MELO3C008226 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCTACTTACACTGATCTTTGGTTCCAGGGAAGGAGATGTATCGTTGCCGCAAATTCCTGCTAAGTATTTGAGAATAAAGTAAACTCAGTTTTAACACTCGTTCAATATAGACACCCCCTACTTATTCTTATTTTAGATGTCAAGTAATTTTATCATATATTACTAAGGTGTATACAAGCACCTTTCATGTCTATTTCTTTCAGCCTAACTAAAAGTTTCTCCATGACTTTTGTAAATGGTTATTATTTTTTATCTTAGACCAAGAAGTCTCAATTATACCTTTGCTTGCACACATCGTGTACGTGAGAAAATTGATACTTAAACTGTTTGTAGAAGTGCCATCGTTGATAATAAACCCTGCTAATTTCTTCGCTCCTCACTCTGAATGTTTGGATTTGTAAAACCACCATTGTTGATGCTTAGACCATGTTAACTTCTTCGCTTGGTGCTCTGTGCGTTTGGGTTTGTAAAAACACCATTGTTAAGACTTAAATCCGCACTAAGTTATTTGATTGTTACTCTGGACGTTTGGGTTTTTAAAAATACCATTCTTGACTAGGAGTTCATTCAAAGTATATATTGTTATATTTTTAGTTTTTTTCACAGGGGCAGAAACTTGCCAATATCATTTGTCCAGAAGTACCTTATGAGAAAGCTGGATCACCCAAGTGAATCGGAGGTGAAAACAAAATCTCATATTCTTTAGTTTAATTGAAACTCTAATCTAAGAGCCTTTCCTGTTCATACTTGGACTTGTCATTTTATGTCTTATGTTTGTGGATTTATATTTGCAGGTTGAAGTCAAGCATATGGGACATCCAGTAGTTCACACACTAGATTTGCATAGTTTAGTTGATTTGTGGCTATAA ATGCCTCTACTTACACTGATCTTTGGTTCCAGGGAAGGAGATGTATCGTTGCCGCAAATTCCTGCTAAGTATTTGAGAATAAAGGGCAGAAACTTGCCAATATCATTTGTCCAGAAGTACCTTATGAGAAAGCTGGATCACCCAAGTGAATCGGAGGTTGAAGTCAAGCATATGGGACATCCAGTAGTTCACACACTAGATTTGCATAGTTTAGTTGATTTGTGGCTATAA ATGCCTCTACTTACACTGATCTTTGGTTCCAGGGAAGGAGATGTATCGTTGCCGCAAATTCCTGCTAAGTATTTGAGAATAAAGGGCAGAAACTTGCCAATATCATTTGTCCAGAAGTACCTTATGAGAAAGCTGGATCACCCAAGTGAATCGGAGGTTGAAGTCAAGCATATGGGACATCCAGTAGTTCACACACTAGATTTGCATAGTTTAGTTGATTTGTGGCTATAA MPLLTLIFGSREGDVSLPQIPAKYLRIKGRNLPISFVQKYLMRKLDHPSESEVEVKHMGHPVVHTLDLHSLVDLWL*
BLAST of MELO3C008226 vs. Swiss-Prot
Match: DRIP2_ARATH (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana GN=DRIP2 PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 2.4e-20 Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 1
BLAST of MELO3C008226 vs. Swiss-Prot
Match: DRIP1_ARATH (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana GN=DRIP1 PE=1 SV=2) HSP 1 Score: 87.0 bits (214), Expect = 9.5e-17 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 1
BLAST of MELO3C008226 vs. Swiss-Prot
Match: DRIPH_ARATH (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana GN=At3g23060 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 3.1e-07 Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1
BLAST of MELO3C008226 vs. TrEMBL
Match: A0A0A0LIE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G224300 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 2.1e-26 Identity = 63/73 (86.30%), Postives = 66/73 (90.41%), Query Frame = 1
BLAST of MELO3C008226 vs. TrEMBL
Match: D7LC67_ARALL (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_902047 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 5.4e-19 Identity = 47/67 (70.15%), Postives = 57/67 (85.07%), Query Frame = 1
BLAST of MELO3C008226 vs. TrEMBL
Match: A0A078E9W1_BRANA (BnaC04g41320D protein OS=Brassica napus GN=BnaC04g41320D PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 2.7e-18 Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 1
BLAST of MELO3C008226 vs. TrEMBL
Match: A0A078GWX9_BRANA (BnaA04g17680D protein OS=Brassica napus GN=BnaA04g17680D PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 2.7e-18 Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 1
BLAST of MELO3C008226 vs. TrEMBL
Match: M4DYQ5_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 2.7e-18 Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 1
BLAST of MELO3C008226 vs. TAIR10
Match: AT2G30580.1 (AT2G30580.1 DREB2A-interacting protein 2) HSP 1 Score: 99.0 bits (245), Expect = 1.4e-21 Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 1
BLAST of MELO3C008226 vs. TAIR10
Match: AT1G06770.1 (AT1G06770.1 DREB2A-interacting protein 1) HSP 1 Score: 87.0 bits (214), Expect = 5.4e-18 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 1
BLAST of MELO3C008226 vs. TAIR10
Match: AT3G23060.1 (AT3G23060.1 RING/U-box superfamily protein) HSP 1 Score: 55.5 bits (132), Expect = 1.7e-08 Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1
BLAST of MELO3C008226 vs. NCBI nr
Match: gi|659081538|ref|XP_008441383.1| (PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis melo]) HSP 1 Score: 157.5 bits (397), Expect = 9.2e-36 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1
BLAST of MELO3C008226 vs. NCBI nr
Match: gi|449455272|ref|XP_004145377.1| (PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis sativus]) HSP 1 Score: 125.9 bits (315), Expect = 3.0e-26 Identity = 63/73 (86.30%), Postives = 66/73 (90.41%), Query Frame = 1
BLAST of MELO3C008226 vs. NCBI nr
Match: gi|659096902|ref|XP_008449348.1| (PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis melo]) HSP 1 Score: 124.4 bits (311), Expect = 8.6e-26 Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 1
BLAST of MELO3C008226 vs. NCBI nr
Match: gi|923648257|ref|XP_013643578.1| (PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X1 [Brassica napus]) HSP 1 Score: 101.7 bits (252), Expect = 6.0e-19 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 1
BLAST of MELO3C008226 vs. NCBI nr
Match: gi|685300724|ref|XP_009141080.1| (PREDICTED: E3 ubiquitin protein ligase DRIP2 isoform X1 [Brassica rapa]) HSP 1 Score: 101.7 bits (252), Expect = 6.0e-19 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |