MELO3C008157 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTAACTTTAAAATTTAAAAAAAAAAAAAGGGGAAAAACCCTACTACGCGCTCTCCTCCCTTTTACTTTTGTTTGATTTTTCCGTCGCCGATCATTATAGTCAAGCCCTACGCGACTTCGATTTCTTTCTCTGCTCTCGCATCACCCTCGCAGCGGTAGGTTCGCGCCGATTGTTTCTTCTCTCTTATCCTTCCGCCGTCGCAGTCGCCGGTCGTCGGCACATCCTCACCACCACTTTTCCTTATTCTCATTATTCCGTTGATGGTTGTTTCTTACTTGTGTGAGCAATAATTGGTTTGCAGGAAGATTTTTGAAGTTTCACTCATGGATCCTCAACCCGAACCAGTCAGCTACATCTGTGGAGGTATAACTGTTGTGTGTTTACTGATTTCGGGATTGAATATCTCCCGCTGATTATTTAGGTTCTTTCGTTATGTTATCGGATGCATCTTTTAACATGTGTTAAGTTACTTTGATTAATTAAAACTGTGGGAATTTAGAAGTTTTTTTGGTTTGAGTCTACATTTAGAATACTTGCTCTAAATATACTCCTTTTCGACTATGTTTGGGAATTGAGAGATGTAAAATTTGTGTAGATTGTGGAATGGAGAACACTCTGAAGCAGGGTGATGTTATACAGTGCCGGGAGTGTGGTTATCGTATTCTCTACAAGAAGCGCACCCGTCGCAGTAAGATATTTCTTCTGATTTTGTTTGTTGTTATTATTAAATTAATTGAACATGAATATGTCGTCTGTAAATATGAATTTTCTGTTAAAGATGTTTGGAATTTTGAATCTCATCCAATAAGTTACGATTGATTATAAATTTTATATGGAACAAGAAACATAGATGAGCTATTTAGTATGAGTAGATAATGAAGAAGTGTAACACATGTGGGTCAAACTCTGCGACTGGTGGCTTTGGCTGATTTTGCATCTAGGCATGGCTGGGAGGTTATCATTTTATCATCTTCGAAGATCACTCCAAAACATGTTTTGCTCAACCAAAATCAATTTGACTGTATGAAAGTCACATTTAAAAGAATTAAATCGAAAGGTAAATTGATTTTGAACTATAAAGACTTGTTTTGGAGTGCTCTTGAGCTCACCAGAAGTGACTTTAACTCTATCAAAATCATCTTCTTGTGTCGAGAACTCTATATCCACTTCACTACTTCACATGAGTTGATGATCGGCTACGTTTTTGCTACTTTTTTTCTGTTTTAAAATCATTTGATCACTCTATAACATCCATGCTCAATGCTGTTTTCTTCCCAGTCAAATCTTATTTACCTTCTTTAAATAGTTCATTTGAAGATTCGAGTAATGGGTAATCTAAAACAACTATTTTATTGACTTAGTTTGTTTTGAAGTTTAGAGCTTGCACATATATCCAACTGTTGATTGGCAGGATGGTTGTAGTTTGGGCAATATACTGTCACAACATGATGTAATTCAGCAGAATCTATTATACTTGACCTATGGTGATAATTGACTGGAAAATTTGTTTCTTGGGGTATCCTTGTGATCTTTTATGACTTGGAATGCTCTCTTACTACAAGTCTTGTGATCAAATTTAGATTCTCTTTATGGATGTTAGAGTCTTTCTTGTAGTTTAGTTTTTTCAATGTTTTTGTTGTATGGGTCAATTTGCATTACTTTCTGTGTCCTTGATATTTATTTGTTTCTTTCCAAATTTGAACTCTAATCCAATTCTTGCCTATTACTGCAGTTGTTCAGTACGAAGCCCGCTGAAATGCTTATTCTTGCGATGGACTTCTAGTATCATGCATATTTTGTAAGTTTCTTTTAGGAAAACAAAAACGATACTCGATATGGACTAAGGACTTGCTGTAGTACAAAACATGTTGATAACGCTGCTTAAATATTTTTCATTATCCTCTTGTGCTAACTCCATATCCAACTGATAATATGAATGAATGGTTTATCTCTTGATAGACTGGATGGTTCAGTTTTGCATTTCCA ATTTTAACTTTAAAATTTAAAAAAAAAAAAAGGGGAAAAACCCTACTACGCGCTCTCCTCCCTTTTACTTTTGTTTGATTTTTCCGTCGCCGATCATTATAGTCAAGCCCTACGCGACTTCGATTTCTTTCTCTGCTCTCGCATCACCCTCGCAGCGGAAGATTTTTGAAGTTTCACTCATGGATCCTCAACCCGAACCAGTCAGCTACATCTGTGGAGATTGTGGAATGGAGAACACTCTGAAGCAGGGTGATGTTATACAGTGCCGGGAGTGTGGTTATCGTATTCTCTACAAGAAGCGCACCCGTCGCATTGTTCAGTACGAAGCCCGCTGAAATGCTTATTCTTGCGATGGACTTCTAGTATCATGCATATTTTGTAAGTTTCTTTTAGGAAAACAAAAACGATACTCGATATGGACTAAGGACTTGCTGTAGTACAAAACATGTTGATAACGCTGCTTAAATATTTTTCATTATCCTCTTGTGCTAACTCCATATCCAACTGATAATATGAATGAATGGTTTATCTCTTGATAGACTGGATGGTTCAGTTTTGCATTTCCA ATGGATCCTCAACCCGAACCAGTCAGCTACATCTGTGGAGATTGTGGAATGGAGAACACTCTGAAGCAGGGTGATGTTATACAGTGCCGGGAGTGTGGTTATCGTATTCTCTACAAGAAGCGCACCCGTCGCATTGTTCAGTACGAAGCCCGCTGA MDPQPEPVSYICGDCGMENTLKQGDVIQCRECGYRILYKKRTRRIVQYEAR*
BLAST of MELO3C008157 vs. Swiss-Prot
Match: NRPBC_ARATH (DNA-directed RNA polymerases II, IV and V subunit 12 OS=Arabidopsis thaliana GN=NRPB12 PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 2.3e-22 Identity = 45/51 (88.24%), Postives = 46/51 (90.20%), Query Frame = 1
BLAST of MELO3C008157 vs. Swiss-Prot
Match: RPAB4_BOVIN (DNA-directed RNA polymerases I, II, and III subunit RPABC4 OS=Bos taurus GN=POLR2K PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.3e-12 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1
BLAST of MELO3C008157 vs. Swiss-Prot
Match: RPAB4_HUMAN (DNA-directed RNA polymerases I, II, and III subunit RPABC4 OS=Homo sapiens GN=POLR2K PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.3e-12 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1
BLAST of MELO3C008157 vs. Swiss-Prot
Match: RPAB4_MOUSE (DNA-directed RNA polymerases I, II, and III subunit RPABC4 OS=Mus musculus GN=Polr2k PE=3 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 1.3e-12 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1
BLAST of MELO3C008157 vs. Swiss-Prot
Match: RPAB4_SCHPO (DNA-directed RNA polymerases I, II, and III subunit RPABC4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpc10 PE=1 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 3.7e-12 Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 1
BLAST of MELO3C008157 vs. TrEMBL
Match: A0A0A0LQM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043180 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 9.3e-23 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1
BLAST of MELO3C008157 vs. TrEMBL
Match: A0A022RDU6_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a017594mg PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 3.5e-22 Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 1
BLAST of MELO3C008157 vs. TrEMBL
Match: V7C304_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G138700g PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 4.6e-22 Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 1
BLAST of MELO3C008157 vs. TrEMBL
Match: A0A067GN92_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035461mg PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 4.6e-22 Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 1
BLAST of MELO3C008157 vs. TrEMBL
Match: V4UBY9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017429mg PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 4.6e-22 Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 1
BLAST of MELO3C008157 vs. TAIR10
Match: AT5G41010.1 (AT5G41010.1 DNA directed RNA polymerase, 7 kDa subunit) HSP 1 Score: 105.1 bits (261), Expect = 1.3e-23 Identity = 45/51 (88.24%), Postives = 46/51 (90.20%), Query Frame = 1
BLAST of MELO3C008157 vs. TAIR10
Match: AT1G53690.1 (AT1G53690.1 DNA directed RNA polymerase, 7 kDa subunit) HSP 1 Score: 68.9 bits (167), Expect = 1.0e-12 Identity = 30/41 (73.17%), Postives = 32/41 (78.05%), Query Frame = 1
BLAST of MELO3C008157 vs. NCBI nr
Match: gi|1000949640|ref|XP_015579873.1| (PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 12 [Ricinus communis]) HSP 1 Score: 113.2 bits (282), Expect = 1.3e-22 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1
BLAST of MELO3C008157 vs. NCBI nr
Match: gi|848871798|ref|XP_012836463.1| (PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 12 [Erythranthe guttata]) HSP 1 Score: 111.3 bits (277), Expect = 5.1e-22 Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 1
BLAST of MELO3C008157 vs. NCBI nr
Match: gi|356531072|ref|XP_003534102.1| (PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 12 [Glycine max]) HSP 1 Score: 110.9 bits (276), Expect = 6.7e-22 Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 1
BLAST of MELO3C008157 vs. NCBI nr
Match: gi|731422679|ref|XP_010662206.1| (PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 12 [Vitis vinifera]) HSP 1 Score: 109.0 bits (271), Expect = 2.5e-21 Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 1
BLAST of MELO3C008157 vs. NCBI nr
Match: gi|672184844|ref|XP_008812669.1| (PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 12 [Phoenix dactylifera]) HSP 1 Score: 108.6 bits (270), Expect = 3.3e-21 Identity = 49/51 (96.08%), Postives = 49/51 (96.08%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|