MELO3C007147.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C007147.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionTransmembrane protein, putative
Locationchr08 : 1116794 .. 1117372 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAATAAACAACCGTATTCAAACCGAGTCGATACCGAGTTGAAGAGAGACAGAAAAACAGAAAGAGAAAAGATTTTAGAGAGAGAACGGATGGATGATGCAATTGACAGCAAGAAAACGAAGACGAAGAAGAGGAGAGTATTCAGCTTCCAGAGGCTTAGAGATTCGTGGAAGTGGAAATTTCTTAGAGATTTCAAGTGGAAGCGATTGAATCTCCAGATCGGTTTCTTTGACGCTATAATTTTCCGAATCGTTTCTCTGTTTGAAGCCATTGCGTTGGTAGGCATCGCCGGTTTCTTCTTCCTCTGTTGTGGCGGTTGCCGCTTTTGATTCCATATTCGCATGTGCTTTTGATATTAACCGACTTCTGTATGTATTTGTTAATTTGTTATAAAAATTTCCTTCCTCTTCAGTATATATATATATATTTTTTCAAGTCATTATCAATTAATTCTCTTTTCGAATTGTGTTGATCTCTGTGGCTTTGATATCTGTGACGAAACGACGTACGAACTTGTTAATTAATCGAGCAAAACTCTTGAGTTTTCGAATTGAATTCATTGGTTATAACATTGCGTT

mRNA sequence

ATAAATAAACAACCGTATTCAAACCGAGTCGATACCGAGTTGAAGAGAGACAGAAAAACAGAAAGAGAAAAGATTTTAGAGAGAGAACGGATGGATGATGCAATTGACAGCAAGAAAACGAAGACGAAGAAGAGGAGAGTATTCAGCTTCCAGAGGCTTAGAGATTCGTGGAAGTGGAAATTTCTTAGAGATTTCAAGTGGAAGCGATTGAATCTCCAGATCGGTTTCTTTGACGCTATAATTTTCCGAATCGTTTCTCTGTTTGAAGCCATTGCGTTGGTAGGCATCGCCGGTTTCTTCTTCCTCTGTTGTGGCGGTTGCCGCTTTTGATTCCATATTCGCATGTGCTTTTGATATTAACCGACTTCTGTATGTATTTGTTAATTTGTTATAAAAATTTCCTTCCTCTTCAGTATATATATATATATTTTTTCAAGTCATTATCAATTAATTCTCTTTTCGAATTGTGTTGATCTCTGTGGCTTTGATATCTGTGACGAAACGACGTACGAACTTGTTAATTAATCGAGCAAAACTCTTGAGTTTTCGAATTGAATTCATTGGTTATAACATTGCGTT

Coding sequence (CDS)

ATGGATGATGCAATTGACAGCAAGAAAACGAAGACGAAGAAGAGGAGAGTATTCAGCTTCCAGAGGCTTAGAGATTCGTGGAAGTGGAAATTTCTTAGAGATTTCAAGTGGAAGCGATTGAATCTCCAGATCGGTTTCTTTGACGCTATAATTTTCCGAATCGTTTCTCTGTTTGAAGCCATTGCGTTGGTAGGCATCGCCGGTTTCTTCTTCCTCTGTTGTGGCGGTTGCCGCTTTTGA

Protein sequence

MDDAIDSKKTKTKKRRVFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGGCRF
Homology
[Close]
BLAST of MELO3C007147.2 vs. NCBI nr
Match: KGN49382.1 (hypothetical protein Csa_6G522750 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 9.4e-32
Identity = 70/79 (88.61%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 1  MDDAIDSKKTKTKKRRVFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEA 60
          MDDAID KKTKT K+RVFSFQRLRDSWKWKFL++FKWKRLNLQ+GFFDAIIFRIVSLFE 
Sbjct: 1  MDDAIDRKKTKTMKKRVFSFQRLRDSWKWKFLKNFKWKRLNLQMGFFDAIIFRIVSLFET 60

Query: 61 IALVGIAGFFFLCCGGCRF 80
          +ALVGIA FFFLCCGGCRF
Sbjct: 61 VALVGIASFFFLCCGGCRF 79

[Close]
BLAST of MELO3C007147.2 vs. NCBI nr
Match: ESR62900.1 (hypothetical protein CICLE_v10017350mg [Citrus clementina])

HSP 1 Score: 72.8 bits (177), Expect = 5.9e-10
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 0 

Query: 11 KTKKRRVFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAG 70
          K   RR   F+RL  R+S +WKFL   KWKRLNLQI FFD ++F+IVS+FEA+ LV  A 
Sbjct: 15 KRLNRRWVLFKRLIKRESLRWKFLG--KWKRLNLQISFFDDVLFKIVSVFEAVVLVATAC 74

Query: 71 FFFLCCGGCRF 80
          FFFLCC GC F
Sbjct: 75 FFFLCC-GCHF 82

[Close]
BLAST of MELO3C007147.2 vs. NCBI nr
Match: KDO78130.1 (hypothetical protein CISIN_1g036027mg [Citrus sinensis])

HSP 1 Score: 72.8 bits (177), Expect = 5.9e-10
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 0 

Query: 11 KTKKRRVFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAG 70
          K   RR   F+RL  R+S +WKFL   KWKRLNLQI FFD ++F+IVS+FEA+ LV  A 
Sbjct: 17 KRLNRRWVLFKRLIKRESLRWKFLG--KWKRLNLQISFFDDVLFKIVSVFEAVVLVATAC 76

Query: 71 FFFLCCGGCRF 80
          FFFLCC GC F
Sbjct: 77 FFFLCC-GCHF 84

[Close]
BLAST of MELO3C007147.2 vs. NCBI nr
Match: OMO49923.1 (hypothetical protein COLO4_38300 [Corchorus olitorius])

HSP 1 Score: 72.4 bits (176), Expect = 7.7e-10
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0 

Query: 7  SKKTKTKKRRVFSFQRLRDSWKWKFLRD-FKWKRLNLQIGFFDAIIFRIVSLFEAIALVG 66
          S  + + KR V   + +++SW+WKFL   FKWKRLN+Q+ FFD ++FRI S+ EAI LV 
Sbjct: 5  SSSSSSSKRWVLFKRLIKESWRWKFLGSAFKWKRLNIQLSFFDDVLFRIASVLEAIYLVA 64

Query: 67 IAGFFFLCCGGCRF 80
             FF+LCC GC F
Sbjct: 65 TLCFFYLCC-GCHF 77

[Close]
BLAST of MELO3C007147.2 vs. NCBI nr
Match: XP_023929751.1 (uncharacterized protein LOC112041078 [Quercus suber])

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-09
Identity = 40/70 (57.14%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 13 KKRRVFSFQRLR--DSWKWKFLRD-FKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGF 72
          KK R   F+RLR   +W+WKFL   FKWKRLNL + F D ++FRI+S+FEAI LV    F
Sbjct: 4  KKNRWIFFRRLRMQTAWRWKFLGSAFKWKRLNLHLSFVDDVLFRILSVFEAIVLVATLCF 63

Query: 73 FFLCCGGCRF 80
          F+LCC GC F
Sbjct: 64 FYLCC-GCHF 72

[Close]
BLAST of MELO3C007147.2 vs. TAIR10
Match: AT5G46295.1 (unknown protein)

HSP 1 Score: 48.5 bits (114), Expect = 2.2e-06
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 0 

Query: 13 KKRRVFSFQRLRDSWKWKFL---RDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGF 72
          +K ++  ++  ++  + KFL      KWKRLNL++ F + + +RI+S+ EA+ LV    F
Sbjct: 3  RKGKLSIWKTTKERTRLKFLGLGGGLKWKRLNLKMTFLETLRYRIMSIIEAMVLVSKLAF 62

Query: 73 FFLCCGGCRF 80
          FFLCC GC+F
Sbjct: 63 FFLCC-GCKF 71

[Close]
BLAST of MELO3C007147.2 vs. TrEMBL
Match: tr|A0A0A0KLX9|A0A0A0KLX9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G522750 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.2e-32
Identity = 70/79 (88.61%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 1  MDDAIDSKKTKTKKRRVFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEA 60
          MDDAID KKTKT K+RVFSFQRLRDSWKWKFL++FKWKRLNLQ+GFFDAIIFRIVSLFE 
Sbjct: 1  MDDAIDRKKTKTMKKRVFSFQRLRDSWKWKFLKNFKWKRLNLQMGFFDAIIFRIVSLFET 60

Query: 61 IALVGIAGFFFLCCGGCRF 80
          +ALVGIA FFFLCCGGCRF
Sbjct: 61 VALVGIASFFFLCCGGCRF 79

[Close]
BLAST of MELO3C007147.2 vs. TrEMBL
Match: tr|V4UFE9|V4UFE9_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017350mg PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.9e-10
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 0 

Query: 11 KTKKRRVFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAG 70
          K   RR   F+RL  R+S +WKFL   KWKRLNLQI FFD ++F+IVS+FEA+ LV  A 
Sbjct: 15 KRLNRRWVLFKRLIKRESLRWKFLG--KWKRLNLQISFFDDVLFKIVSVFEAVVLVATAC 74

Query: 71 FFFLCCGGCRF 80
          FFFLCC GC F
Sbjct: 75 FFFLCC-GCHF 82

[Close]
BLAST of MELO3C007147.2 vs. TrEMBL
Match: tr|A0A067GHI9|A0A067GHI9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g036027mg PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.9e-10
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 0 

Query: 11 KTKKRRVFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAG 70
          K   RR   F+RL  R+S +WKFL   KWKRLNLQI FFD ++F+IVS+FEA+ LV  A 
Sbjct: 17 KRLNRRWVLFKRLIKRESLRWKFLG--KWKRLNLQISFFDDVLFKIVSVFEAVVLVATAC 76

Query: 71 FFFLCCGGCRF 80
          FFFLCC GC F
Sbjct: 77 FFFLCC-GCHF 84

[Close]
BLAST of MELO3C007147.2 vs. TrEMBL
Match: tr|A0A1R3FVP9|A0A1R3FVP9_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_38300 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.1e-10
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0 

Query: 7  SKKTKTKKRRVFSFQRLRDSWKWKFLRD-FKWKRLNLQIGFFDAIIFRIVSLFEAIALVG 66
          S  + + KR V   + +++SW+WKFL   FKWKRLN+Q+ FFD ++FRI S+ EAI LV 
Sbjct: 5  SSSSSSSKRWVLFKRLIKESWRWKFLGSAFKWKRLNIQLSFFDDVLFRIASVLEAIYLVA 64

Query: 67 IAGFFFLCCGGCRF 80
             FF+LCC GC F
Sbjct: 65 TLCFFYLCC-GCHF 77

[Close]
BLAST of MELO3C007147.2 vs. TrEMBL
Match: tr|A0A2I4EKU9|A0A2I4EKU9_9ROSI (uncharacterized protein LOC108990492 OS=Juglans regia OX=51240 GN=LOC108990492 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-09
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 13 KKRRVFSFQRLR-DSWKWKFL--RDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGF 72
          KK R  SF++LR  +W+WKF     F+WKRLNL++ F D ++FRI SLFEAI LV    F
Sbjct: 4  KKNRWISFKKLRGQNWRWKFFFGSAFRWKRLNLKLSFVDDLLFRIASLFEAIVLVARLCF 63

Query: 73 FFLCCGGCRF 80
          F+LCC GC F
Sbjct: 64 FYLCC-GCHF 72

The following BLAST results are available for this feature:
BLAST of MELO3C007147.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49382.19.4e-3288.61hypothetical protein Csa_6G522750 [Cucumis sativus][more]
ESR62900.15.9e-1060.56hypothetical protein CICLE_v10017350mg [Citrus clementina][more]
KDO78130.15.9e-1060.56hypothetical protein CISIN_1g036027mg [Citrus sinensis][more]
OMO49923.17.7e-1051.35hypothetical protein COLO4_38300 [Corchorus olitorius][more]
XP_023929751.11.3e-0957.14uncharacterized protein LOC112041078 [Quercus suber][more]
BLAST of MELO3C007147.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G46295.12.2e-0640.00unknown protein[more]
BLAST of MELO3C007147.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C007147.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KLX9|A0A0A0KLX9_CUCSA6.2e-3288.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G522750 PE=4 SV=1[more]
tr|V4UFE9|V4UFE9_9ROSI3.9e-1060.56Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017350mg PE=4 ... [more]
tr|A0A067GHI9|A0A067GHI9_CITSI3.9e-1060.56Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g036027mg PE=4 SV=1[more]
tr|A0A1R3FVP9|A0A1R3FVP9_9ROSI5.1e-1051.35Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_38300 PE=4 SV=1[more]
tr|A0A2I4EKU9|A0A2I4EKU9_9ROSI2.5e-0955.71uncharacterized protein LOC108990492 OS=Juglans regia OX=51240 GN=LOC108990492 P... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007147.2.1MELO3C007147.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33726FAMILY NOT NAMEDcoord: 11..79
NoneNo IPR availablePANTHERPTHR33726:SF3SUBFAMILY NOT NAMEDcoord: 11..79

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C007147.2Csa6G522750Cucumber (Chinese Long) v2cumedB486
MELO3C007147.2CSPI06G36140Wild cucumber (PI 183967)cpimedB496
MELO3C007147.2CmaCh03G013850Cucurbita maxima (Rimu)cmamedB704
MELO3C007147.2CmoCh03G013780Cucurbita moschata (Rifu)cmomedB695
MELO3C007147.2Cla009760Watermelon (97103) v1medwmB561
MELO3C007147.2ClCG01G024470Watermelon (Charleston Gray)medwcgB510
MELO3C007147.2Cla97C01G024420Watermelon (97103) v2medwmbB507
MELO3C007147.2Bhi03G000058Wax gourdmedwgoB657
MELO3C007147.2Carg15399Silver-seed gourdcarmedB0560
MELO3C007147.2CsaV3_6G051600Cucumber (Chinese Long) v3cucmedB508
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007147.2Cucurbita moschata (Rifu)cmomedB886
MELO3C007147.2Cucurbita pepo (Zucchini)cpemedB052
MELO3C007147.2Cucurbita pepo (Zucchini)cpemedB081
MELO3C007147.2Cucurbita pepo (Zucchini)cpemedB540
MELO3C007147.2Cucurbita pepo (Zucchini)cpemedB572
MELO3C007147.2Wild cucumber (PI 183967)cpimedB074
MELO3C007147.2Cucumber (Chinese Long) v2cumedB075
MELO3C007147.2Melon (DHL92) v3.6.1medmedB074
MELO3C007147.2Bottle gourd (USVL1VR-Ls)lsimedB156
MELO3C007147.2Bottle gourd (USVL1VR-Ls)lsimedB239
MELO3C007147.2Watermelon (Charleston Gray)medwcgB518
MELO3C007147.2Watermelon (97103) v1medwmB549
MELO3C007147.2Silver-seed gourdcarmedB0736
MELO3C007147.2Silver-seed gourdcarmedB0809
MELO3C007147.2Cucumber (Chinese Long) v3cucmedB083
MELO3C007147.2Watermelon (97103) v2medwmbB523
MELO3C007147.2Wax gourdmedwgoB671
MELO3C007147.2Cucumber (Gy14) v2cgybmedB070
MELO3C007147.2Cucumber (Gy14) v2cgybmedB442
MELO3C007147.2Cucurbita maxima (Rimu)cmamedB233
MELO3C007147.2Cucumber (Gy14) v1cgymedB025
MELO3C007147.2Cucurbita maxima (Rimu)cmamedB440
MELO3C007147.2Cucurbita maxima (Rimu)cmamedB897
MELO3C007147.2Cucurbita moschata (Rifu)cmomedB217
MELO3C007147.2Cucurbita moschata (Rifu)cmomedB429