWIKWIDWCISTVKFSVLVNGSPSGFFQSXRGLRQGDPLSPYLFVIAMEV 619

Query: 181 FSRLLSHLEASGAIKGVSLN----NNCNISHILFADDILLFVEDNDCFLNNLIMALSLFE 240
           FS ++    + G + G  ++       +ISH+LFADD L+F E++   +  L   L  FE
Sbjct: 620 FSSMMRRAISGGYLSGWKVSGGRGEGMHISHLLFADDTLVFCEESSDEMTYLSWLLMWFE 679

Query: 241 KASGLKINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLGAPSSTC------ 300
             SGL+INL KS ++PV   LN  +  A   G     +  SYLG+PLGA  ++       
Sbjct: 680 ACSGLRINLEKSEMIPVGRVLN-IEGLALELGCKVGGIPSSYLGMPLGAAFNSLAVWDGV 739

Query: 301 -------------KNIEKSWRNFLWKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTN 360
                        + I K  R  L + +  +   HL+ W  V   K +GGLG+  L + N
Sbjct: 740 EERFRRRLAMXKRQYISKGGRLTLIRSTMSTHKPHLVRWNLVCLEKRKGGLGVRNLSLMN 799

Query: 361 KALLSKWLWRYFSEPNALWRRLIQCKYKGKHPGDIPSNNSSSSSKAPWRSIIDNIDWFKS 420
            ALL KW WR+ +E + LWR +I  KY  +  G    +    +    W++I      F  
Sbjct: 800 NALLCKWNWRFANERDXLWRSVISLKYGVEEXGWCTRDVMGRNGVGLWKAIRKKWGLFDG 859

Query: 421 NQSWDLNNGDQISFWYSNWSQEGCLSTAYPRLFALTLDKEISVKDAWNTIDN--QWAINF 480
             ++ L NG ++ FW   W  +G L  ++P LF++++ K   V + WN + +   W   F
Sbjct: 860 RVAFHLGNGQRVKFWKDKWCGDGPLCESFPSLFSMSMSKNAWVSEVWNPVXDGIGWTPLF 919

Query: 481 RRELNDRERCNWEKILEILPTPRPNR 482
            R  ND E    E++L+ +   R  R
Sbjct: 920 ARXFNDWEIDLVERLLQKIQAFRVQR 944

[Close]
BLAST of MELO3C008377 vs. TAIR10
Match: ATMG01250.1 (ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase))

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-12
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 1 

Query: 148 IINGRPQGRIKANRGLRQGDPLSPFLFVIAMDYFSRLLSHLEASGAIKGVSLNNNC-NIS 207
           IING PQG +  +RGLRQGDPLSP+LF++  +  S L    +  G + G+ ++NN   I+
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 208 HILFADD 214
           H+LFADD
Sbjct: 73  HLLFADD 79

[Close]
BLAST of MELO3C008377 vs. TAIR10
Match: AT4G29090.1 (AT4G29090.1 Ribonuclease H-like superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 9.5e-12
Identity = 37/131 (28.24%), Postives = 56/131 (42.75%), Query Frame = 1 

Query: 286 PSSTCKNIEKSWRNFLWKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALLSKWL 345
           P + CK I     +F W+    +KG H   W  +   K EGG+G   ++  N ALL K +
Sbjct: 14  PKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQM 73

Query: 346 WRYFSEPNALWRRLIQCKYKGKHPGDIPSNNSSSSSKAPWRSIIDNIDWFKSNQSWDLNN 405
           WR  S P +L  ++ + +Y   H  D  +    S     W+SI  + +  +      + N
Sbjct: 74  WRMLSRPESLMAKVFKSRY--FHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGN 133

Query: 406 GDQISFWYSNW 417
           G+ I  W   W
Sbjct: 134 GEDIIIWRHKW 142

[Close]
BLAST of MELO3C008377 vs. TAIR10
Match: ATMG00310.1 (ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein)

HSP 1 Score: 56.2 bits (134), Expect = 6.4e-08
Identity = 36/128 (28.12%), Postives = 55/128 (42.97%), Query Frame = 1 

Query: 290 CKNIEKSWRNFLWKGSNGSKGSHLINWTKVFKSK-EEGGLGISRLQVTNKALLSKWLWRY 349
           CK +  +   F W      +    + W K+ KSK ++GGLG   L   N+ALL+K  +R 
Sbjct: 18  CKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRI 77

Query: 350 FSEPNALWRRLIQCKYKGKHPGDIPSNNSSSSSKAPWRSIIDNIDWFKSNQSWDLNNGDQ 409
             +P+ L  RL++ +Y   H   +  +  +  S A WRSII   +         + +G  
Sbjct: 78  IHQPHTLLSRLLRSRY-FPHSSMMECSVGTRPSYA-WRSIIHGRELLSRGLLRTIGDGIH 137

Query: 410 ISFWYSNW 417
              W   W
Sbjct: 138 TKVWLDRW 143

[Close]
BLAST of MELO3C008377 vs. TAIR10
Match: AT4G20520.1 (AT4G20520.1 RNA binding;RNA-directed DNA polymerases)

HSP 1 Score: 53.5 bits (127), Expect = 4.1e-07
Identity = 30/78 (38.46%), Postives = 41/78 (52.56%), Query Frame = 1 

Query: 57  RLKTTLPGTISGNQLAFIKNRQITDAILMANEAVDYWKVKK-IKGF-ILKLDIEKVFYNL 116
           RLK  +   I   Q +FI  R  TD I+   EAV   + KK +KG+ +LKLD+EK +  +
Sbjct: 4   RLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAYDRI 63

Query: 117 NWDFIDYVLGKKNFPNSW 133
            WD+++  L    FP  W
Sbjct: 64  RWDYLEDTLISAGFPEVW 81

[Close]
BLAST of MELO3C008377 vs. NCBI nr
Match: gi|659068893|ref|XP_008446987.1| (PREDICTED: uncharacterized protein LOC103489530 [Cucumis melo])

HSP 1 Score: 776.5 bits (2004), Expect = 2.6e-221
Identity = 389/479 (81.21%), Postives = 407/479 (84.97%), Query Frame = 1 

Query: 5   KDFFEKGVINKNMNNTYIALIGKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPG 64
           KDF++KGVINKNMNNTYIALI KKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLP 
Sbjct: 9   KDFYDKGVINKNMNNTYIALISKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPD 68

Query: 65  TISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGFILKLDIEKVFYNLNWDFIDYVLG 124
           TISG QLAF+KNRQITDAILMANEAVDYWKVKKIKGFILKLDIEK F NLNWDFID+VL 
Sbjct: 69  TISGKQLAFVKNRQITDAILMANEAVDYWKVKKIKGFILKLDIEKAFDNLNWDFIDFVLE 128

Query: 125 KKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDYFSRL 184
           KKNFPN WRKWI+GCISNVTYSVI+NGRPQGRIKANRGLRQGDPLSPFLFVIAMDY SRL
Sbjct: 129 KKNFPNLWRKWIKGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRL 188

Query: 185 LSHLEASGAIKGVSLNNNCNISHILFADDILLFVEDNDCFLNNLIMALSLFEKASGLKIN 244
           LSHLE+SGAIKGVSLN+NCNISHILFA DILLF+EDNDCFLNNL MALSLFE+ASGLKIN
Sbjct: 189 LSHLESSGAIKGVSLNSNCNISHILFAYDILLFIEDNDCFLNNLRMALSLFERASGLKIN 248

Query: 245 LLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLGAPSSTCKNIEKSWRNFLWKG 304
           LLKSA                               VP+    +  K     W      G
Sbjct: 249 LLKSA------------------------------LVPVNVSLNRAKECASFW------G 308

Query: 305 SNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALLSKWLWRYFSEPNALWRRLIQCKY 364
           +NGS+GS+LINWTKVFKSKEEGGLGISRL VTNKALLSKWLW Y SEPNALWRRLIQCKY
Sbjct: 309 NNGSEGSYLINWTKVFKSKEEGGLGISRLHVTNKALLSKWLWCYLSEPNALWRRLIQCKY 368

Query: 365 KGKHPGDIPSNNSSSSSKAPWRSIIDNIDWFKSNQSWDLNNGDQISFWYSNWSQEGCLST 424
           KG +PGDIPSN SSS+SKAPWRSIIDNIDWFKSNQSW+LNNGDQISFWYSNWSQEG LST
Sbjct: 369 KGNYPGDIPSNISSSTSKAPWRSIIDNIDWFKSNQSWELNNGDQISFWYSNWSQEGHLST 428

Query: 425 AYPRLFALTLDKEISVKDAWNTIDNQWAINFRRELNDRERCNWEKILEILPTPRPNRGS 484
           AYPRLFALTL KEISVKDAWNT DNQW I FRRELNDRERC W KILEILPTPR NR S
Sbjct: 429 AYPRLFALTLGKEISVKDAWNTFDNQWNIIFRRELNDRERCKWAKILEILPTPRSNRRS 451

[Close]
BLAST of MELO3C008377 vs. NCBI nr
Match: gi|659086627|ref|XP_008444035.1| (PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo])

HSP 1 Score: 364.8 bits (935), Expect = 2.4e-97
Identity = 173/200 (86.50%), Postives = 180/200 (90.00%), Query Frame = 1 

Query: 285 APSSTCKNIEKSWRNFLWKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALLSKW 344
           APS TCKNIEKSWR FLWKG+NG +GSHLINWTKV KSKEEGGLGISRL VTNKALL+KW
Sbjct: 72  APSLTCKNIEKSWRKFLWKGNNGIEGSHLINWTKVSKSKEEGGLGISRLHVTNKALLTKW 131

Query: 345 LWRYFSEPNALWRRLIQCKYKGKHPGDIPSNNSSSSSKAPWRSIIDN-IDWFKSNQSWDL 404
           LWRY SEPNALWR LIQCKYKG +PGDIPSN SSS+SKAPWRSIIDN IDWFKSNQSW L
Sbjct: 132 LWRYLSEPNALWRSLIQCKYKGNYPGDIPSNISSSTSKAPWRSIIDNIIDWFKSNQSWKL 191

Query: 405 NNGDQISFWYSNWSQEGCLSTAYPRLFALTLDKEISVKDAWNTIDNQWAINFRRELNDRE 464
           NNGDQISFWYSNWS EG LSTAYPRLFALTLDKEISVKDAWNT DN+W I FRRELNDRE
Sbjct: 192 NNGDQISFWYSNWSLEGRLSTAYPRLFALTLDKEISVKDAWNTFDNKWNIIFRRELNDRE 251

Query: 465 RCNWEKILEILPTPRPNRGS 484
           R  W KILEILP+PR NRGS
Sbjct: 252 RSKWAKILEILPSPRSNRGS 271

[Close]
BLAST of MELO3C008377 vs. NCBI nr
Match: gi|659131345|ref|XP_008465637.1| (PREDICTED: putative ribonuclease H protein At1g65750, partial [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 4.5e-96
Identity = 183/254 (72.05%), Postives = 198/254 (77.95%), Query Frame = 1 

Query: 230 MALSLFEKASGLKINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLGAPSST 289
           MALSLFE+ASGLKINLL+SALVPVNVS+NR                           +  
Sbjct: 1   MALSLFERASGLKINLLESALVPVNVSVNR---------------------------AKD 60

Query: 290 CKNIEKSWRNFLWKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALLSKWLWRYF 349
           C +        LW G+NG++GSHLINWTKV KSKEEGGLGI RL VTNKALL+KWLWRY 
Sbjct: 61  CAS--------LW-GNNGTEGSHLINWTKVSKSKEEGGLGILRLHVTNKALLTKWLWRYL 120

Query: 350 SEPNALWRRLIQCKYKGKHPGDIPSNNSSSSSKAPWRSIIDNIDWFKSNQSWDLNNGDQI 409
           SEP ALWR LI+CKYKG +PGDIPSN SSS+SKAPWRSIIDNIDWFKSNQSW+LNNGDQI
Sbjct: 121 SEPKALWRSLIECKYKGNYPGDIPSNISSSTSKAPWRSIIDNIDWFKSNQSWELNNGDQI 180

Query: 410 SFWYSNWSQEGCLSTAYPRLFALTLDKEISVKDAWNTIDNQWAINFRRELNDRERCNWEK 469
           SFWYSNWS EG LSTAYPRLFALTLDKEISVKDAWNT DN+W I FRRELNDRER  W K
Sbjct: 181 SFWYSNWSLEGRLSTAYPRLFALTLDKEISVKDAWNTFDNKWNIIFRRELNDRERSKWAK 218

Query: 470 ILEILPTPRPNRGS 484
           ILEILP+PR NRGS
Sbjct: 241 ILEILPSPRSNRGS 218

[Close]
BLAST of MELO3C008377 vs. NCBI nr
Match: gi|147801861|emb|CAN65957.1| (hypothetical protein VITISV_035610 [Vitis vinifera])

HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93
Identity = 189/475 (39.79%), Postives = 272/475 (57.26%), Query Frame = 1 

Query: 3    IFKDFFEKGVINKNMNNTYIALIGKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTL 62
            +F +F   G+IN++ N ++I L+ KK       ++RPISL TS+YKIIAK L  RL+  L
Sbjct: 934  VFDEFHRSGIINQSTNASFIVLLPKKSMAKKISBYRPISLITSLYKIIAKVLXGRLRGIL 993

Query: 63   PGTISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGFILKLDIEKVFYNLNWDFIDYV 122
              TI   Q AF++ RQI DA+L+ANE VD  K    +G + K+D EK + +++WDF+D+V
Sbjct: 994  HETIHSTQGAFVQGRQILDAVLIANEIVDEKKRSGXEGVVFKIDFEKAYDHVSWDFLDHV 1053

Query: 123  LGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDYFS 182
            + KK F   WRKWIRGC+S+V++++++NG  +G +KA+RGLRQGDPLSPFLF I  D  S
Sbjct: 1054 MEKKGFNPKWRKWIRGCLSSVSFAILVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLS 1113

Query: 183  RLLSHLEASGAIKGVSL-NNNCNISHILFADDILLFVEDNDCFLNNLIMALSLFEKASGL 242
            R+L   E     +G  +  N   +SH+ FADD + F    +  L  L   L +F   SGL
Sbjct: 1114 RMLLRAEERNVFEGFRVGRNRTRVSHLQFADDTIFFXSTREEDLLTLKSVLVVFGHISGL 1173

Query: 243  KINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLGAPSSTCKNIEKSWRNFL 302
            K+NL KS +  +N+  +     A           + YLG+PLG    + + IE+  R+FL
Sbjct: 1174 KVNLDKSNIYGINLGQDHLHRLAKLLDCKASGWPILYLGLPLGGNPKSGR-IERLQRDFL 1233

Query: 303  WKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALLSKWLWRYFSEPNALWRRLIQ 362
            W G    K  HL++W  V KSK +GGLG+ R+ + N ALL KWLWRY  E +ALW ++I 
Sbjct: 1234 WSGVGEGKRDHLVSWDVVCKSKMKGGLGLGRISLRNSALLGKWLWRYPKEGSALWHQVIL 1293

Query: 363  CKYKGKHPGDIPSNNSSS-SSKAPWRSIIDNIDWFKSNQSWDLNNGDQISFWYSNWSQEG 422
              Y G H     +N     S + PW++I      F     + + +GD+I FW   W  + 
Sbjct: 1294 SIY-GSHSNGWDANTVVRWSHRCPWKAIAQVFQDFSKFTRFMVGDGDRIRFWEDLWWGDQ 1353

Query: 423  CLSTAYPRLFALTLDKEISVKD-AWNTIDNQWAINFRRELNDRERCNWEKILEIL 475
             L   +PRL  + +DK I +     +T    W  NFRR L+D E    E +++ L
Sbjct: 1354 SLGVRFPRLLRVVMDKNIPISSILGSTRPFSWNFNFRRNLSDSEIEEVESLMQSL 1406

[Close]
BLAST of MELO3C008377 vs. NCBI nr
Match: gi|147864302|emb|CAN78803.1| (hypothetical protein VITISV_032700 [Vitis vinifera])

HSP 1 Score: 345.5 bits (885), Expect = 1.5e-91
Identity = 190/477 (39.83%), Postives = 263/477 (55.14%), Query Frame = 1 

Query: 3   IFKDFFEKGVINKNMNNTYIALIGKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTL 62
           +F +F   GVIN++ N ++I LI KK       DFRPISL TS+YKIIAK LS RL+  L
Sbjct: 303 VFAEFHRSGVINQSTNASFIVLIPKKSLSKRISDFRPISLITSLYKIIAKVLSGRLRGVL 362

Query: 63  PGTISGNQLAFIKNRQITDAILMANEAVDYWKVKKIKGFILKLDIEKVFYNLNWDFIDYV 122
             TI   Q AF++ RQI DA+L+ANE VD  +    +G + K+D EK + ++ WDF+D+V
Sbjct: 363 HQTIHYTQGAFVQGRQILDAVLIANEIVDERRRSGEEGVVFKIDFEKAYDHVKWDFLDHV 422

Query: 123 LGKKNFPNSWRKWIRGCISNVTYSVIINGRPQGRIKANRGLRQGDPLSPFLFVIAMDYFS 182
           L KK F   WRKW+ GC+S+V+Y++++NG  +G +KA+RGLRQGDPLSPFLF +  D  S
Sbjct: 423 LEKKGFSPRWRKWMSGCLSSVSYAILVNGSAKGWVKASRGLRQGDPLSPFLFTLVADVLS 482

Query: 183 RLLSHLEASGAIKGVSLN-NNCNISHILFADDILLFVEDNDCFLNNLIMALSLFEKASGL 242
           R++   E    ++G  +  N   +SH+ FADD + F    +  L  L   L +F   SGL
Sbjct: 483 RMIMRAEERNMMEGFRVGXNRTRVSHLQFADDTIFFSNSREEXLQTLKSLLLVFGHISGL 542

Query: 243 KINLLKSALVPVNVSLNRAKECASFWGISCHSLLLSYLGVPLGAPSSTC----------- 302
           K+NL KS++  +N+        A           + YLG+PLG     C           
Sbjct: 543 KVNLNKSSIYGINLDQALLSRLAEMLDXKASGWPILYLGLPLGGNPKACGFWDPVVERIS 602

Query: 303 --KNIEKSWRNFLWKGSNGSKGSHLINWTKVFKSKEEGGLGISRLQVTNKALLSKWLWRY 362
               IE+  R+FLW G    K  HL+ W  V K K  GGLG+  +   N ALL KWLWRY
Sbjct: 603 MAAKIERLQRDFLWSGFGEGKRDHLVRWDVVCKPKTIGGLGLGNISWRNLALLGKWLWRY 662

Query: 363 FSEPNALWRRLIQCKYKGKHPGDIPSNNSSS-SSKAPWRSIIDNIDWFKSNQSWDLNNGD 422
             E +ALW ++I   Y G H     +N     S + PW++I      F     + + NG+
Sbjct: 663 PREGSALWHQVILSIY-GSHSNGWDANTLVRWSHRCPWKAIAQVFQGFSLITRYVVGNGE 722

Query: 423 QISFWYSNWSQEGCLSTAYPRLFALTLDKEISVKDAWN-TIDNQWAINFRRELNDRE 464
           +I FW   W  +  L   YPRLF + +DK IS+      +    W +NFRR L+D E
Sbjct: 723 RIRFWEDLWWGDQPLGIQYPRLFRVVVDKNISISSVLGPSRPFLWNLNFRRNLSDYE 778

The following BLAST results are available for this feature:
BLAST of MELO3C008377 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LORF2_HUMAN5.1e-2328.77LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1[more]
LORF2_MOUSE6.8e-2026.35LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2[more]
YTX2_XENLA1.6e-1626.86Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=3 SV=1[more]
RNHX1_ARATH3.5e-1635.56Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 P... [more]
PO22_POPJA5.1e-1527.35Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra... [more]
BLAST of MELO3C008377 vs. TrEMBL
Match NameE-valueIdentityDescription
A5BSZ3_VITVI8.5e-9439.79Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035610 PE=4 SV=1[more]
A5BA26_VITVI1.0e-9139.83Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032700 PE=4 SV=1[more]
A5C4L0_VITVI3.3e-9037.60Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014001 PE=4 SV=1[more]
A5B2E0_VITVI2.8e-8937.71Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029931 PE=4 SV=1[more]
A5BX70_VITVI1.1e-8536.96Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011015 PE=4 SV=1[more]
BLAST of MELO3C008377 vs. TAIR10
Match NameE-valueIdentityDescription
ATMG01250.11.5e-1249.25ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)[more]
AT4G29090.19.5e-1228.24 Ribonuclease H-like superfamily protein[more]
ATMG00310.16.4e-0828.13ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family p... [more]
AT4G20520.14.1e-0738.46 RNA binding;RNA-directed DNA polymerases[more]
BLAST of MELO3C008377 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659068893|ref|XP_008446987.1|2.6e-22181.21PREDICTED: uncharacterized protein LOC103489530 [Cucumis melo][more]
gi|659086627|ref|XP_008444035.1|2.4e-9786.50PREDICTED: putative ribonuclease H protein At1g65750 [Cucumis melo][more]
gi|659131345|ref|XP_008465637.1|4.5e-9672.05PREDICTED: putative ribonuclease H protein At1g65750, partial [Cucumis melo][more]
gi|147801861|emb|CAN65957.1|1.2e-9339.79hypothetical protein VITISV_035610 [Vitis vinifera][more]
gi|147864302|emb|CAN78803.1|1.5e-9139.83hypothetical protein VITISV_032700 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008377T1MELO3C008377T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 27..281
score: 3.8
IPR000477Reverse transcriptase domainPROFILEPS50878RT_POLcoord: 6..283
score: 15
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 1..283
score: 2.2
NoneNo IPR availablePANTHERPTHR19446:SF368SUBFAMILY NOT NAMEDcoord: 1..283
score: 2.2
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 33..253
score: 5.45

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008377Cucurbita maxima (Rimu)cmameB268
MELO3C008377Cucurbita maxima (Rimu)cmameB680
MELO3C008377Cucurbita moschata (Rifu)cmomeB259
MELO3C008377Cucurbita moschata (Rifu)cmomeB672
MELO3C008377Watermelon (Charleston Gray)mewcgB301
MELO3C008377Watermelon (97103) v1mewmB309
MELO3C008377Cucurbita pepo (Zucchini)cpemeB168
MELO3C008377Cucurbita pepo (Zucchini)cpemeB401
MELO3C008377Bottle gourd (USVL1VR-Ls)lsimeB475
MELO3C008377Cucumber (Gy14) v2cgybmeB410
MELO3C008377Silver-seed gourdcarmeB0066
MELO3C008377Silver-seed gourdcarmeB0824
MELO3C008377Watermelon (97103) v2mewmbB308
MELO3C008377Wax gourdmewgoB323