MELO3C007098.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007098.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	LOB domain-containing protein 36
Location	chr08 : 780445 .. 781167 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCCTTTAACTCACAACCCCAAAAGACTTATGGCTCACCATGTGCATCATGTAAATTTCTAAGAAGAAAGTGTGATGCAGACTGCATCTTTGCCCCCCATTTTCCAGCAGATCAACCTAAAAAATTCGAAGTCGTCCATAGGATTTACGGCGCAAGTAACGTCTCTAAAATTCTTAAGGCATTGAGGTATGATGAGCGAGAAGAAACTGTCAACTCTCTAGTCTTTGAGGCAGAGGCTCGGCTGAGAGATCCTGTGCGTGGTTGCGTTGCCTTGATATCAGATCTTCAGGATAGGCTTCAAATGCTTCAAACTGAACTCTCCATCGCTCGACGAGAGCTTTCGTCTTACATGCCATCAGAGCTTCCGCCAAATTATTCGTCTTACATGGCATCAAAGCTTCCGCCAAACTGGTCTTACATGGCATCAAAGCTTCGGCCAAACTCGTCTTACATGGCATCAAAGCTTCGACCAAACTTGTCTTATATGATATCAGAGCTTCTGCCAAAGTGGCCAGGTGAATCTTCCACGAGTCAACGACCAATGATGGAGGGTCAATCATCGAGTCAACGGGTTGATGGCTTTGGCACTACTAATTACTATGGAATAAACAATGATGACGACAGACGACATGTTGTATTTCAACACCCAGTAACGACGACGGAGCAGTTGCTGCCGGCGACAGAGCAGCCACCGTCTCAAGATAGTATTGATTTTTAG

mRNA sequence

ATGAGTTCCTTTAACTCACAACCCCAAAAGACTTATGGCTCACCATGTGCATCATGTAAATTTCTAAGAAGAAAGTGTGATGCAGACTGCATCTTTGCCCCCCATTTTCCAGCAGATCAACCTAAAAAATTCGAAGTCGTCCATAGGATTTACGGCGCAAGTAACGTCTCTAAAATTCTTAAGGCATTGAGGTATGATGAGCGAGAAGAAACTGTCAACTCTCTAGTCTTTGAGGCAGAGGCTCGGCTGAGAGATCCTGTGCGTGGTTGCGTTGCCTTGATATCAGATCTTCAGGATAGGCTTCAAATGCTTCAAACTGAACTCTCCATCGCTCGACGAGAGCTTTCGTCTTACATGCCATCAGAGCTTCCGCCAAATTATTCGTCTTACATGGCATCAAAGCTTCCGCCAAACTGGTCTTACATGGCATCAAAGCTTCGGCCAAACTCGTCTTACATGGCATCAAAGCTTCGACCAAACTTGTCTTATATGATATCAGAGCTTCTGCCAAAGTGGCCAGGTGAATCTTCCACGAGTCAACGACCAATGATGGAGGGTCAATCATCGAGTCAACGGGTTGATGGCTTTGGCACTACTAATTACTATGGAATAAACAATGATGACGACAGACGACATGTTGTATTTCAACACCCAGTAACGACGACGGAGCAGTTGCTGCCGGCGACAGAGCAGCCACCGTCTCAAGATAGTATTGATTTTTAG

Coding sequence (CDS)

ATGAGTTCCTTTAACTCACAACCCCAAAAGACTTATGGCTCACCATGTGCATCATGTAAATTTCTAAGAAGAAAGTGTGATGCAGACTGCATCTTTGCCCCCCATTTTCCAGCAGATCAACCTAAAAAATTCGAAGTCGTCCATAGGATTTACGGCGCAAGTAACGTCTCTAAAATTCTTAAGGCATTGAGGTATGATGAGCGAGAAGAAACTGTCAACTCTCTAGTCTTTGAGGCAGAGGCTCGGCTGAGAGATCCTGTGCGTGGTTGCGTTGCCTTGATATCAGATCTTCAGGATAGGCTTCAAATGCTTCAAACTGAACTCTCCATCGCTCGACGAGAGCTTTCGTCTTACATGCCATCAGAGCTTCCGCCAAATTATTCGTCTTACATGGCATCAAAGCTTCCGCCAAACTGGTCTTACATGGCATCAAAGCTTCGGCCAAACTCGTCTTACATGGCATCAAAGCTTCGACCAAACTTGTCTTATATGATATCAGAGCTTCTGCCAAAGTGGCCAGGTGAATCTTCCACGAGTCAACGACCAATGATGGAGGGTCAATCATCGAGTCAACGGGTTGATGGCTTTGGCACTACTAATTACTATGGAATAAACAATGATGACGACAGACGACATGTTGTATTTCAACACCCAGTAACGACGACGGAGCAGTTGCTGCCGGCGACAGAGCAGCCACCGTCTCAAGATAGTATTGATTTTTAG

Protein sequence

MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSELPPNYSSYMASKLPPNWSYMASKLRPNSSYMASKLRPNLSYMISELLPKWPGESSTSQRPMMEGQSSSQRVDGFGTTNYYGINNDDDRRHVVFQHPVTTTEQLLPATEQPPSQDSIDF

Homology

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BLAST of MELO3C007098.2 vs. NCBI nr
Match: XP_008439580.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 2.1e-98
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60
           MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL
Sbjct: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60

Query: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120
           KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP
Sbjct: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120

Query: 121 SELPPNXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPGESSTSQ 180
           SELPPNXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPGESSTSQ
Sbjct: 121 SELPPNXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPGESSTSQ 180

Query: 181 RPMMEGQSSSQRVDGFGTTNYYGINNXXXXXXVVFQHPVTTTEQLLPATEQPPSQDSIDF 240
           RPMMEGQSSSQRVDGFGTTNYYGINNXXXXXXVVFQHPVTTTEQLLPATEQPPSQDSIDF
Sbjct: 181 RPMMEGQSSSQRVDGFGTTNYYGINNXXXXXXVVFQHPVTTTEQLLPATEQPPSQDSIDF 240

[Close]

BLAST of MELO3C007098.2 vs. NCBI nr
Match: XP_004134907.2 (PREDICTED: LOB domain-containing protein 4-like [Cucumis sativus] >KGN49438.1 hypothetical protein Csa_6G525240 [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 1.3e-71
Identity = 174/240 (72.50%), Postives = 188/240 (78.33%), Query Frame = 0


Query: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60
           MSS NSQ QK YGSPCASCKFLRRKCD DCIFAP+FPADQP+KFEVVHRIYGASNVSKIL
Sbjct: 1   MSSSNSQSQKIYGSPCASCKFLRRKCDVDCIFAPYFPADQPQKFEVVHRIYGASNVSKIL 60

Query: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120
           KA RYDEREETV SLVFEAEARL DPV GCVA I+ LQ RLQ LQTEL+I +++L SYM 
Sbjct: 61  KASRYDEREETVKSLVFEAEARLEDPVHGCVAFIAGLQQRLQRLQTELAIVQQQLLSYMA 120

Query: 121 SELPPNXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPGESSTSQ 180
           S+LPP                       XXXXXXXXXXXXXXXXXXXXXXXWP ESS SQ
Sbjct: 121 SQLPP-----------------------XXXXXXXXXXXXXXXXXXXXXXXWPRESSLSQ 180

Query: 181 RPMMEGQSSSQRVDGFGTTNYYGINNXXXXXXVVFQHPVTTTEQLLPATEQPPSQDSIDF 240
           +PMME QSS +RVDG+GTTNYYGIN       VV QHP+ TTEQ+LPATEQPPS+DS DF
Sbjct: 181 QPMMEDQSSCRRVDGYGTTNYYGINTDDDKRHVVRQHPI-TTEQVLPATEQPPSKDSTDF 216

[Close]

BLAST of MELO3C007098.2 vs. NCBI nr
Match: XP_022146502.1 (LOB domain-containing protein 36-like [Momordica charantia])

HSP 1 Score: 148.7 bits (374), Expect = 2.6e-32
Identity = 71/120 (59.17%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 3   SFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKA 62
           S +  P   YGSPCA+C +LRRKC +DC+FAPHFPAD  +KFE+  R YGASN+ KI   
Sbjct: 2   SSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSR 61

Query: 63  LRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSE 122
           LR+DER+E   SLV+EAEAR  DPV GCV  IS L DRL+ +Q++L  A+RELS Y+ SE
Sbjct: 62  LRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAKRELSIYLGSE 121

[Close]

BLAST of MELO3C007098.2 vs. NCBI nr
Match: XP_021629989.1 (LOB domain-containing protein 36-like [Manihot esculenta] >XP_021629990.1 LOB domain-containing protein 36-like [Manihot esculenta] >OAY35348.1 hypothetical protein MANES_12G093800 [Manihot esculenta])

HSP 1 Score: 147.5 bits (371), Expect = 5.8e-32
Identity = 70/113 (61.95%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+K+L  L   +RE+ VN
Sbjct: 6   SPCAACKFLRRKCIQECVFAPYFPPDQPQKFSCVHKVFGASNVAKLLNELNASQREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYM-PSELPP 126
           SL +EAE RLRDPV GCV LIS LQ RL+ LQ +L IA+REL+ Y+ PS + P
Sbjct: 66  SLAYEAEERLRDPVYGCVGLISILQHRLKQLQNDLYIAKRELAGYIGPSAMLP 118

[Close]

BLAST of MELO3C007098.2 vs. NCBI nr
Match: XP_023743273.1 (LOB domain-containing protein 36-like [Lactuca sativa] >XP_023743274.1 LOB domain-containing protein 36-like [Lactuca sativa] >PLY66529.1 hypothetical protein LSAT_4X168721 [Lactuca sativa])

HSP 1 Score: 147.5 bits (371), Expect = 5.8e-32
Identity = 69/111 (62.16%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP KF  VH+++GASNV+KIL  L   +RE+ VN
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPVKFANVHKVFGASNVAKILNELNATQREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSELP 125
           SL +EAEARLRDPV GCV LIS LQ RL+ +QT+L IA++EL +Y+  + P
Sbjct: 66  SLAYEAEARLRDPVYGCVGLISILQTRLKQVQTDLLIAKQELCTYIGGQSP 116

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BLAST of MELO3C007098.2 vs. TAIR10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1)

HSP 1 Score: 141.4 bits (355), Expect = 7.5e-34
Identity = 64/106 (60.38%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+K+L  L  ++RE+ VN
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYM 120
           SL +EAEARLRDPV GCV LIS LQ RL+ +  +L  A++EL++Y+
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYV 111

[Close]

BLAST of MELO3C007098.2 vs. TAIR10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-33
Identity = 64/105 (60.95%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+K+L  L   +RE+ VN
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSY 119
           SL +EA+ RLRDPV GCV +IS LQ +L+ LQ +LS A+ ELS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of MELO3C007098.2 vs. TAIR10
Match: AT2G23660.1 (LOB domain-containing protein 10)

HSP 1 Score: 135.6 bits (340), Expect = 4.1e-32
Identity = 66/119 (55.46%), Postives = 85/119 (71.43%), Query Frame = 0


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           +PCA+CK LRRKC  +C+FAP+FP   P+KF  VHR++GASNV+KIL  L  D+RE+TVN
Sbjct: 4   TPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDTVN 63

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYM-------PSELPP 126
           SL +EAEAR+RDP+ GCV LIS LQ  L+ +Q +L  A+ EL  Y+       P  LPP
Sbjct: 64  SLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELVGYLGPDAVIPPPYLPP 122

[Close]

BLAST of MELO3C007098.2 vs. TAIR10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-31
Identity = 61/102 (59.80%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCASCK LRR+C  DCIFAP+FP D P KF +VH+++GASNVSK+L+ L   +R + VN
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARREL 116
           SLVFEA AR+RDPV GCV  IS LQ+++  LQ +L++A+ E+
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEI 108

[Close]

BLAST of MELO3C007098.2 vs. TAIR10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 132.5 bits (332), Expect = 3.5e-31
Identity = 63/108 (58.33%), Postives = 80/108 (74.07%), Query Frame = 0


Query: 11  TYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREE 70
           +Y SPCA+CKFLRRKC   CIFAP+FP ++P KF  VH+I+GASNV+K+L  L   +RE+
Sbjct: 7   SYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQRED 66

Query: 71  TVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSY 119
            VNSL +EAEAR+RDPV GCV  IS LQ ++  LQ EL  A  +L+ Y
Sbjct: 67  AVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of MELO3C007098.2 vs. Swiss-Prot
Match: sp|Q9FKZ3|LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-32
Identity = 64/106 (60.38%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+K+L  L  ++RE+ VN
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYM 120
           SL +EAEARLRDPV GCV LIS LQ RL+ +  +L  A++EL++Y+
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYV 111

[Close]

BLAST of MELO3C007098.2 vs. Swiss-Prot
Match: sp|A2WXT0|LBD6_ORYSI (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-32
Identity = 66/106 (62.26%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 13  GSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETV 72
           GSPCA+CKFLRRKC  DC+FAP+FP D P+KF  VHR++GASNV+K+L  L   +RE+ V
Sbjct: 36  GSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAV 95

Query: 73  NSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSY 119
           NSL +EA+ RLRDPV GCVA+IS LQ  L+ LQ +L+ A+ ELS Y
Sbjct: 96  NSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

[Close]

BLAST of MELO3C007098.2 vs. Swiss-Prot
Match: sp|Q8LQH4|LBD6_ORYSJ (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-32
Identity = 66/106 (62.26%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 13  GSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETV 72
           GSPCA+CKFLRRKC  DC+FAP+FP D P+KF  VHR++GASNV+K+L  L   +RE+ V
Sbjct: 36  GSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAV 95

Query: 73  NSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSY 119
           NSL +EA+ RLRDPV GCVA+IS LQ  L+ LQ +L+ A+ ELS Y
Sbjct: 96  NSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

[Close]

BLAST of MELO3C007098.2 vs. Swiss-Prot
Match: sp|O04479|AS2_ARATH (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.9e-32
Identity = 64/105 (60.95%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+K+L  L   +RE+ VN
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSY 119
           SL +EA+ RLRDPV GCV +IS LQ +L+ LQ +LS A+ ELS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of MELO3C007098.2 vs. Swiss-Prot
Match: sp|Q32SG3|LBD6_MAIZE (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.1e-32
Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 13  GSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETV 72
           GSPCA+CKFLRRKC  DC+FAP+FP D P+KF  VHR++GASNV+K+L  L   +RE+ V
Sbjct: 31  GSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAV 90

Query: 73  NSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSY 119
           NSL +EA+ RLRDPV GCV +IS LQ  L+ LQ +L+ A+ ELS Y
Sbjct: 91  NSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKY 136

[Close]

BLAST of MELO3C007098.2 vs. TrEMBL
Match: tr|A0A1S3AYN9|A0A1S3AYN9_CUCME (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103484334 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.4e-98
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60
           MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL
Sbjct: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60

Query: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120
           KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP
Sbjct: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120

Query: 121 SELPPNXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPGESSTSQ 180
           SELPPNXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPGESSTSQ
Sbjct: 121 SELPPNXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPGESSTSQ 180

Query: 181 RPMMEGQSSSQRVDGFGTTNYYGINNXXXXXXVVFQHPVTTTEQLLPATEQPPSQDSIDF 240
           RPMMEGQSSSQRVDGFGTTNYYGINNXXXXXXVVFQHPVTTTEQLLPATEQPPSQDSIDF
Sbjct: 181 RPMMEGQSSSQRVDGFGTTNYYGINNXXXXXXVVFQHPVTTTEQLLPATEQPPSQDSIDF 240

[Close]

BLAST of MELO3C007098.2 vs. TrEMBL
Match: tr|A0A0A0KIS2|A0A0A0KIS2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525240 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 8.4e-72
Identity = 174/240 (72.50%), Postives = 188/240 (78.33%), Query Frame = 0


Query: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60
           MSS NSQ QK YGSPCASCKFLRRKCD DCIFAP+FPADQP+KFEVVHRIYGASNVSKIL
Sbjct: 1   MSSSNSQSQKIYGSPCASCKFLRRKCDVDCIFAPYFPADQPQKFEVVHRIYGASNVSKIL 60

Query: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120
           KA RYDEREETV SLVFEAEARL DPV GCVA I+ LQ RLQ LQTEL+I +++L SYM 
Sbjct: 61  KASRYDEREETVKSLVFEAEARLEDPVHGCVAFIAGLQQRLQRLQTELAIVQQQLLSYMA 120

Query: 121 SELPPNXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPGESSTSQ 180
           S+LPP                       XXXXXXXXXXXXXXXXXXXXXXXWP ESS SQ
Sbjct: 121 SQLPP-----------------------XXXXXXXXXXXXXXXXXXXXXXXWPRESSLSQ 180

Query: 181 RPMMEGQSSSQRVDGFGTTNYYGINNXXXXXXVVFQHPVTTTEQLLPATEQPPSQDSIDF 240
           +PMME QSS +RVDG+GTTNYYGIN       VV QHP+ TTEQ+LPATEQPPS+DS DF
Sbjct: 181 QPMMEDQSSCRRVDGYGTTNYYGINTDDDKRHVVRQHPI-TTEQVLPATEQPPSKDSTDF 216

[Close]

BLAST of MELO3C007098.2 vs. TrEMBL
Match: tr|A0A2J6JUN3|A0A2J6JUN3_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_4X168721 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.8e-32
Identity = 69/111 (62.16%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP KF  VH+++GASNV+KIL  L   +RE+ VN
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPVKFANVHKVFGASNVAKILNELNATQREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSELP 125
           SL +EAEARLRDPV GCV LIS LQ RL+ +QT+L IA++EL +Y+  + P
Sbjct: 66  SLAYEAEARLRDPVYGCVGLISILQTRLKQVQTDLLIAKQELCTYIGGQSP 116

[Close]

BLAST of MELO3C007098.2 vs. TrEMBL
Match: tr|A0A2U1MAT5|A0A2U1MAT5_ARTAN (Protein IAL1 OS=Artemisia annua OX=35608 GN=CTI12_AA400610 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.8e-32
Identity = 70/113 (61.95%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH++YGASNV+K+L  L   +RE+ VN
Sbjct: 15  SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAKVHKVYGASNVAKLLSDLGATQREDAVN 74

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYM-PSELPP 126
           SL +EA+ARLRDPV GCV LIS LQ RL+ +Q +L  A+REL+SY+ PS + P
Sbjct: 75  SLAYEADARLRDPVYGCVGLISILQHRLKQVQNDLETAKRELASYIGPSAMLP 127

[Close]

BLAST of MELO3C007098.2 vs. TrEMBL
Match: tr|A0A2C9UW34|A0A2C9UW34_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G093800 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.8e-32
Identity = 70/113 (61.95%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+K+L  L   +RE+ VN
Sbjct: 6   SPCAACKFLRRKCIQECVFAPYFPPDQPQKFSCVHKVFGASNVAKLLNELNASQREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYM-PSELPP 126
           SL +EAE RLRDPV GCV LIS LQ RL+ LQ +L IA+REL+ Y+ PS + P
Sbjct: 66  SLAYEAEERLRDPVYGCVGLISILQHRLKQLQNDLYIAKRELAGYIGPSAMLP 118

The following BLAST results are available for this feature:

BLAST of MELO3C007098.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439580.1	2.1e-98	100.00	PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]	[more]
XP_004134907.2	1.3e-71	72.50	PREDICTED: LOB domain-containing protein 4-like [Cucumis sativus] >KGN49438.1 hy...	[more]
XP_022146502.1	2.6e-32	59.17	LOB domain-containing protein 36-like [Momordica charantia]	[more]
XP_021629989.1	5.8e-32	61.95	LOB domain-containing protein 36-like [Manihot esculenta] >XP_021629990.1 LOB do...	[more]
XP_023743273.1	5.8e-32	62.16	LOB domain-containing protein 36-like [Lactuca sativa] >XP_023743274.1 LOB domai...	[more]

BLAST of MELO3C007098.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66870.1	7.5e-34	60.38	ASYMMETRIC LEAVES 2-like 1	[more]
AT1G65620.1	2.2e-33	60.95	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G23660.1	4.1e-32	55.46	LOB domain-containing protein 10	[more]
AT2G30130.1	2.0e-31	59.80	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.2	3.5e-31	58.33	Lateral organ boundaries (LOB) domain family protein	[more]

BLAST of MELO3C007098.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FKZ3\|LBD36_ARATH	1.3e-32	60.38	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]
sp\|A2WXT0\|LBD6_ORYSI	2.3e-32	62.26	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
sp\|Q8LQH4\|LBD6_ORYSJ	2.3e-32	62.26	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]
sp\|O04479\|AS2_ARATH	3.9e-32	60.95	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
sp\|Q32SG3\|LBD6_MAIZE	5.1e-32	61.32	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]

BLAST of MELO3C007098.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYN9\|A0A1S3AYN9_CUCME	1.4e-98	100.00	LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103484334 PE...	[more]
tr\|A0A0A0KIS2\|A0A0A0KIS2_CUCSA	8.4e-72	72.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525240 PE=4 SV=1	[more]
tr\|A0A2J6JUN3\|A0A2J6JUN3_LACSA	3.8e-32	62.16	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_4X168721 PE=4 SV=1	[more]
tr\|A0A2U1MAT5\|A0A2U1MAT5_ARTAN	3.8e-32	61.95	Protein IAL1 OS=Artemisia annua OX=35608 GN=CTI12_AA400610 PE=4 SV=1	[more]
tr\|A0A2C9UW34\|A0A2C9UW34_MANES	3.8e-32	61.95	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G093800 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007098.2.1	MELO3C007098.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..240
None	No IPR available	PANTHER	PTHR31301	FAMILY NOT NAMED	coord: 12..144
None	No IPR available	PANTHER	PTHR31301:SF63	SUBFAMILY NOT NAMED	coord: 12..144
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 15..112 e-value: 5.5E-38 score: 129.4
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..115 score: 25.718

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007098.2	Csa6G525240	Cucumber (Chinese Long) v2	cumedB486
MELO3C007098.2	CSPI06G36660	Wild cucumber (PI 183967)	cpimedB496
MELO3C007098.2	Cucsa.048040	Cucumber (Gy14) v1	cgymedB025
MELO3C007098.2	Lsi01G001110	Bottle gourd (USVL1VR-Ls)	lsimedB156
MELO3C007098.2	CsGy6G035990	Cucumber (Gy14) v2	cgybmedB442
MELO3C007098.2	Cla009805	Watermelon (97103) v1	medwmB561
MELO3C007098.2	Cla97C01G024940	Watermelon (97103) v2	medwmbB507
MELO3C007098.2	Bhi03G000115	Wax gourd	medwgoB657
MELO3C007098.2	CsaV3_6G052130	Cucumber (Chinese Long) v3	cucmedB508

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007098.2	Cucurbita maxima (Rimu)	cmamedB233
MELO3C007098.2	Cucurbita maxima (Rimu)	cmamedB704
MELO3C007098.2	Cucurbita maxima (Rimu)	cmamedB897
MELO3C007098.2	Cucurbita moschata (Rifu)	cmomedB217
MELO3C007098.2	Cucurbita moschata (Rifu)	cmomedB695
MELO3C007098.2	Cucurbita moschata (Rifu)	cmomedB886
MELO3C007098.2	Cucurbita pepo (Zucchini)	cpemedB081
MELO3C007098.2	Cucurbita pepo (Zucchini)	cpemedB540
MELO3C007098.2	Cucurbita pepo (Zucchini)	cpemedB572
MELO3C007098.2	Bottle gourd (USVL1VR-Ls)	lsimedB239
MELO3C007098.2	Watermelon (Charleston Gray)	medwcgB510
MELO3C007098.2	Watermelon (Charleston Gray)	medwcgB518
MELO3C007098.2	Watermelon (97103) v1	medwmB549
MELO3C007098.2	Silver-seed gourd	carmedB0312
MELO3C007098.2	Silver-seed gourd	carmedB0736