MELO3C007098 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007098
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	LOB domain family protein
Location	chr8 : 781898 .. 782620 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCCTTTAACTCACAACCCCAAAAGACTTATGGCTCACCATGTGCATCATGTAAATTTCTAAGAAGAAAGTGTGATGCAGACTGCATCTTTGCCCCCCATTTTCCAGCAGATCAACCTAAAAAATTCGAAGTCGTCCATAGGATTTACGGCGCAAGTAACGTCTCTAAAATTCTTAAGGCATTGAGGTATGATGAGCGAGAAGAAACTGTCAACTCTCTAGTCTTTGAGGCAGAGGCTCGGCTGAGAGATCCTGTGCGTGGTTGCGTTGCCTTGATATCAGATCTTCAGGATAGGCTTCAAATGCTTCAAACTGAACTCTCCATCGCTCGACGAGAGCTTTCGTCTTACATGCCATCAGAGCTTCCGCCAAATTATTCGTCTTACATGGCATCAAAGCTTCCGCCAAACTGGTCTTACATGGCATCAAAGCTTCGGCCAAACTCGTCTTACATGGCATCAAAGCTTCGACCAAACTTGTCTTATATGATATCAGAGCTTCTGCCAAAGTGGCCAGGTGAATCTTCCACGAGTCAACGACCAATGATGGAGGGTCAATCATCGAGTCAACGGGTTGATGGCTTTGGCACTACTAATTACTATGGAATAAACAATGATGACGACAGACGACATGTTGTATTTCAACACCCAGTAACGACGACGGAGCAGTTGCTGCCGGCGACAGAGCAGCCACCGTCTCAAGATAGTATTGATTTTTAG

mRNA sequence

ATGAGTTCCTTTAACTCACAACCCCAAAAGACTTATGGCTCACCATGTGCATCATGTAAATTTCTAAGAAGAAAGTGTGATGCAGACTGCATCTTTGCCCCCCATTTTCCAGCAGATCAACCTAAAAAATTCGAAGTCGTCCATAGGATTTACGGCGCAAGTAACGTCTCTAAAATTCTTAAGGCATTGAGGTATGATGAGCGAGAAGAAACTGTCAACTCTCTAGTCTTTGAGGCAGAGGCTCGGCTGAGAGATCCTGTGCGTGGTTGCGTTGCCTTGATATCAGATCTTCAGGATAGGCTTCAAATGCTTCAAACTGAACTCTCCATCGCTCGACGAGAGCTTTCGTCTTACATGCCATCAGAGCTTCCGCCAAATTATTCGTCTTACATGGCATCAAAGCTTCCGCCAAACTGGTCTTACATGGCATCAAAGCTTCGGCCAAACTCGTCTTACATGGCATCAAAGCTTCGACCAAACTTGTCTTATATGATATCAGAGCTTCTGCCAAAGTGGCCAGGTGAATCTTCCACGAGTCAACGACCAATGATGGAGGGTCAATCATCGAGTCAACGGGTTGATGGCTTTGGCACTACTAATTACTATGGAATAAACAATGATGACGACAGACGACATGTTGTATTTCAACACCCAGTAACGACGACGGAGCAGTTGCTGCCGGCGACAGAGCAGCCACCGTCTCAAGATAGTATTGATTTTTAG

Coding sequence (CDS)

ATGAGTTCCTTTAACTCACAACCCCAAAAGACTTATGGCTCACCATGTGCATCATGTAAATTTCTAAGAAGAAAGTGTGATGCAGACTGCATCTTTGCCCCCCATTTTCCAGCAGATCAACCTAAAAAATTCGAAGTCGTCCATAGGATTTACGGCGCAAGTAACGTCTCTAAAATTCTTAAGGCATTGAGGTATGATGAGCGAGAAGAAACTGTCAACTCTCTAGTCTTTGAGGCAGAGGCTCGGCTGAGAGATCCTGTGCGTGGTTGCGTTGCCTTGATATCAGATCTTCAGGATAGGCTTCAAATGCTTCAAACTGAACTCTCCATCGCTCGACGAGAGCTTTCGTCTTACATGCCATCAGAGCTTCCGCCAAATTATTCGTCTTACATGGCATCAAAGCTTCCGCCAAACTGGTCTTACATGGCATCAAAGCTTCGGCCAAACTCGTCTTACATGGCATCAAAGCTTCGACCAAACTTGTCTTATATGATATCAGAGCTTCTGCCAAAGTGGCCAGGTGAATCTTCCACGAGTCAACGACCAATGATGGAGGGTCAATCATCGAGTCAACGGGTTGATGGCTTTGGCACTACTAATTACTATGGAATAAACAATGATGACGACAGACGACATGTTGTATTTCAACACCCAGTAACGACGACGGAGCAGTTGCTGCCGGCGACAGAGCAGCCACCGTCTCAAGATAGTATTGATTTTTAG

Protein sequence

MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSELPPNYSSYMASKLPPNWSYMASKLRPNSSYMASKLRPNLSYMISELLPKWPGESSTSQRPMMEGQSSSQRVDGFGTTNYYGINNDDDRRHVVFQHPVTTTEQLLPATEQPPSQDSIDF*

Homology

[Close]

BLAST of MELO3C007098 vs. Swiss-Prot
Match: LBD10_ARATH (LOB domain-containing protein 10 OS=Arabidopsis thaliana GN=LBD10 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34
Identity = 82/199 (41.21%), Postives = 111/199 (55.78%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           +PCA+CK LRRKC  +C+FAP+FP   P+KF  VHR++GASNV+KIL  L  D+RE+TVN
Sbjct: 4   TPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDTVN 63

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSE--LPPNYSSYM 133
           SL +EAEAR+RDP+ GCV LIS LQ  L+ +Q +L  A+ EL  Y+  +  +PP Y   +
Sbjct: 64  SLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELVGYLGPDAVIPPPYLPPI 123

Query: 134 ASKLPPNWSYMASKLRPNSSYMASKL---RPNLSYMISELLPKWPGESSTSQRPMMEGQS 193
            +  PPN+      + P        L    PN+S       P+       +         
Sbjct: 124 GNNPPPNFMMSMEGMPPGVIPQGEPLMIREPNMSQQHHHQQPQDEQLQFIASDAQRMAAM 183

Query: 194 SSQRVDGFGTTNYYGINND 208
             +R D  G  N YGI+N+
Sbjct: 184 MLERGDQQGMFNGYGIDNN 202

[Close]

BLAST of MELO3C007098 vs. Swiss-Prot
Match: LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33
Identity = 74/139 (53.24%), Postives = 97/139 (69.78%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+K+L  L  ++RE+ VN
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYM-PSELPPNYSSYMA 133
           SL +EAEARLRDPV GCV LIS LQ RL+ +  +L  A++EL++Y+ P  + P    +  
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPILQPHFM 125

Query: 134 SKLPPNWSYMASKLRPNSS 152
           S LPP         RP+SS
Sbjct: 126 S-LPP------QPQRPSSS 137

[Close]

BLAST of MELO3C007098 vs. Swiss-Prot
Match: LBD6_ORYSI (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica GN=LBD6 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-32
Identity = 66/106 (62.26%), Postives = 81/106 (76.42%), Query Frame = 1


Query: 13  GSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETV 72
           GSPCA+CKFLRRKC  DC+FAP+FP D P+KF  VHR++GASNV+K+L  L   +RE+ V
Sbjct: 36  GSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAV 95

Query: 73  NSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSY 119
           NSL +EA+ RLRDPV GCVA+IS LQ  L+ LQ +L+ A+ ELS Y
Sbjct: 96  NSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

[Close]

BLAST of MELO3C007098 vs. Swiss-Prot
Match: LBD6_ORYSJ (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=LBD6 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-32
Identity = 66/106 (62.26%), Postives = 81/106 (76.42%), Query Frame = 1


Query: 13  GSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETV 72
           GSPCA+CKFLRRKC  DC+FAP+FP D P+KF  VHR++GASNV+K+L  L   +RE+ V
Sbjct: 36  GSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAV 95

Query: 73  NSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSY 119
           NSL +EA+ RLRDPV GCVA+IS LQ  L+ LQ +L+ A+ ELS Y
Sbjct: 96  NSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

[Close]

BLAST of MELO3C007098 vs. Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-32
Identity = 64/105 (60.95%), Postives = 81/105 (77.14%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+K+L  L   +RE+ VN
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSY 119
           SL +EA+ RLRDPV GCV +IS LQ +L+ LQ +LS A+ ELS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of MELO3C007098 vs. TrEMBL
Match: A0A0A0KIS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525240 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.6e-91
Identity = 175/240 (72.92%), Postives = 192/240 (80.00%), Query Frame = 1


Query: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60
           MSS NSQ QK YGSPCASCKFLRRKCD DCIFAP+FPADQP+KFEVVHRIYGASNVSKIL
Sbjct: 1   MSSSNSQSQKIYGSPCASCKFLRRKCDVDCIFAPYFPADQPQKFEVVHRIYGASNVSKIL 60

Query: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120
           KA RYDEREETV SLVFEAEARL DPV GCVA I+ LQ RLQ LQTEL+I +++L SYM 
Sbjct: 61  KASRYDEREETVKSLVFEAEARLEDPVHGCVAFIAGLQQRLQRLQTELAIVQQQLLSYMA 120

Query: 121 SELPPNYSSYMASKLPPNWSYMASKLRPNSSYMASKLRPNLSYMISELLPKWPGESSTSQ 180
           S+LP                       PNSSYMAS+L PN SYM+SELLPKWP ESS SQ
Sbjct: 121 SQLP-----------------------PNSSYMASELPPNSSYMLSELLPKWPRESSLSQ 180

Query: 181 RPMMEGQSSSQRVDGFGTTNYYGINNDDDRRHVVFQHPVTTTEQLLPATEQPPSQDSIDF 240
           +PMME QSS +RVDG+GTTNYYGIN DDD+RHVV QHP+ TTEQ+LPATEQPPS+DS DF
Sbjct: 181 QPMMEDQSSCRRVDGYGTTNYYGINTDDDKRHVVRQHPI-TTEQVLPATEQPPSKDSTDF 216

[Close]

BLAST of MELO3C007098 vs. TrEMBL
Match: M5W6J8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026393mg PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.9e-34
Identity = 87/183 (47.54%), Postives = 119/183 (65.03%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+KIL  L   +RE+ VN
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKILNELNATQREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSELPPNYSSYMAS 133
           SL +EAEARLRDPV GCV LIS LQ RL+ +Q +L  A++EL++YM  +        M S
Sbjct: 66  SLAYEAEARLRDPVYGCVGLISILQQRLKQVQADLYNAKKELATYMGPQA-------MLS 125

Query: 134 KLPPNWSYMASKLRPNSSYMASKLRPNLSYMISELLPKWPGESSTSQRPMMEGQSSSQRV 193
            L P  +YM  +L+ N+S  +S + P   Y +S ++    G +S  Q  + E Q   Q+ 
Sbjct: 126 ILQPPPTYMPQQLQGNAS--SSAVSP---YTMSPMMGIPTGPTS-GQLMIREPQQQQQQQ 175

Query: 194 DGF 197
             F
Sbjct: 186 QMF 175

[Close]

BLAST of MELO3C007098 vs. TrEMBL
Match: V4K019_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10004535mg PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.1e-33
Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+K+L  L  + RE+ VN
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAYVHKVFGASNVAKLLNELAANHREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYM-PSELPPNYSSYMA 133
           SL +EAEARLRDPV GCV LIS LQ RL+ LQ ++  A++EL++Y+ P  + P    + A
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQLQHDIENAKKELAAYVGPQAMLPILQPHQA 125

Query: 134 SKLPPNWSYMASKLRPNSSYMASKL 158
              P   S      RP+SS  AS L
Sbjct: 126 Q--PHFMSLPPQPQRPSSSSSASVL 148

[Close]

BLAST of MELO3C007098 vs. TrEMBL
Match: A0A118K1C5_CYNCS (Lateral organ boundaries domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_019059 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.7e-32
Identity = 85/204 (41.67%), Postives = 118/204 (57.84%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+KIL  L   +RE+ VN
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKILNELNTTQREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYM----------PSEL 133
           SL +EAEARLRDPV GCV LIS LQ RL+ +Q++L  A+ EL++Y+          P  +
Sbjct: 66  SLAYEAEARLRDPVYGCVGLISILQHRLKQVQSDLHNAKLELANYIGPSAMLPILNPGFI 125

Query: 134 P--PNYSSYMASKLPPNWSYMASKLRP----NSSYMASKLRPNLSYMIS--------ELL 193
           P  PN  S     LP N   M     P    +S +    L      +++        ++L
Sbjct: 126 PQIPNMPSSSVPVLPYNMQPMMGMPGPGNFRDSQHHPQILEAQQQQLVAVANPREQQDML 185

[Close]

BLAST of MELO3C007098 vs. TrEMBL
Match: A0A0J8BSE4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194110 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.7e-32
Identity = 69/113 (61.06%), Postives = 91/113 (80.53%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP++F  VH+++GASNV+K+L  L   +RE+ VN
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQRFANVHKVFGASNVAKLLNELNAAQREDVVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYM-PSELPP 126
           SL +EAEARLRDPV GCV LIS LQ RL+ +QT+L  A++EL++Y+ PS L P
Sbjct: 66  SLAYEAEARLRDPVYGCVGLISLLQQRLKQVQTDLYTAKKELATYVGPSALMP 118

[Close]

BLAST of MELO3C007098 vs. TAIR10
Match: AT2G23660.1 (AT2G23660.1 LOB domain-containing protein 10)

HSP 1 Score: 148.3 bits (373), Expect = 6.1e-36
Identity = 82/199 (41.21%), Postives = 111/199 (55.78%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           +PCA+CK LRRKC  +C+FAP+FP   P+KF  VHR++GASNV+KIL  L  D+RE+TVN
Sbjct: 4   TPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDTVN 63

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSE--LPPNYSSYM 133
           SL +EAEAR+RDP+ GCV LIS LQ  L+ +Q +L  A+ EL  Y+  +  +PP Y   +
Sbjct: 64  SLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELVGYLGPDAVIPPPYLPPI 123

Query: 134 ASKLPPNWSYMASKLRPNSSYMASKL---RPNLSYMISELLPKWPGESSTSQRPMMEGQS 193
            +  PPN+      + P        L    PN+S       P+       +         
Sbjct: 124 GNNPPPNFMMSMEGMPPGVIPQGEPLMIREPNMSQQHHHQQPQDEQLQFIASDAQRMAAM 183

Query: 194 SSQRVDGFGTTNYYGINND 208
             +R D  G  N YGI+N+
Sbjct: 184 MLERGDQQGMFNGYGIDNN 202

[Close]

BLAST of MELO3C007098 vs. TAIR10
Match: AT5G66870.1 (AT5G66870.1 ASYMMETRIC LEAVES 2-like 1)

HSP 1 Score: 144.8 bits (364), Expect = 6.8e-35
Identity = 74/139 (53.24%), Postives = 97/139 (69.78%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+K+L  L  ++RE+ VN
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYM-PSELPPNYSSYMA 133
           SL +EAEARLRDPV GCV LIS LQ RL+ +  +L  A++EL++Y+ P  + P    +  
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPILQPHFM 125

Query: 134 SKLPPNWSYMASKLRPNSS 152
           S LPP         RP+SS
Sbjct: 126 S-LPP------QPQRPSSS 137

[Close]

BLAST of MELO3C007098 vs. TAIR10
Match: AT1G65620.1 (AT1G65620.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33
Identity = 64/105 (60.95%), Postives = 81/105 (77.14%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+K+L  L   +RE+ VN
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSY 119
           SL +EA+ RLRDPV GCV +IS LQ +L+ LQ +LS A+ ELS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of MELO3C007098 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 134.4 bits (337), Expect = 9.2e-32
Identity = 64/122 (52.46%), Postives = 83/122 (68.03%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCASCK LRR+C  DCIFAP+FP D P KF +VH+++GASNVSK+L+ L   +R + VN
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSELPPNYSSYMAS 133
           SLVFEA AR+RDPV GCV  IS LQ+++  LQ +L++A+ E+        P   S +   
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQVL 126

Query: 134 KL 136
           +L
Sbjct: 127 EL 128

[Close]

BLAST of MELO3C007098 vs. TAIR10
Match: AT5G63090.2 (AT5G63090.2 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 132.9 bits (333), Expect = 2.7e-31
Identity = 63/108 (58.33%), Postives = 78/108 (72.22%), Query Frame = 1


Query: 11  TYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREE 70
           +Y SPCA+CKFLRRKC   CIFAP+FP ++P KF  VH+I+GASNV+K+L  L   +RE+
Sbjct: 7   SYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQRED 66

Query: 71  TVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSY 119
            VNSL +EAEAR+RDPV GCV  IS LQ ++  LQ EL  A  +L+ Y
Sbjct: 67  AVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of MELO3C007098 vs. NCBI nr
Match: gi|659078163|ref|XP_008439580.1| (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo])

HSP 1 Score: 490.7 bits (1262), Expect = 1.4e-135
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1


Query: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60
           MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL
Sbjct: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60

Query: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120
           KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP
Sbjct: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120

Query: 121 SELPPNYSSYMASKLPPNWSYMASKLRPNSSYMASKLRPNLSYMISELLPKWPGESSTSQ 180
           SELPPNYSSYMASKLPPNWSYMASKLRPNSSYMASKLRPNLSYMISELLPKWPGESSTSQ
Sbjct: 121 SELPPNYSSYMASKLPPNWSYMASKLRPNSSYMASKLRPNLSYMISELLPKWPGESSTSQ 180

Query: 181 RPMMEGQSSSQRVDGFGTTNYYGINNDDDRRHVVFQHPVTTTEQLLPATEQPPSQDSIDF 240
           RPMMEGQSSSQRVDGFGTTNYYGINNDDDRRHVVFQHPVTTTEQLLPATEQPPSQDSIDF
Sbjct: 181 RPMMEGQSSSQRVDGFGTTNYYGINNDDDRRHVVFQHPVTTTEQLLPATEQPPSQDSIDF 240

[Close]

BLAST of MELO3C007098 vs. NCBI nr
Match: gi|778722590|ref|XP_004134907.2| (PREDICTED: LOB domain-containing protein 4-like [Cucumis sativus])

HSP 1 Score: 343.2 bits (879), Expect = 3.7e-91
Identity = 175/240 (72.92%), Postives = 192/240 (80.00%), Query Frame = 1


Query: 1   MSSFNSQPQKTYGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKIL 60
           MSS NSQ QK YGSPCASCKFLRRKCD DCIFAP+FPADQP+KFEVVHRIYGASNVSKIL
Sbjct: 1   MSSSNSQSQKIYGSPCASCKFLRRKCDVDCIFAPYFPADQPQKFEVVHRIYGASNVSKIL 60

Query: 61  KALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMP 120
           KA RYDEREETV SLVFEAEARL DPV GCVA I+ LQ RLQ LQTEL+I +++L SYM 
Sbjct: 61  KASRYDEREETVKSLVFEAEARLEDPVHGCVAFIAGLQQRLQRLQTELAIVQQQLLSYMA 120

Query: 121 SELPPNYSSYMASKLPPNWSYMASKLRPNSSYMASKLRPNLSYMISELLPKWPGESSTSQ 180
           S+LP                       PNSSYMAS+L PN SYM+SELLPKWP ESS SQ
Sbjct: 121 SQLP-----------------------PNSSYMASELPPNSSYMLSELLPKWPRESSLSQ 180

Query: 181 RPMMEGQSSSQRVDGFGTTNYYGINNDDDRRHVVFQHPVTTTEQLLPATEQPPSQDSIDF 240
           +PMME QSS +RVDG+GTTNYYGIN DDD+RHVV QHP+ TTEQ+LPATEQPPS+DS DF
Sbjct: 181 QPMMEDQSSCRRVDGYGTTNYYGINTDDDKRHVVRQHPI-TTEQVLPATEQPPSKDSTDF 216

[Close]

BLAST of MELO3C007098 vs. NCBI nr
Match: gi|727506395|ref|XP_010429315.1| (PREDICTED: LOB domain-containing protein 10 [Camelina sativa])

HSP 1 Score: 154.5 bits (389), Expect = 2.4e-34
Identity = 88/199 (44.22%), Postives = 117/199 (58.79%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           +PCA+CK LRRKC  +C+FAP+FP   P+KF  VHR++GASNV+KIL  L  D+REETVN
Sbjct: 4   TPCAACKLLRRKCTQECVFAPYFPPTNPQKFICVHRVFGASNVTKILNDLHPDQREETVN 63

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSE--LPPNYSSYM 133
           SL +EAEAR+RDP+ GCV LIS LQ  L+ +Q +L  A+ ELS YM  +  +PP Y   +
Sbjct: 64  SLFYEAEARIRDPIYGCVGLISFLQQYLKKVQQDLVTAKEELSGYMGPDAVIPPPYLPPL 123

Query: 134 ASKLPPNWSYMASKLRPNSSYMASKL---RPNLSYMISELLPKWPGESSTSQRPMMEGQS 193
            +  PPN+      + P        L    PNLS        +    +S +QR       
Sbjct: 124 GNNPPPNFMMSMEGMPPGVIPQGEPLMIREPNLSQQHQPQDDQLQFMASDAQR---MAAM 183

Query: 194 SSQRVDGFGTTNYYGINND 208
             +R D  G  N YGI+N+
Sbjct: 184 MMERGDQQGMFNGYGIDNN 199

[Close]

BLAST of MELO3C007098 vs. NCBI nr
Match: gi|645272728|ref|XP_008241536.1| (PREDICTED: LOB domain-containing protein 36 [Prunus mume])

HSP 1 Score: 153.3 bits (386), Expect = 5.4e-34
Identity = 87/183 (47.54%), Postives = 119/183 (65.03%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+KIL  L   +RE+ VN
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKILNELNATQREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSELPPNYSSYMAS 133
           SL +EAEARLRDPV GCV LIS LQ RL+ +Q +L  A++EL++YM  +        M S
Sbjct: 66  SLAYEAEARLRDPVYGCVGLISILQQRLKQVQADLYNAKKELATYMGPQA-------MLS 125

Query: 134 KLPPNWSYMASKLRPNSSYMASKLRPNLSYMISELLPKWPGESSTSQRPMMEGQSSSQRV 193
            L P  +YM  +L+ N+S  +S + P   Y +S ++    G +S  Q  + E Q   Q+ 
Sbjct: 126 ILQPPPTYMPQQLQGNAS--SSAVSP---YTMSPMMGISTGPTS-GQLMIREPQQQQQQQ 175

Query: 194 DGF 197
             F
Sbjct: 186 QMF 175

[Close]

BLAST of MELO3C007098 vs. NCBI nr
Match: gi|595814071|ref|XP_007203679.1| (hypothetical protein PRUPE_ppa026393mg [Prunus persica])

HSP 1 Score: 152.9 bits (385), Expect = 7.1e-34
Identity = 87/183 (47.54%), Postives = 119/183 (65.03%), Query Frame = 1


Query: 14  SPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVSKILKALRYDEREETVN 73
           SPCA+CKFLRRKC  +C+FAP+FP DQP+KF  VH+++GASNV+KIL  L   +RE+ VN
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKILNELNATQREDAVN 65

Query: 74  SLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSSYMPSELPPNYSSYMAS 133
           SL +EAEARLRDPV GCV LIS LQ RL+ +Q +L  A++EL++YM  +        M S
Sbjct: 66  SLAYEAEARLRDPVYGCVGLISILQQRLKQVQADLYNAKKELATYMGPQA-------MLS 125

Query: 134 KLPPNWSYMASKLRPNSSYMASKLRPNLSYMISELLPKWPGESSTSQRPMMEGQSSSQRV 193
            L P  +YM  +L+ N+S  +S + P   Y +S ++    G +S  Q  + E Q   Q+ 
Sbjct: 126 ILQPPPTYMPQQLQGNAS--SSAVSP---YTMSPMMGIPTGPTS-GQLMIREPQQQQQQQ 175

Query: 194 DGF 197
             F
Sbjct: 186 QMF 175

The following BLAST results are available for this feature:

BLAST of MELO3C007098 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LBD10_ARATH	1.1e-34	41.21	LOB domain-containing protein 10 OS=Arabidopsis thaliana GN=LBD10 PE=2 SV=1	[more]
LBD36_ARATH	1.2e-33	53.24	LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1	[more]
LBD6_ORYSI	1.7e-32	62.26	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica GN=LBD6 PE=3 SV=1	[more]
LBD6_ORYSJ	1.7e-32	62.26	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=LBD6 PE=2 SV=...	[more]
LBD6_ARATH	2.3e-32	60.95	LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1	[more]

BLAST of MELO3C007098 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIS2_CUCSA	2.6e-91	72.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525240 PE=4 SV=1	[more]
M5W6J8_PRUPE	4.9e-34	47.54	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026393mg PE=4 SV=1	[more]
V4K019_EUTSA	7.1e-33	53.10	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10004535mg PE=4 SV=1	[more]
A0A118K1C5_CYNCS	2.7e-32	41.67	Lateral organ boundaries domain-containing protein OS=Cynara cardunculus var. sc...	[more]
A0A0J8BSE4_BETVU	2.7e-32	61.06	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194110 PE=4 S...	[more]

BLAST of MELO3C007098 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23660.1	6.1e-36	41.21	LOB domain-containing protein 10	[more]
AT5G66870.1	6.8e-35	53.24	ASYMMETRIC LEAVES 2-like 1	[more]
AT1G65620.1	1.3e-33	60.95	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G30130.1	9.2e-32	52.46	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.2	2.7e-31	58.33	Lateral organ boundaries (LOB) domain family protein	[more]

BLAST of MELO3C007098 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659078163\|ref\|XP_008439580.1\|	1.4e-135	100.00	PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]	[more]
gi\|778722590\|ref\|XP_004134907.2\|	3.7e-91	72.92	PREDICTED: LOB domain-containing protein 4-like [Cucumis sativus]	[more]
gi\|727506395\|ref\|XP_010429315.1\|	2.4e-34	44.22	PREDICTED: LOB domain-containing protein 10 [Camelina sativa]	[more]
gi\|645272728\|ref\|XP_008241536.1\|	5.4e-34	47.54	PREDICTED: LOB domain-containing protein 36 [Prunus mume]	[more]
gi\|595814071\|ref\|XP_007203679.1\|	7.1e-34	47.54	hypothetical protein PRUPE_ppa026393mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0048441	petal development
biological_process	GO:0009954	proximal/distal pattern formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU58128	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007098T1	MELO3C007098T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU58128	MU58128	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	DUF260	coord: 15..112 score: 9.4
IPR004883	Lateral organ boundaries, LOB	PROFILE	PS50891	LOB	coord: 14..115 score: 25
None	No IPR available	unknown	Coil	Coil	coord: 94..114 scor
None	No IPR available	PANTHER	PTHR31301	FAMILY NOT NAMED	coord: 14..118 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007098	Csa6G525240	Cucumber (Chinese Long) v2	cumeB507
MELO3C007098	Cla009805	Watermelon (97103) v1	mewmB572
MELO3C007098	Cla97C01G024940	Watermelon (97103) v2	mewmbB515
MELO3C007098	Bhi03G000115	Wax gourd	mewgoB650
MELO3C007098	CSPI06G36660	Wild cucumber (PI 183967)	cpimeB512
MELO3C007098	Cucsa.048040	Cucumber (Gy14) v1	cgymeB027
MELO3C007098	Lsi01G001110	Bottle gourd (USVL1VR-Ls)	lsimeB149
MELO3C007098	CsGy6G035990	Cucumber (Gy14) v2	cgybmeB445
MELO3C007098	CsaV3_6G052130	Cucumber (Chinese Long) v3	cucmeB520

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007098	Silver-seed gourd	carmeB0301
MELO3C007098	Silver-seed gourd	carmeB0725
MELO3C007098	Cucurbita maxima (Rimu)	cmameB211
MELO3C007098	Cucurbita maxima (Rimu)	cmameB618
MELO3C007098	Cucurbita maxima (Rimu)	cmameB798
MELO3C007098	Cucurbita moschata (Rifu)	cmomeB195
MELO3C007098	Cucurbita moschata (Rifu)	cmomeB606
MELO3C007098	Cucurbita moschata (Rifu)	cmomeB782
MELO3C007098	Watermelon (Charleston Gray)	mewcgB515
MELO3C007098	Watermelon (Charleston Gray)	mewcgB523
MELO3C007098	Watermelon (97103) v1	mewmB562
MELO3C007098	Cucurbita pepo (Zucchini)	cpemeB061
MELO3C007098	Cucurbita pepo (Zucchini)	cpemeB457
MELO3C007098	Cucurbita pepo (Zucchini)	cpemeB485
MELO3C007098	Bottle gourd (USVL1VR-Ls)	lsimeB228