MELO3C007910 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007910
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Cysteine-rich receptor-like protein kinase 26
Location	chr8 : 6199161 .. 6199352 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGGTGGTTTTGATGCTGAGTAGTTTCTCTCTCACTCTCTCCGTGCCCTCCGACCCGGCATTCTTTATGCACAGTAATATTGAAGAATCTAACAGTGTGGTAAAACCAAATGGTGGTCATATGAAAAGCACATCTCTTGAGCCATCACTCAATGAAGTTTCAATTACTGAGCTCCGACCTCGCTAG

mRNA sequence

ATGGCTTCGGTGGTTTTGATGCTGAGTAGTTTCTCTCTCACTCTCTCCGTGCCCTCCGACCCGGCATTCTTTATGCACAGTAATATTGAAGAATCTAACAGTGTGGTAAAACCAAATGGTGGTCATATGAAAAGCACATCTCTTGAGCCATCACTCAATGAAGTTTCAATTACTGAGCTCCGACCTCGCTAG

Coding sequence (CDS)

ATGGCTTCGGTGGTTTTGATGCTGAGTAGTTTCTCTCTCACTCTCTCCGTGCCCTCCGACCCGGCATTCTTTATGCACAGTAATATTGAAGAATCTAACAGTGTGGTAAAACCAAATGGTGGTCATATGAAAAGCACATCTCTTGAGCCATCACTCAATGAAGTTTCAATTACTGAGCTCCGACCTCGCTAG

Protein sequence

MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITELRPR*

Homology

[Close]

BLAST of MELO3C007910 vs. TrEMBL
Match: A0A0A0KMG4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505980 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.7e-21
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 1


Query: 1  MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITEL 60
          MASVVLML+S S TLSVPS+PAFFMHSNIEE+N+VVKPN GHMKSTSLEPS+NEVSIT L
Sbjct: 1  MASVVLMLNSSSFTLSVPSEPAFFMHSNIEEANNVVKPNDGHMKSTSLEPSVNEVSITVL 60

Query: 61 RPR 64
          RPR
Sbjct: 61 RPR 63

[Close]

BLAST of MELO3C007910 vs. TrEMBL
Match: Q8VX50_SOLTU (Putative receptor-like serine-threonine protein kinase OS=Solanum tuberosum GN=prk-4 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 5.5e-09
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 1


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSN-------IEESNSVVKPNGGHMKSTSLEPSLN 60
           MA+VVLMLSSFSL+L +PS PAF+MHSN       I+E N+ V  +   +KS S+  S N
Sbjct: 607 MAAVVLMLSSFSLSLPMPSGPAFYMHSNITAGTSLIQEYNTRVTDSSERVKSKSIGSSRN 666

Query: 61  EVSITELRPR 64
           E SITEL PR
Sbjct: 667 EASITELYPR 676

[Close]

BLAST of MELO3C007910 vs. TrEMBL
Match: A0A0D2RZ61_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G084500 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 9.4e-09
Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 1


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEP-SLNEVSITE 60
           MASV LML+SFS TL+VPS PAF M SN E   S+  P+  +  ST L P S NEV+I+E
Sbjct: 611 MASVALMLNSFSTTLAVPSQPAFLMQSNFESEGSLSFPSTSNKSSTELPPLSRNEVTISE 670

Query: 61  LRPR 64
           L PR
Sbjct: 671 LSPR 674

[Close]

BLAST of MELO3C007910 vs. TrEMBL
Match: A0A0D2NNQ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G084500 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 9.4e-09
Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 1


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEP-SLNEVSITE 60
           MASV LML+SFS TL+VPS PAF M SN E   S+  P+  +  ST L P S NEV+I+E
Sbjct: 566 MASVALMLNSFSTTLAVPSQPAFLMQSNFESEGSLSFPSTSNKSSTELPPLSRNEVTISE 625

Query: 61  LRPR 64
           L PR
Sbjct: 626 LSPR 629

[Close]

BLAST of MELO3C007910 vs. TrEMBL
Match: Q8VX51_SOLTU (Putative receptor-like serine-threonine protein kinase OS=Solanum tuberosum GN=prk-3 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 9.4e-09
Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 1


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSN-------IEESNSVVKPNGGHMKSTSLEPSLN 60
           MA+VVLMLSSFSL+L +PS PAF+MHSN       I+E N+ V  +    KS S+  S N
Sbjct: 582 MAAVVLMLSSFSLSLPMPSGPAFYMHSNITAGTSLIQEYNTRVTDSSERAKSKSIGSSRN 641

Query: 61  EVSITELRPR 64
           E SITEL PR
Sbjct: 642 EASITELYPR 651

[Close]

BLAST of MELO3C007910 vs. TAIR10
Match: AT4G38830.1 (AT4G38830.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 26)

HSP 1 Score: 46.2 bits (108), Expect = 8.7e-06
Identity = 32/64 (50.00%), Postives = 37/64 (57.81%), Query Frame = 1


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSN-IEESNSVVKPNGGHMKSTSLEPSLNEVSITE 60
           MASVVLML   ++ LS PS PAFF HSN + +S+S +    GH   TS     N  S TE
Sbjct: 611 MASVVLMLDGHTIALSEPSKPAFFSHSNAVSDSSSSL----GHNAKTS-----NYNSNTE 665

Query: 61  LRPR 64
           L PR
Sbjct: 671 LYPR 665

[Close]

BLAST of MELO3C007910 vs. NCBI nr
Match: gi|700193717|gb|KGN48921.1| (hypothetical protein Csa_6G505980 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 5.3e-21
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 1


Query: 1  MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITEL 60
          MASVVLML+S S TLSVPS+PAFFMHSNIEE+N+VVKPN GHMKSTSLEPS+NEVSIT L
Sbjct: 1  MASVVLMLNSSSFTLSVPSEPAFFMHSNIEEANNVVKPNDGHMKSTSLEPSVNEVSITVL 60

Query: 61 RPR 64
          RPR
Sbjct: 61 RPR 63

[Close]

BLAST of MELO3C007910 vs. NCBI nr
Match: gi|449434488|ref|XP_004135028.1| (PREDICTED: cysteine-rich receptor-like protein kinase 26 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 5.3e-21
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 1


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEPSLNEVSITEL 60
           MASVVLML+S S TLSVPS+PAFFMHSNIEE+N+VVKPN GHMKSTSLEPS+NEVSIT L
Sbjct: 227 MASVVLMLNSSSFTLSVPSEPAFFMHSNIEEANNVVKPNDGHMKSTSLEPSVNEVSITVL 286

Query: 61  RPR 64
           RPR
Sbjct: 287 RPR 289

[Close]

BLAST of MELO3C007910 vs. NCBI nr
Match: gi|18076589|emb|CAC83607.1| (putative receptor-like serine-threonine protein kinase [Solanum tuberosum])

HSP 1 Score: 67.8 bits (164), Expect = 7.9e-09
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 1


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSN-------IEESNSVVKPNGGHMKSTSLEPSLN 60
           MA+VVLMLSSFSL+L +PS PAF+MHSN       I+E N+ V  +   +KS S+  S N
Sbjct: 607 MAAVVLMLSSFSLSLPMPSGPAFYMHSNITAGTSLIQEYNTRVTDSSERVKSKSIGSSRN 666

Query: 61  EVSITELRPR 64
           E SITEL PR
Sbjct: 667 EASITELYPR 676

[Close]

BLAST of MELO3C007910 vs. NCBI nr
Match: gi|18076587|emb|CAC84518.1| (putative receptor-like serine-threonine protein kinase [Solanum tuberosum])

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-08
Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 1


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSN-------IEESNSVVKPNGGHMKSTSLEPSLN 60
           MA+VVLMLSSFSL+L +PS PAF+MHSN       I+E N+ V  +    KS S+  S N
Sbjct: 582 MAAVVLMLSSFSLSLPMPSGPAFYMHSNITAGTSLIQEYNTRVTDSSERAKSKSIGSSRN 641

Query: 61  EVSITELRPR 64
           E SITEL PR
Sbjct: 642 EASITELYPR 651

[Close]

BLAST of MELO3C007910 vs. NCBI nr
Match: gi|823171042|ref|XP_012484670.1| (PREDICTED: putative receptor-like protein kinase At4g00960 isoform X1 [Gossypium raimondii])

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-08
Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 1


Query: 1   MASVVLMLSSFSLTLSVPSDPAFFMHSNIEESNSVVKPNGGHMKSTSLEP-SLNEVSITE 60
           MASV LML+SFS TL+VPS PAF M SN E   S+  P+  +  ST L P S NEV+I+E
Sbjct: 611 MASVALMLNSFSTTLAVPSQPAFLMQSNFESEGSLSFPSTSNKSSTELPPLSRNEVTISE 670

Query: 61  LRPR 64
           L PR
Sbjct: 671 LSPR 674

The following BLAST results are available for this feature:

BLAST of MELO3C007910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMG4_CUCSA	3.7e-21	85.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505980 PE=4 SV=1	[more]
Q8VX50_SOLTU	5.5e-09	55.71	Putative receptor-like serine-threonine protein kinase OS=Solanum tuberosum GN=p...	[more]
A0A0D2RZ61_GOSRA	9.4e-09	57.81	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G084500 PE=3 SV=1	[more]
A0A0D2NNQ4_GOSRA	9.4e-09	57.81	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G084500 PE=3 SV=1	[more]
Q8VX51_SOLTU	9.4e-09	55.71	Putative receptor-like serine-threonine protein kinase OS=Solanum tuberosum GN=p...	[more]

BLAST of MELO3C007910 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38830.1	8.7e-06	50.00	cysteine-rich RLK (RECEPTOR-like protein kinase) 26	[more]

BLAST of MELO3C007910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700193717\|gb\|KGN48921.1\|	5.3e-21	85.71	hypothetical protein Csa_6G505980 [Cucumis sativus]	[more]
gi\|449434488\|ref\|XP_004135028.1\|	5.3e-21	85.71	PREDICTED: cysteine-rich receptor-like protein kinase 26 [Cucumis sativus]	[more]
gi\|18076589\|emb\|CAC83607.1\|	7.9e-09	55.71	putative receptor-like serine-threonine protein kinase [Solanum tuberosum]	[more]
gi\|18076587\|emb\|CAC84518.1\|	1.4e-08	55.71	putative receptor-like serine-threonine protein kinase [Solanum tuberosum]	[more]
gi\|823171042\|ref\|XP_012484670.1\|	1.4e-08	57.81	PREDICTED: putative receptor-like protein kinase At4g00960 isoform X1 [Gossypium...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007910T1	MELO3C007910T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR27002	FAMILY NOT NAMED	coord: 1..63 score: 2.9
None	No IPR available	PANTHER	PTHR27002:SF122	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 28-RELATED	coord: 1..63 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007910	Csa6G505980	Cucumber (Chinese Long) v2	cumeB503
MELO3C007910	Cla014290	Watermelon (97103) v1	mewmB570
MELO3C007910	Cla97C01G019780	Watermelon (97103) v2	mewmbB513
MELO3C007910	CSPI06G31840	Wild cucumber (PI 183967)	cpimeB508
MELO3C007910	Cucsa.043630	Cucumber (Gy14) v1	cgymeB026
MELO3C007910	Lsi01G005960	Bottle gourd (USVL1VR-Ls)	lsimeB156
MELO3C007910	CsGy6G031350	Cucumber (Gy14) v2	cgybmeB444
MELO3C007910	CsaV3_6G047180	Cucumber (Chinese Long) v3	cucmeB517

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007910	Watermelon (97103) v2	mewmbB526
MELO3C007910	Watermelon (97103) v2	mewmbB550
MELO3C007910	Watermelon (97103) v2	mewmbB557
MELO3C007910	Wax gourd	mewgoB634
MELO3C007910	Wax gourd	mewgoB651
MELO3C007910	Cucurbita moschata (Rifu)	cmomeB793
MELO3C007910	Melon (DHL92) v3.5.1	memeB063
MELO3C007910	Melon (DHL92) v3.5.1	memeB134
MELO3C007910	Melon (DHL92) v3.5.1	memeB145
MELO3C007910	Cucurbita maxima (Rimu)	cmameB187
MELO3C007910	Cucurbita maxima (Rimu)	cmameB617
MELO3C007910	Cucurbita maxima (Rimu)	cmameB809
MELO3C007910	Cucurbita moschata (Rifu)	cmomeB174
MELO3C007910	Cucurbita moschata (Rifu)	cmomeB605
MELO3C007910	Cucurbita moschata (Rifu)	cmomeB732
MELO3C007910	Wild cucumber (PI 183967)	cpimeB151
MELO3C007910	Wild cucumber (PI 183967)	cpimeB152
MELO3C007910	Cucumber (Chinese Long) v2	cumeB152
MELO3C007910	Cucumber (Chinese Long) v2	cumeB154
MELO3C007910	Watermelon (Charleston Gray)	mewcgB514
MELO3C007910	Watermelon (Charleston Gray)	mewcgB520
MELO3C007910	Watermelon (Charleston Gray)	mewcgB547
MELO3C007910	Watermelon (97103) v1	mewmB561
MELO3C007910	Watermelon (97103) v1	mewmB569
MELO3C007910	Watermelon (97103) v1	mewmB594
MELO3C007910	Cucurbita pepo (Zucchini)	cpemeB060
MELO3C007910	Cucurbita pepo (Zucchini)	cpemeB280
MELO3C007910	Cucurbita pepo (Zucchini)	cpemeB449
MELO3C007910	Bottle gourd (USVL1VR-Ls)	lsimeB077
MELO3C007910	Bottle gourd (USVL1VR-Ls)	lsimeB331
MELO3C007910	Bottle gourd (USVL1VR-Ls)	lsimeB494
MELO3C007910	Cucumber (Gy14) v2	cgybmeB132
MELO3C007910	Cucumber (Gy14) v2	cgybmeB133
MELO3C007910	Cucumber (Gy14) v2	cgybmeB221
MELO3C007910	Silver-seed gourd	carmeB0147
MELO3C007910	Silver-seed gourd	carmeB0357
MELO3C007910	Silver-seed gourd	carmeB0414
MELO3C007910	Silver-seed gourd	carmeB0643
MELO3C007910	Silver-seed gourd	carmeB0960
MELO3C007910	Cucumber (Chinese Long) v3	cucmeB153
MELO3C007910	Cucumber (Chinese Long) v3	cucmeB154